RNA–Protein interactions for RNA: ENST00000543233.2

CDH4-201, Transcript of cadherin 4, humanhuman

TSL 2 BASIC

Gene CDH4, Length 3,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-201ENST00000543233 A4D1N5 150 aa9.25□□□□□ -0.93
CDH4-201ENST00000543233 CCDC179H3BU77 68 aa9.25□□□□□ -0.93
CDH4-201ENST00000543233 CT45A6P0DMU7 189 aa9.25□□□□□ -0.93
CDH4-201ENST00000543233 CT45A5P0DMU8 189 aa9.25□□□□□ -0.93
CDH4-201ENST00000543233 CT45A7P0DMV0 189 aa9.25□□□□□ -0.93
CDH4-201ENST00000543233 KRTAP27-1Q3LI81 207 aa9.25□□□□□ -0.93
CDH4-201ENST00000543233 CT45A1Q5HYN5 189 aa9.25□□□□□ -0.93
CDH4-201ENST00000543233 PLA2G2CQ5R387 149 aa9.25□□□□□ -0.93
CDH4-201ENST00000543233 CT45A3Q8NHU0 189 aa9.25□□□□□ -0.93
CDH4-201ENST00000543233 LRRC29Q8WV35 223 aa9.25□□□□□ -0.93
CDH4-201ENST00000543233 TEX50A0A1B0GTY4 177 aa9.24□□□□□ -0.93
CDH4-201ENST00000543233 A0A1W2PRD5 423 aa9.24□□□□□ -0.93
CDH4-201ENST00000543233 A0A1W2PRF3 423 aa9.24□□□□□ -0.93
CDH4-201ENST00000543233 A0A1W2PRM7 423 aa9.24□□□□□ -0.93
CDH4-201ENST00000543233 GAGE13Q4V321 117 aa9.24□□□□□ -0.93
CDH4-201ENST00000543233 PDLIM3Q53GG5 364 aaPredicted RBP9.24□□□□□ -0.93
CDH4-201ENST00000543233 FDCSPQ8NFU4 85 aa9.24□□□□□ -0.93
CDH4-201ENST00000543233 MPC1Q9Y5U8 109 aa9.24□□□□□ -0.93
CDH4-201ENST00000543233 ADGRG4Q8IZF6 3080 aa9.24□□□□□ -0.93
CDH4-201ENST00000543233 IZUMO1RA6ND01 250 aa9.24□□□□□ -0.93
CDH4-201ENST00000543233 FGF12P61328 243 aa9.24□□□□□ -0.93
CDH4-201ENST00000543233 C3orf56Q8N813 242 aa9.24□□□□□ -0.93
CDH4-201ENST00000543233 H1FXQ92522 213 aaKnown RBP9.24□□□□□ -0.93
CDH4-201ENST00000543233 PKIBQ9C010 78 aa9.24□□□□□ -0.93
CDH4-201ENST00000543233 VPREB3Q9UKI3 123 aa9.24□□□□□ -0.93
CDH4-201ENST00000543233 IGKV1-6A0A0C4DH72 117 aa9.23□□□□□ -0.93
CDH4-201ENST00000543233 GAGE12JA6NER3 117 aa9.23□□□□□ -0.93
CDH4-201ENST00000543233 RRHO14718 337 aa9.23□□□□□ -0.93
CDH4-201ENST00000543233 GAGE7O76087 117 aa9.23□□□□□ -0.93
CDH4-201ENST00000543233 GAGE12FP0CL80 117 aa9.23□□□□□ -0.93
CDH4-201ENST00000543233 GAGE12GP0CL81 117 aa9.23□□□□□ -0.93
CDH4-201ENST00000543233 GAGE12IP0CL82 117 aa9.23□□□□□ -0.93
CDH4-201ENST00000543233 REG1BP48304 166 aa9.23□□□□□ -0.93
CDH4-201ENST00000543233 GAGE4Q13068 117 aa9.23□□□□□ -0.93
CDH4-201ENST00000543233 TMEM211Q6ICI0 200 aa9.23□□□□□ -0.93
CDH4-201ENST00000543233 FAM53AQ6NSI3 398 aaPredicted RBP9.23□□□□□ -0.93
CDH4-201ENST00000543233 ZNF826PQ6ZT77 177 aa9.23□□□□□ -0.93
CDH4-201ENST00000543233 MDS2Q8NDY4 140 aa9.23□□□□□ -0.93
CDH4-201ENST00000543233 WT1P19544 449 aaPredicted RBP9.23□□□□□ -0.93
CDH4-201ENST00000543233 PSG5Q15238 335 aa9.23□□□□□ -0.93
CDH4-201ENST00000543233 RNPS1Q15287 305 aaKnown RBP9.23□□□□□ -0.93
CDH4-201ENST00000543233 FAM120AOSQ5T036 256 aa9.23□□□□□ -0.93
CDH4-201ENST00000543233 FAM169BQ8N8A8 192 aa9.23□□□□□ -0.93
CDH4-201ENST00000543233 OR8A1Q8NGG7 326 aa9.23□□□□□ -0.93
CDH4-201ENST00000543233 PLPPR2Q96GM1 343 aa9.23□□□□□ -0.93
CDH4-201ENST00000543233 VCX2Q9H322 139 aa9.23□□□□□ -0.93
CDH4-201ENST00000543233 ZNF355PQ9NSJ1 428 aa9.23□□□□□ -0.93
CDH4-201ENST00000543233 CXorf1O96002 111 aa9.22□□□□□ -0.93
CDH4-201ENST00000543233 COL8A2P25067 703 aa9.22□□□□□ -0.93
