RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 TIGITQ495A1 244 aa21.6■■□□□ 1.05
CCM2-218ENST00000541586 NECAP1Q8NC96 275 aa21.6■■□□□ 1.05
CCM2-218ENST00000541586 VN1R17PQ8TDU5 208 aa21.6■■□□□ 1.05
CCM2-218ENST00000541586 SCRT1Q9BWW7 348 aa21.6■■□□□ 1.05
CCM2-218ENST00000541586 TMEM231Q9H6L2 316 aa21.6■■□□□ 1.05
CCM2-218ENST00000541586 ANKRD34BA5PLL1 514 aa21.6■■□□□ 1.05
CCM2-218ENST00000541586 RHOBP62745 196 aa21.6■■□□□ 1.05
CCM2-218ENST00000541586 ZNF329Q86UD4 541 aa21.6■■□□□ 1.05
CCM2-218ENST00000541586 PSMB11A5LHX3 300 aa21.59■■□□□ 1.05
CCM2-218ENST00000541586 IGHV3-23P01764 117 aa21.59■■□□□ 1.05
CCM2-218ENST00000541586 GUK1Q16774 197 aa21.59■■□□□ 1.05
CCM2-218ENST00000541586 AWAT1Q58HT5 328 aa21.59■■□□□ 1.05
CCM2-218ENST00000541586 SPATA31B1PQ5VZV4 182 aa21.59■■□□□ 1.05
CCM2-218ENST00000541586 TMEM37Q8WXS4 190 aa21.59■■□□□ 1.05
CCM2-218ENST00000541586 GNG7O60262 68 aa21.58■■□□□ 1.05
CCM2-218ENST00000541586 Q56UQ5 140 aa21.58■■□□□ 1.05
CCM2-218ENST00000541586 TOR2AQ5JU69 321 aa21.58■■□□□ 1.05
CCM2-218ENST00000541586 FAM78BQ5VT40 261 aa21.58■■□□□ 1.05
CCM2-218ENST00000541586 ZNF580Q9UK33 172 aa21.58■■□□□ 1.05
CCM2-218ENST00000541586 A0A1B0GUS0 222 aa21.58■■□□□ 1.04
CCM2-218ENST00000541586 KLHDC1Q8N7A1 406 aa21.58■■□□□ 1.04
CCM2-218ENST00000541586 PBDC1Q9BVG4 233 aa21.58■■□□□ 1.04
CCM2-218ENST00000541586 EIF5A2Q9GZV4 153 aaKnown RBP21.58■■□□□ 1.04
CCM2-218ENST00000541586 DOK5Q9P104 306 aa21.58■■□□□ 1.04
CCM2-218ENST00000541586 CD5P06127 495 aa21.57■■□□□ 1.04
CCM2-218ENST00000541586 OR5G3P0C626 314 aa21.57■■□□□ 1.04
CCM2-218ENST00000541586 PSG1P11464 419 aa21.57■■□□□ 1.04
CCM2-218ENST00000541586 C10orf99Q6UWK7 81 aa21.57■■□□□ 1.04
CCM2-218ENST00000541586 GATAD1Q8WUU5 269 aa21.57■■□□□ 1.04
CCM2-218ENST00000541586 DNAJC4Q9NNZ3 241 aa21.57■■□□□ 1.04
CCM2-218ENST00000541586 TREM1Q9NP99 234 aa21.57■■□□□ 1.04
CCM2-218ENST00000541586 TRAV30A0A087WSZ9 112 aa21.56■■□□□ 1.04
CCM2-218ENST00000541586 FCGR2BP31994 310 aaPredicted RBP21.56■■□□□ 1.04
CCM2-218ENST00000541586 ZNF502Q8TBZ5 544 aa21.56■■□□□ 1.04
CCM2-218ENST00000541586 MDFIQ99750 246 aa21.56■■□□□ 1.04
CCM2-218ENST00000541586 TXN2Q99757 166 aa21.56■■□□□ 1.04
CCM2-218ENST00000541586 TMPRSS5Q9H3S3 457 aa21.56■■□□□ 1.04
CCM2-218ENST00000541586 GNG13Q9P2W3 67 aa21.56■■□□□ 1.04
CCM2-218ENST00000541586 FUT9Q9Y231 359 aa21.56■■□□□ 1.04
CCM2-218ENST00000541586 RBFOX3A6NFN3 312 aa21.55■■□□□ 1.04
CCM2-218ENST00000541586 COX7A2P2O60397 106 aa21.55■■□□□ 1.04
CCM2-218ENST00000541586 STAG3L2P0CL84 134 aa21.55■■□□□ 1.04
CCM2-218ENST00000541586 STAG3L3P0CL85 134 aa21.55■■□□□ 1.04
CCM2-218ENST00000541586 PROK1P58294 105 aa21.55■■□□□ 1.04
CCM2-218ENST00000541586 PATE2Q6UY27 113 aa21.55■■□□□ 1.04
CCM2-218ENST00000541586 MIR17HGQ75NE6 70 aa21.55■■□□□ 1.04
CCM2-218ENST00000541586 OR1L4Q8NGR5 311 aa21.55■■□□□ 1.04
CCM2-218ENST00000541586 NARS2Q96I59 477 aaKnown RBP21.55■■□□□ 1.04
CCM2-218ENST00000541586 RARRES2Q99969 163 aa21.55■■□□□ 1.04
CCM2-218ENST00000541586 H3BUA1 57 aa21.55■■□□□ 1.04
CCM2-218ENST00000541586 BRI3O95415 125 aa21.55■■□□□ 1.04
CCM2-218ENST00000541586 CFHR3Q02985 330 aa21.55■■□□□ 1.04
CCM2-218ENST00000541586 HAGHQ16775 308 aa21.55■■□□□ 1.04
CCM2-218ENST00000541586 PFDN5Q99471 154 aa21.55■■□□□ 1.04
CCM2-218ENST00000541586 OR2T8A6NH00 312 aa21.54■■□□□ 1.04
CCM2-218ENST00000541586 TRGV3P03979 118 aa21.54■■□□□ 1.04
CCM2-218ENST00000541586 FABP1P07148 127 aa21.54■■□□□ 1.04
CCM2-218ENST00000541586 RD3LP0DJH9 198 aa21.54■■□□□ 1.04
CCM2-218ENST00000541586 ORM2P19652 201 aa21.54■■□□□ 1.04
CCM2-218ENST00000541586 C10orf113Q5VZT2 155 aa21.54■■□□□ 1.04
CCM2-218ENST00000541586 C11orf44Q8N8P7 122 aa21.54■■□□□ 1.04
CCM2-218ENST00000541586 OR5AU1Q8NGC0 362 aa21.54■■□□□ 1.04
CCM2-218ENST00000541586 LINC00052Q96N35 136 aa21.54■■□□□ 1.04
CCM2-218ENST00000541586 FAM223BA6NKX1 122 aa21.53■■□□□ 1.04
CCM2-218ENST00000541586 C9JQL5 133 aa21.53■■□□□ 1.04
CCM2-218ENST00000541586 ARL14EPLP0DKL9 152 aa21.53■■□□□ 1.04
CCM2-218ENST00000541586 SLC35B1P78383 322 aa21.53■■□□□ 1.04
CCM2-218ENST00000541586 FAM223AQ8IWN6 122 aa21.53■■□□□ 1.04
CCM2-218ENST00000541586 OR1B1Q8NGR6 318 aa21.53■■□□□ 1.04
CCM2-218ENST00000541586 IGLV1-40P01703 118 aa21.52■■□□□ 1.04
CCM2-218ENST00000541586 PLP1P60201 277 aa21.52■■□□□ 1.04
CCM2-218ENST00000541586 YPEL3P61236 119 aaPredicted RBP21.52■■□□□ 1.04
CCM2-218ENST00000541586 ATP5G2Q06055 141 aa21.52■■□□□ 1.04
CCM2-218ENST00000541586 PEA15Q15121 130 aa21.52■■□□□ 1.04
CCM2-218ENST00000541586 HIST2H2BDQ6DRA6 164 aa21.52■■□□□ 1.04
CCM2-218ENST00000541586 IQCF2Q8IXL9 164 aa21.52■■□□□ 1.04
CCM2-218ENST00000541586 EEF1AKMT3Q96AZ1 226 aa21.52■■□□□ 1.04
CCM2-218ENST00000541586 RNF2Q99496 336 aa21.52■■□□□ 1.04
CCM2-218ENST00000541586 ELOA3CA0A087WX78 387 aaPredicted RBP21.52■■□□□ 1.03
CCM2-218ENST00000541586 CXorf1O96002 111 aa21.52■■□□□ 1.03
CCM2-218ENST00000541586 TOMM40O96008 361 aa21.52■■□□□ 1.03
CCM2-218ENST00000541586 CTSGP08311 255 aa21.52■■□□□ 1.03
CCM2-218ENST00000541586 PMS2P11Q13670 270 aa21.52■■□□□ 1.03
CCM2-218ENST00000541586 CCDC140Q96MF4 163 aa21.52■■□□□ 1.03
CCM2-218ENST00000541586 UHRF2Q96PU4 802 aa21.52■■□□□ 1.03
CCM2-218ENST00000541586 MRPL32Q9BYC8 188 aaKnown RBP21.52■■□□□ 1.03
CCM2-218ENST00000541586 TMEM218A2RU14 115 aa21.51■■□□□ 1.03
CCM2-218ENST00000541586 KRBOX1C9JBD0 128 aa21.51■■□□□ 1.03
CCM2-218ENST00000541586 TPPP2P59282 170 aa21.51■■□□□ 1.03
CCM2-218ENST00000541586 ZNF506Q5JVG8 444 aa21.51■■□□□ 1.03
CCM2-218ENST00000541586 MORN5Q5VZ52 161 aa21.51■■□□□ 1.03
CCM2-218ENST00000541586 OR51G1Q8NGK1 321 aa21.51■■□□□ 1.03
CCM2-218ENST00000541586 COL6A5A8TX70 2615 aa21.5■■□□□ 1.03
CCM2-218ENST00000541586 TRBV7-1A0A0A6YYK4 115 aa21.5■■□□□ 1.03
CCM2-218ENST00000541586 HYPMO75409 117 aa21.5■■□□□ 1.03
CCM2-218ENST00000541586 ZP3P21754 424 aa21.5■■□□□ 1.03
CCM2-218ENST00000541586 GPR183P32249 361 aa21.5■■□□□ 1.03
CCM2-218ENST00000541586 LYZP61626 148 aa21.5■■□□□ 1.03
CCM2-218ENST00000541586 C12orf54Q6X4T0 127 aa21.5■■□□□ 1.03
CCM2-218ENST00000541586 CHRDL1Q9BU40 450 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms