RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 MYO15AQ9UKN7 3530 aa13.14□□□□□ -0.31
VARS2-212ENST00000542001 A0A1B0GW64 132 aa13.14□□□□□ -0.31
VARS2-212ENST00000542001 MBD3L4A6NDZ8 208 aaPredicted RBP13.14□□□□□ -0.31
VARS2-212ENST00000542001 MBD3L3A6NE82 208 aaPredicted RBP13.14□□□□□ -0.31
VARS2-212ENST00000542001 OR2T8A6NH00 312 aa13.14□□□□□ -0.31
VARS2-212ENST00000542001 MBD3L5A6NJ08 208 aaPredicted RBP13.14□□□□□ -0.31
VARS2-212ENST00000542001 NPIPB11E5RHQ5 1161 aa13.14□□□□□ -0.31
VARS2-212ENST00000542001 PFN1P07737 140 aaKnown RBP13.14□□□□□ -0.31
VARS2-212ENST00000542001 NMUP48645 174 aa13.14□□□□□ -0.31
VARS2-212ENST00000542001 ZNF138P52744 262 aa13.14□□□□□ -0.31
VARS2-212ENST00000542001 MBD3L2Q8NHZ7 208 aaPredicted RBP13.14□□□□□ -0.31
VARS2-212ENST00000542001 MAP1LC3CQ9BXW4 147 aa13.14□□□□□ -0.31
VARS2-212ENST00000542001 FRYLO94915 3013 aa13.14□□□□□ -0.31
VARS2-212ENST00000542001 GPR183P32249 361 aa13.13□□□□□ -0.31
VARS2-212ENST00000542001 FXYD7P58549 80 aa13.13□□□□□ -0.31
VARS2-212ENST00000542001 PLA2G2CQ5R387 149 aa13.13□□□□□ -0.31
VARS2-212ENST00000542001 DPM3Q9P2X0 92 aa13.13□□□□□ -0.31
VARS2-212ENST00000542001 FREM2Q5SZK8 3169 aa13.13□□□□□ -0.31
VARS2-212ENST00000542001 TMEM189A5PLL7 270 aa13.13□□□□□ -0.31
VARS2-212ENST00000542001 LMO1P25800 156 aa13.13□□□□□ -0.31
VARS2-212ENST00000542001 MSMPQ1L6U9 139 aa13.13□□□□□ -0.31
VARS2-212ENST00000542001 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.13□□□□□ -0.31
VARS2-212ENST00000542001 DEFB104AQ8WTQ1 72 aa13.13□□□□□ -0.31
VARS2-212ENST00000542001 SCRT1Q9BWW7 348 aa13.13□□□□□ -0.31
VARS2-212ENST00000542001 PF4V1P10720 104 aa13.13□□□□□ -0.31
VARS2-212ENST00000542001 Q6ZS92 163 aa13.13□□□□□ -0.31
VARS2-212ENST00000542001 C15orf65H3BRN8 121 aa13.12□□□□□ -0.31
VARS2-212ENST00000542001 TMEM178BH3BS89 294 aa13.12□□□□□ -0.31
VARS2-212ENST00000542001 GOSR1O95249 250 aa13.12□□□□□ -0.31
VARS2-212ENST00000542001 IGKV3-20P01619 116 aa13.12□□□□□ -0.31
VARS2-212ENST00000542001 ZNF664Q8N3J9 261 aa13.12□□□□□ -0.31
VARS2-212ENST00000542001 ELOVL5Q9NYP7 299 aa13.12□□□□□ -0.31
VARS2-212ENST00000542001 C1RLQ9NZP8 487 aa13.12□□□□□ -0.31
VARS2-212ENST00000542001 NUP210LQ5VU65 1888 aa13.12□□□□□ -0.31
VARS2-212ENST00000542001 MGAQ8IWI9 3026 aa13.12□□□□□ -0.31
VARS2-212ENST00000542001 GGCTO75223 188 aaKnown RBP13.12□□□□□ -0.31
VARS2-212ENST00000542001 CKS2P33552 79 aa13.12□□□□□ -0.31
VARS2-212ENST00000542001 C17orf58Q2M2W7 97 aa13.12□□□□□ -0.31
VARS2-212ENST00000542001 FAM162BQ5T6X4 162 aa13.12□□□□□ -0.31
VARS2-212ENST00000542001 CIARTQ8N365 385 aaPredicted RBP13.12□□□□□ -0.31
VARS2-212ENST00000542001 POLQO75417 2590 aa13.12□□□□□ -0.31
VARS2-212ENST00000542001 PMS2P5A8MQ11 134 aa13.11□□□□□ -0.31
VARS2-212ENST00000542001 M0R3E3 92 aa13.11□□□□□ -0.31
VARS2-212ENST00000542001 IGHV2-70P01814 119 aa13.11□□□□□ -0.31
VARS2-212ENST00000542001 TDGF1P13385 188 aa13.11□□□□□ -0.31
VARS2-212ENST00000542001 MFAP4P55083 255 aa13.11□□□□□ -0.31
VARS2-212ENST00000542001 RELQ04864 619 aaPredicted RBP13.11□□□□□ -0.31
VARS2-212ENST00000542001 MEF2CQ06413 473 aaPredicted RBP13.11□□□□□ -0.31
VARS2-212ENST00000542001 Q8NFD4 153 aa13.11□□□□□ -0.31
VARS2-212ENST00000542001 C5orf30Q96GV9 206 aa13.11□□□□□ -0.31