CDH4-201ENST00000543233 OR5AL1P0C617 328 aa9.22□□□□□ -0.93
CDH4-201ENST00000543233 GCSAMQ8N6F7 178 aa9.22□□□□□ -0.93
CDH4-201ENST00000543233 RAX2Q96IS3 184 aa9.22□□□□□ -0.93
CDH4-201ENST00000543233 TM2D2Q9BX73 214 aa9.22□□□□□ -0.93
CDH4-201ENST00000543233 OBP2BQ9NPH6 170 aa9.22□□□□□ -0.93
CDH4-201ENST00000543233 TRAV5A0A0B4J249 113 aa9.22□□□□□ -0.93
CDH4-201ENST00000543233 TRAV24A0A0B4J272 114 aa9.22□□□□□ -0.93
CDH4-201ENST00000543233 TNFRSF13BO14836 293 aaPredicted RBP9.22□□□□□ -0.93
CDH4-201ENST00000543233 CRXO43186 299 aaPredicted RBP9.22□□□□□ -0.93
CDH4-201ENST00000543233 ZNF137PP52743 207 aa9.22□□□□□ -0.93
CDH4-201ENST00000543233 ZNF808Q8N4W9 903 aaPredicted RBP9.22□□□□□ -0.93
CDH4-201ENST00000543233 ABHD17AQ96GS6 310 aa9.22□□□□□ -0.93
CDH4-201ENST00000543233 CDIP1Q9H305 208 aa9.22□□□□□ -0.93
CDH4-201ENST00000543233 KLK10O43240 276 aa9.21□□□□□ -0.93
CDH4-201ENST00000543233 IGKV1-5P01602 117 aa9.21□□□□□ -0.93
CDH4-201ENST00000543233 FXYD2P54710 66 aa9.21□□□□□ -0.93
CDH4-201ENST00000543233 DEFB109BQ30KR1 87 aa9.21□□□□□ -0.93
CDH4-201ENST00000543233 FAM162BQ5T6X4 162 aa9.21□□□□□ -0.93
CDH4-201ENST00000543233 SLC35E4Q6ICL7 350 aa9.21□□□□□ -0.93
CDH4-201ENST00000543233 BCL6BQ8N143 479 aaPredicted RBP9.21□□□□□ -0.93
CDH4-201ENST00000543233 TMEM178AQ8NBL3 297 aa9.21□□□□□ -0.93
CDH4-201ENST00000543233 SSMEM1Q8WWF3 244 aa9.21□□□□□ -0.93
CDH4-201ENST00000543233 FAM168AQ92567 244 aa9.21□□□□□ -0.93
CDH4-201ENST00000543233 ZDHHC16Q969W1 377 aa9.21□□□□□ -0.93
CDH4-201ENST00000543233 UBTD1Q9HAC8 227 aa9.21□□□□□ -0.93
CDH4-201ENST00000543233 HEYLQ9NQ87 328 aaPredicted RBP9.21□□□□□ -0.93
CDH4-201ENST00000543233 WNT9BO14905 357 aa9.21□□□□□ -0.94
CDH4-201ENST00000543233 SMAD7O15105 426 aaKnown RBP9.21□□□□□ -0.94
CDH4-201ENST00000543233 TUSC2O75896 110 aa9.21□□□□□ -0.94
CDH4-201ENST00000543233 CSN1S1P47710 185 aa9.21□□□□□ -0.94
CDH4-201ENST00000543233 TBC1D28Q2M2D7 210 aa9.21□□□□□ -0.94
CDH4-201ENST00000543233 GDF5OSQ5U4N7 250 aa9.21□□□□□ -0.94
CDH4-201ENST00000543233 TMEM14EPQ6UXP3 125 aa9.21□□□□□ -0.94
CDH4-201ENST00000543233 URB1-AS1Q96HZ7 61 aa9.21□□□□□ -0.94
CDH4-201ENST00000543233 PRELID3AQ96N28 172 aa9.21□□□□□ -0.94
CDH4-201ENST00000543233 C18orf15Q96N68 181 aa9.21□□□□□ -0.94
CDH4-201ENST00000543233 TXNDC17Q9BRA2 123 aa9.21□□□□□ -0.94
CDH4-201ENST00000543233 DLL3Q9NYJ7 618 aa9.21□□□□□ -0.94
CDH4-201ENST00000543233 FABP5P3A8MUU1 101 aa9.2□□□□□ -0.94
CDH4-201ENST00000543233 C9JCJ5 164 aa9.2□□□□□ -0.94
CDH4-201ENST00000543233 ZG16O60844 167 aa9.2□□□□□ -0.94
CDH4-201ENST00000543233 IGHV1-2P23083 117 aa9.2□□□□□ -0.94
CDH4-201ENST00000543233 KLRD1Q13241 179 aa9.2□□□□□ -0.94
CDH4-201ENST00000543233 MIC13Q5XKP0 118 aa9.2□□□□□ -0.94
CDH4-201ENST00000543233 OSTCQ9NRP0 149 aa9.2□□□□□ -0.94
CDH4-201ENST00000543233 INSIG2Q9Y5U4 225 aa9.2□□□□□ -0.94
CDH4-201ENST00000543233 TLN1Q9Y490 2541 aaKnown RBP9.2□□□□□ -0.94
CDH4-201ENST00000543233 ACTL6BO94805 426 aa9.2□□□□□ -0.94
CDH4-201ENST00000543233 IGKV1-39P01597 117 aa9.2□□□□□ -0.94
CDH4-201ENST00000543233 IGKV1D-39P04432 117 aa9.2□□□□□ -0.94
CDH4-201ENST00000543233 GCHFRP30047 84 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms