RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 SCN4AP35499 1836 aa8.27□□□□□ -1.09
COL4A6-208ENST00000538570 MORN2Q502X0 79 aa8.27□□□□□ -1.09
COL4A6-208ENST00000538570 LINC00114Q6XXX2 140 aa8.27□□□□□ -1.09
COL4A6-208ENST00000538570 TMEM256Q8N2U0 113 aa8.27□□□□□ -1.09
COL4A6-208ENST00000538570 IGKV1D-13A0A0B4J2D9 117 aa8.27□□□□□ -1.09
COL4A6-208ENST00000538570 ADARB2-AS1A8MUL3 147 aa8.27□□□□□ -1.09
COL4A6-208ENST00000538570 CD55P08174 381 aa8.27□□□□□ -1.09
COL4A6-208ENST00000538570 IGKV1-13P0DP09 117 aa8.27□□□□□ -1.09
COL4A6-208ENST00000538570 ZXDCQ2QGD7 858 aaPredicted RBP8.27□□□□□ -1.09
COL4A6-208ENST00000538570 ATP5L2Q7Z4Y8 100 aa8.27□□□□□ -1.09
COL4A6-208ENST00000538570 MRPS18CQ9Y3D5 142 aaKnown RBP8.27□□□□□ -1.09
COL4A6-208ENST00000538570 SCN8AQ9UQD0 1980 aa8.27□□□□□ -1.09
COL4A6-208ENST00000538570 CELA3BP08861 270 aa8.27□□□□□ -1.09
COL4A6-208ENST00000538570 MORN3Q6PF18 240 aaPredicted RBP8.27□□□□□ -1.09
COL4A6-208ENST00000538570 OCC1Q8TAD7 63 aa8.27□□□□□ -1.09
COL4A6-208ENST00000538570 TSKUQ8WUA8 353 aa8.27□□□□□ -1.09
COL4A6-208ENST00000538570 IFI27L1Q96BM0 104 aa8.27□□□□□ -1.09
COL4A6-208ENST00000538570 C1QTNF4Q9BXJ3 329 aa8.27□□□□□ -1.09
COL4A6-208ENST00000538570 ARFGEF1Q9Y6D6 1849 aa8.27□□□□□ -1.09
COL4A6-208ENST00000538570 LINC01549A6NIU2 74 aa8.27□□□□□ -1.09
COL4A6-208ENST00000538570 RBM3P98179 157 aaKnown RBP8.27□□□□□ -1.09
COL4A6-208ENST00000538570 FAM89BQ8N5H3 189 aa8.26□□□□□ -1.09
COL4A6-208ENST00000538570 TMEM133Q9H2Q1 129 aa8.26□□□□□ -1.09
COL4A6-208ENST00000538570 FAM90A9PA6NNJ1 464 aa8.26□□□□□ -1.09
COL4A6-208ENST00000538570 H0YIZ8 118 aa8.26□□□□□ -1.09
COL4A6-208ENST00000538570 GUSBP1Q15486 140 aa8.26□□□□□ -1.09
COL4A6-208ENST00000538570 EFNB3Q15768 340 aa8.26□□□□□ -1.09
COL4A6-208ENST00000538570 BRK1Q8WUW1 75 aa8.26□□□□□ -1.09
COL4A6-208ENST00000538570 CKAP5Q14008 2032 aa8.26□□□□□ -1.09
COL4A6-208ENST00000538570 TUBGCP6Q96RT7 1819 aa8.26□□□□□ -1.09
COL4A6-208ENST00000538570 K7EP34 96 aa8.26□□□□□ -1.09
COL4A6-208ENST00000538570 PPIFP30405 207 aaKnown RBP8.26□□□□□ -1.09
COL4A6-208ENST00000538570 DTX2Q86UW9 622 aa8.26□□□□□ -1.09
COL4A6-208ENST00000538570 WFDC1Q9HC57 220 aa8.26□□□□□ -1.09
COL4A6-208ENST00000538570 RHOGP84095 191 aa8.26□□□□□ -1.09
COL4A6-208ENST00000538570 PRCDQ00LT1 54 aa8.26□□□□□ -1.09
COL4A6-208ENST00000538570 VGLL1Q99990 258 aa8.26□□□□□ -1.09
COL4A6-208ENST00000538570 GGTLC1Q9BX51 225 aa8.26□□□□□ -1.09
COL4A6-208ENST00000538570 PRSS22Q9GZN4 317 aa8.26□□□□□ -1.09
COL4A6-208ENST00000538570 SMPXQ9UHP9 88 aa8.26□□□□□ -1.09
COL4A6-208ENST00000538570 F8W1H4 67 aa8.26□□□□□ -1.09
COL4A6-208ENST00000538570 DEPPQ9NTK1 212 aa8.26□□□□□ -1.09
COL4A6-208ENST00000538570 DNAJC13O75165 2243 aa8.25□□□□□ -1.09
COL4A6-208ENST00000538570 OVOL1O14753 267 aa8.25□□□□□ -1.09
COL4A6-208ENST00000538570 LINC00158P58513 81 aa8.25□□□□□ -1.09
COL4A6-208ENST00000538570 LINC01559Q495D7 138 aa8.25□□□□□ -1.09
COL4A6-208ENST00000538570 LCN12Q6JVE5 192 aa8.25□□□□□ -1.09
COL4A6-208ENST00000538570 C8orf46Q8TAG6 207 aa8.25□□□□□ -1.09
COL4A6-208ENST00000538570 WBP1Q96G27 269 aa8.25□□□□□ -1.09
COL4A6-208ENST00000538570 LAGE3Q14657 143 aa8.25□□□□□ -1.09
COL4A6-208ENST00000538570 ZNF837Q96EG3 531 aaPredicted RBP8.25□□□□□ -1.09
COL4A6-208ENST00000538570 RGPD3A6NKT7 1758 aaPredicted RBP8.25□□□□□ -1.09
COL4A6-208ENST00000538570 C9orf118A6NHY6 69 aa8.25□□□□□ -1.09
COL4A6-208ENST00000538570 FOXL1Q12952 345 aa8.25□□□□□ -1.09
COL4A6-208ENST00000538570 IGHV3-64A0A075B6Q5 118 aa8.25□□□□□ -1.09
COL4A6-208ENST00000538570 NCR2O95944 276 aa8.25□□□□□ -1.09
COL4A6-208ENST00000538570 C3orf79P0CE67 100 aa8.25□□□□□ -1.09
COL4A6-208ENST00000538570 PRB4P10163 310 aaPredicted RBP8.25□□□□□ -1.09
COL4A6-208ENST00000538570 PPDPFLQ8WWR9 84 aa8.25□□□□□ -1.09
COL4A6-208ENST00000538570 NAPSAO96009 420 aa8.25□□□□□ -1.09
COL4A6-208ENST00000538570 OR9G9P0C7N8 305 aa8.25□□□□□ -1.09
COL4A6-208ENST00000538570 MPZP25189 248 aa8.25□□□□□ -1.09
COL4A6-208ENST00000538570 FBLN5Q9UBX5 448 aa8.25□□□□□ -1.09
COL4A6-208ENST00000538570 GTSCR1Q86UQ5 136 aa8.24□□□□□ -1.09
COL4A6-208ENST00000538570 DMRTC2Q8IXT2 367 aaPredicted RBP8.24□□□□□ -1.09
COL4A6-208ENST00000538570 PRR32B1ATL7 298 aa8.24□□□□□ -1.09
COL4A6-208ENST00000538570 C9JAW5 83 aa8.24□□□□□ -1.09
COL4A6-208ENST00000538570 TGFBR3LH3BV60 316 aa8.24□□□□□ -1.09
COL4A6-208ENST00000538570 SRSF2Q01130 221 aaKnown RBP8.24□□□□□ -1.09
COL4A6-208ENST00000538570 C9orf106Q8NAJ2 232 aa8.24□□□□□ -1.09
COL4A6-208ENST00000538570 LYZL4Q96KX0 146 aa8.24□□□□□ -1.09
COL4A6-208ENST00000538570 H3BMM0 161 aa8.24□□□□□ -1.09
COL4A6-208ENST00000538570 SIGLEC15Q6ZMC9 328 aa8.24□□□□□ -1.09
COL4A6-208ENST00000538570 UBE2WQ96B02 151 aa8.24□□□□□ -1.09
COL4A6-208ENST00000538570 CHCHD5Q9BSY4 110 aa8.24□□□□□ -1.09
COL4A6-208ENST00000538570 TAF1LQ8IZX4 1826 aa8.24□□□□□ -1.09
COL4A6-208ENST00000538570 AHCTF1Q8WYP5 2266 aa8.24□□□□□ -1.09
COL4A6-208ENST00000538570 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.24□□□□□ -1.09
COL4A6-208ENST00000538570 NRXN2Q9P2S2 1712 aa8.24□□□□□ -1.09
COL4A6-208ENST00000538570 A0A0U1RRA0 63 aa8.24□□□□□ -1.09
COL4A6-208ENST00000538570 EPOPA6NHQ4 379 aa8.24□□□□□ -1.09
COL4A6-208ENST00000538570 TOMM40O96008 361 aa8.24□□□□□ -1.09
COL4A6-208ENST00000538570 CCL1P22362 96 aa8.24□□□□□ -1.09
COL4A6-208ENST00000538570 CHD5Q8TDI0 1954 aa8.24□□□□□ -1.09
COL4A6-208ENST00000538570 FAM186AA6NE01 2351 aa8.23□□□□□ -1.09
COL4A6-208ENST00000538570 A0A1B0GW64 132 aa8.23□□□□□ -1.09
COL4A6-208ENST00000538570 ID3Q02535 119 aa8.23□□□□□ -1.09
COL4A6-208ENST00000538570 PRB3Q04118 309 aaPredicted RBP8.23□□□□□ -1.09
COL4A6-208ENST00000538570 TMEM190Q8WZ59 177 aa8.23□□□□□ -1.09
COL4A6-208ENST00000538570 ANKRD36A6QL64 1941 aa8.23□□□□□ -1.09
COL4A6-208ENST00000538570 CDKN1AP38936 164 aa8.23□□□□□ -1.09
COL4A6-208ENST00000538570 PAX8Q06710 450 aa8.23□□□□□ -1.09
COL4A6-208ENST00000538570 LSM4Q9Y4Z0 139 aaKnown RBP8.23□□□□□ -1.09
COL4A6-208ENST00000538570 TRIOBPQ9H2D6 2365 aa8.23□□□□□ -1.09
COL4A6-208ENST00000538570 GATD1Q8NB37 220 aa8.23□□□□□ -1.09
COL4A6-208ENST00000538570 RNASE6Q93091 150 aaKnown RBP8.23□□□□□ -1.09
COL4A6-208ENST00000538570 DPH3P1Q9H4G8 78 aa8.23□□□□□ -1.09
COL4A6-208ENST00000538570 ZNF883P0CG24 379 aa8.23□□□□□ -1.09
COL4A6-208ENST00000538570 DUTP33316 252 aaKnown RBP8.23□□□□□ -1.09
COL4A6-208ENST00000538570 RNASE8Q8TDE3 154 aaKnown RBP8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 224 ms