VARS2-212ENST00000542001 IGHV2-5P01817 119 aa13.11□□□□□ -0.31
VARS2-212ENST00000542001 COX19Q49B96 90 aa13.11□□□□□ -0.31
VARS2-212ENST00000542001 IFITM10A6NMD0 228 aa13.11□□□□□ -0.31
VARS2-212ENST00000542001 H0YJW9 148 aa13.11□□□□□ -0.31
VARS2-212ENST00000542001 MGPP08493 103 aa13.11□□□□□ -0.31
VARS2-212ENST00000542001 MRPL32Q9BYC8 188 aaKnown RBP13.11□□□□□ -0.31
VARS2-212ENST00000542001 CORTO00230 105 aa13.1□□□□□ -0.31
VARS2-212ENST00000542001 IGHV3-11P01762 117 aa13.1□□□□□ -0.31
VARS2-212ENST00000542001 PSG1P11464 419 aa13.1□□□□□ -0.31
VARS2-212ENST00000542001 CACNG8Q8WXS5 425 aa13.1□□□□□ -0.31
VARS2-212ENST00000542001 ZNF672Q499Z4 452 aaPredicted RBP13.1□□□□□ -0.31
VARS2-212ENST00000542001 ZNF841Q6ZN19 808 aa13.1□□□□□ -0.31
VARS2-212ENST00000542001 LYPD6BQ8NI32 183 aa13.1□□□□□ -0.31
VARS2-212ENST00000542001 TCRBV4S1A1TA0A5B7 111 aa13.1□□□□□ -0.31
VARS2-212ENST00000542001 IGHV1-8P0DP01 117 aa13.1□□□□□ -0.31
VARS2-212ENST00000542001 RNASE2P10153 161 aaKnown RBP13.1□□□□□ -0.31
VARS2-212ENST00000542001 SPANXN1Q5VSR9 72 aa13.1□□□□□ -0.31
VARS2-212ENST00000542001 DKK4Q9UBT3 224 aa13.1□□□□□ -0.31
VARS2-212ENST00000542001 CEP192Q8TEP8 1941 aa13.1□□□□□ -0.31
VARS2-212ENST00000542001 BTF3P20290 206 aaKnown RBP13.09□□□□□ -0.31
VARS2-212ENST00000542001 NUDT10Q8NFP7 164 aa13.09□□□□□ -0.31
VARS2-212ENST00000542001 RAB37Q96AX2 223 aa13.09□□□□□ -0.31
VARS2-212ENST00000542001 NUDT11Q96G61 164 aa13.09□□□□□ -0.31
VARS2-212ENST00000542001 TMEM242Q9NWH2 141 aa13.09□□□□□ -0.31
VARS2-212ENST00000542001 F11RQ9Y624 299 aaKnown RBP13.09□□□□□ -0.31
VARS2-212ENST00000542001 HBBP68871 147 aa13.09□□□□□ -0.31
VARS2-212ENST00000542001 TM4SF20Q53R12 229 aa13.09□□□□□ -0.31
VARS2-212ENST00000542001 DMRTC2Q8IXT2 367 aaPredicted RBP13.09□□□□□ -0.31
VARS2-212ENST00000542001 GPR82Q96P67 336 aa13.09□□□□□ -0.31
VARS2-212ENST00000542001 EPDR1Q9UM22 224 aa13.09□□□□□ -0.31
VARS2-212ENST00000542001 IGHV2-26A0A0B4J1V2 119 aa13.09□□□□□ -0.31
VARS2-212ENST00000542001 E7EQL1 145 aa13.09□□□□□ -0.31
VARS2-212ENST00000542001 IGLV2-14P01704 120 aa13.09□□□□□ -0.31
VARS2-212ENST00000542001 LOXL3P58215 753 aa13.09□□□□□ -0.31
VARS2-212ENST00000542001 TEX45Q8NA69 505 aa13.09□□□□□ -0.31
VARS2-212ENST00000542001 CD99P14209 185 aa13.08□□□□□ -0.31
VARS2-212ENST00000542001 CA7P43166 264 aa13.08□□□□□ -0.31
VARS2-212ENST00000542001 VDAC2P45880 294 aaPredicted RBP13.08□□□□□ -0.31
VARS2-212ENST00000542001 CCDC144NLQ6NUI1 221 aa13.08□□□□□ -0.31
VARS2-212ENST00000542001 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.08□□□□□ -0.31
VARS2-212ENST00000542001 SLC25A48Q6ZT89 311 aaKnown RBP13.08□□□□□ -0.31
VARS2-212ENST00000542001 FBXL7Q9UJT9 491 aa13.08□□□□□ -0.32
VARS2-212ENST00000542001 A0A1W2PPI3 338 aa13.08□□□□□ -0.32
VARS2-212ENST00000542001 NPPCP23582 126 aa13.08□□□□□ -0.32
VARS2-212ENST00000542001 TMPRSS3P57727 454 aa13.08□□□□□ -0.32
VARS2-212ENST00000542001 SSBP2P81877 361 aaPredicted RBP13.08□□□□□ -0.32
VARS2-212ENST00000542001 COL5A1-AS1Q5SY13 56 aa13.08□□□□□ -0.32
VARS2-212ENST00000542001 NDUFAF3Q9BU61 184 aa13.08□□□□□ -0.32
VARS2-212ENST00000542001 C19orf24Q9BVV8 132 aa13.08□□□□□ -0.32
VARS2-212ENST00000542001 MAP1AP78559 2803 aaPredicted RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms