RNA–Protein interactions for RNA: ENST00000541687.5

GCFC2-211, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 2 BASIC

Gene GCFC2, Length 4,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-211ENST00000541687 PET117Q6UWS5 81 aa11.87□□□□□ -0.51
GCFC2-211ENST00000541687 FOXA2Q9Y261 457 aaPredicted RBP11.87□□□□□ -0.51
GCFC2-211ENST00000541687 TRAV8-6A0A0B4J262 113 aa11.87□□□□□ -0.51
GCFC2-211ENST00000541687 TMEM78Q5T7P6 136 aa11.87□□□□□ -0.51
GCFC2-211ENST00000541687 CACNG8Q8WXS5 425 aa11.87□□□□□ -0.51
GCFC2-211ENST00000541687 CDC42EP3Q9UKI2 254 aa11.87□□□□□ -0.51
GCFC2-211ENST00000541687 WT1P19544 449 aaPredicted RBP11.87□□□□□ -0.51
GCFC2-211ENST00000541687 APOBEC3AP31941 199 aaPredicted RBP11.87□□□□□ -0.51
GCFC2-211ENST00000541687 MEF2CQ06413 473 aaPredicted RBP11.87□□□□□ -0.51
GCFC2-211ENST00000541687 TMEM200BQ69YZ2 307 aa11.87□□□□□ -0.51
GCFC2-211ENST00000541687 NRN1Q9NPD7 142 aa11.87□□□□□ -0.51
GCFC2-211ENST00000541687 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.87□□□□□ -0.51
GCFC2-211ENST00000541687 MMP23AO75900 390 aa11.87□□□□□ -0.51
GCFC2-211ENST00000541687 NDUFAF3Q9BU61 184 aa11.87□□□□□ -0.51
GCFC2-211ENST00000541687 ELOVL5Q9NYP7 299 aa11.87□□□□□ -0.51
GCFC2-211ENST00000541687 DNLZQ5SXM8 178 aa11.86□□□□□ -0.51
GCFC2-211ENST00000541687 OR10AG1Q8NH19 301 aa11.86□□□□□ -0.51
GCFC2-211ENST00000541687 GAFA1Q96PS6 74 aa11.86□□□□□ -0.51
GCFC2-211ENST00000541687 TNFSF13O75888 250 aa11.86□□□□□ -0.51
GCFC2-211ENST00000541687 NEUROG1Q92886 237 aa11.86□□□□□ -0.51
GCFC2-211ENST00000541687 GZMBP10144 247 aa11.86□□□□□ -0.51
GCFC2-211ENST00000541687 BMI1P35226 326 aa11.86□□□□□ -0.51
GCFC2-211ENST00000541687 TAS2R60P59551 318 aa11.86□□□□□ -0.51
GCFC2-211ENST00000541687 KRTAP27-1Q3LI81 207 aa11.86□□□□□ -0.51
GCFC2-211ENST00000541687 LYPD2Q6UXB3 125 aa11.86□□□□□ -0.51
GCFC2-211ENST00000541687 RNASE6Q93091 150 aaKnown RBP11.86□□□□□ -0.51
GCFC2-211ENST00000541687 EML5Q05BV3 1969 aa11.86□□□□□ -0.51
GCFC2-211ENST00000541687 IGHV3OR16-10A0A075B7F0 116 aa11.85□□□□□ -0.51
GCFC2-211ENST00000541687 LY6HO94772 140 aa11.85□□□□□ -0.51
GCFC2-211ENST00000541687 CA7P43166 264 aa11.85□□□□□ -0.51
GCFC2-211ENST00000541687 B9A039 149 aa11.85□□□□□ -0.51
GCFC2-211ENST00000541687 TMEM30BQ3MIR4 351 aa11.85□□□□□ -0.51
GCFC2-211ENST00000541687 ZNF664Q8N3J9 261 aa11.85□□□□□ -0.51
GCFC2-211ENST00000541687 TMEM70Q9BUB7 260 aa11.85□□□□□ -0.51
GCFC2-211ENST00000541687 ANKHD1Q8IWZ3 2542 aaKnown RBP11.85□□□□□ -0.51
GCFC2-211ENST00000541687 NCOR2Q9Y618 2525 aa11.85□□□□□ -0.51
GCFC2-211ENST00000541687 TRBV9A0A0B4J1U6 114 aa11.85□□□□□ -0.51
GCFC2-211ENST00000541687 LIPFP07098 398 aa11.85□□□□□ -0.51
GCFC2-211ENST00000541687 SPRNQ5BIV9 151 aa11.85□□□□□ -0.51
GCFC2-211ENST00000541687 C11orf53Q8IXP5 236 aa11.85□□□□□ -0.51
GCFC2-211ENST00000541687 IGHV3-66A0A0C4DH42 116 aa11.85□□□□□ -0.51
GCFC2-211ENST00000541687 MBD3L4A6NDZ8 208 aaPredicted RBP11.85□□□□□ -0.51
GCFC2-211ENST00000541687 MBD3L3A6NE82 208 aaPredicted RBP11.85□□□□□ -0.51
GCFC2-211ENST00000541687 MBD3L5A6NJ08 208 aaPredicted RBP11.85□□□□□ -0.51
GCFC2-211ENST00000541687 ATP5IP56385 69 aaPredicted RBP11.85□□□□□ -0.51
GCFC2-211ENST00000541687 LOXL3P58215 753 aa11.85□□□□□ -0.51
GCFC2-211ENST00000541687 MBD3L2Q8NHZ7 208 aaPredicted RBP11.85□□□□□ -0.51
GCFC2-211ENST00000541687 Q9H3A6 140 aa11.84□□□□□ -0.51
GCFC2-211ENST00000541687 HBBP68871 147 aa11.84□□□□□ -0.51
GCFC2-211ENST00000541687 ACTL10Q5JWF8 245 aa11.84□□□□□ -0.51
GCFC2-211ENST00000541687 C16orf92Q96LL3 132 aa11.84□□□□□ -0.51
GCFC2-211ENST00000541687 BEX4Q9NWD9 120 aaPredicted RBP11.84□□□□□ -0.51
GCFC2-211ENST00000541687 FAM90A9PA6NNJ1 464 aa11.84□□□□□ -0.51
GCFC2-211ENST00000541687 FOXL1Q12952 345 aa11.84□□□□□ -0.51
GCFC2-211ENST00000541687 RNASEH2CQ8TDP1 164 aaKnown RBP11.84□□□□□ -0.51
GCFC2-211ENST00000541687 TMEM133Q9H2Q1 129 aa11.84□□□□□ -0.51
GCFC2-211ENST00000541687 CCDC168Q8NDH2 2452 aa11.83□□□□□ -0.51
GCFC2-211ENST00000541687 A0A1W2PRE2 83 aa11.83□□□□□ -0.52
GCFC2-211ENST00000541687 C15orf65H3BRN8 121 aa11.83□□□□□ -0.52
GCFC2-211ENST00000541687 UNQ5815/PRO19632Q6UWF5 114 aa11.83□□□□□ -0.52
GCFC2-211ENST00000541687 TCRBV4S1A1TA0A5B7 111 aa11.83□□□□□ -0.52
GCFC2-211ENST00000541687 TMEM136Q6ZRR5 245 aa11.83□□□□□ -0.52
GCFC2-211ENST00000541687 PPP1R27Q86WC6 154 aa11.83□□□□□ -0.52
GCFC2-211ENST00000541687 LOC105371242A0A075B767 164 aa11.83□□□□□ -0.52
GCFC2-211ENST00000541687 A0A0G2JNJ9 132 aa11.83□□□□□ -0.52
GCFC2-211ENST00000541687 Q9UFV3 132 aa11.83□□□□□ -0.52
GCFC2-211ENST00000541687 C10orf142B7Z368 130 aa11.82□□□□□ -0.52
GCFC2-211ENST00000541687 KLF17Q5JT82 389 aaPredicted RBP11.82□□□□□ -0.52
GCFC2-211ENST00000541687 GPR82Q96P67 336 aa11.82□□□□□ -0.52
GCFC2-211ENST00000541687 ASCL2Q99929 193 aa11.82□□□□□ -0.52
GCFC2-211ENST00000541687 MAP1LC3AQ9H492 121 aa11.82□□□□□ -0.52
GCFC2-211ENST00000541687 TMEM160Q9NX00 188 aa11.82□□□□□ -0.52
GCFC2-211ENST00000541687 ZNF256Q9Y2P7 627 aaPredicted RBP11.82□□□□□ -0.52
GCFC2-211ENST00000541687 DOPEY1Q5JWR5 2465 aa11.82□□□□□ -0.52
GCFC2-211ENST00000541687 WNT2P09544 360 aa11.82□□□□□ -0.52
GCFC2-211ENST00000541687 PF4V1P10720 104 aa11.82□□□□□ -0.52
GCFC2-211ENST00000541687 MFAP4P55083 255 aa11.82□□□□□ -0.52
GCFC2-211ENST00000541687 CCDC144NLQ6NUI1 221 aa11.82□□□□□ -0.52
GCFC2-211ENST00000541687 PRDM13Q9H4Q3 707 aa11.82□□□□□ -0.52
GCFC2-211ENST00000541687 IZUMO1RA6ND01 250 aa11.82□□□□□ -0.52
GCFC2-211ENST00000541687 ADIPOQQ15848 244 aa11.82□□□□□ -0.52
GCFC2-211ENST00000541687 OSTCQ9NRP0 149 aa11.82□□□□□ -0.52
GCFC2-211ENST00000541687 EPDR1Q9UM22 224 aa11.82□□□□□ -0.52
GCFC2-211ENST00000541687 VCANP13611 3396 aa11.82□□□□□ -0.52
GCFC2-211ENST00000541687 NUP210LQ5VU65 1888 aa11.82□□□□□ -0.52
GCFC2-211ENST00000541687 VDAC2P45880 294 aaPredicted RBP11.82□□□□□ -0.52
GCFC2-211ENST00000541687 SFTA2Q6UW10 78 aa11.82□□□□□ -0.52
GCFC2-211ENST00000541687 DPM3Q9P2X0 92 aa11.82□□□□□ -0.52
GCFC2-211ENST00000541687 ZNF257Q9Y2Q1 563 aa11.82□□□□□ -0.52
GCFC2-211ENST00000541687 ABCA2Q9BZC7 2435 aa11.81□□□□□ -0.52
GCFC2-211ENST00000541687 TRAV8-1A0A0A6YYK1 113 aa11.81□□□□□ -0.52
GCFC2-211ENST00000541687 IGHV2-70P01814 119 aa11.81□□□□□ -0.52
GCFC2-211ENST00000541687 H0YJW9 148 aa11.81□□□□□ -0.52
GCFC2-211ENST00000541687 PLA2G2CQ5R387 149 aa11.81□□□□□ -0.52
GCFC2-211ENST00000541687 TMEM178BH3BS89 294 aa11.81□□□□□ -0.52
GCFC2-211ENST00000541687 RNASE2P10153 161 aaKnown RBP11.81□□□□□ -0.52
GCFC2-211ENST00000541687 AREGP15514 252 aa11.81□□□□□ -0.52
GCFC2-211ENST00000541687 FAM74A4Q5TZK3 123 aa11.81□□□□□ -0.52
GCFC2-211ENST00000541687 SLC25A48Q6ZT89 311 aaKnown RBP11.81□□□□□ -0.52
GCFC2-211ENST00000541687 PHLDA3Q9Y5J5 127 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms