RNA–Protein interactions for RNA: ENST00000534885.5

TNFRSF1A-205, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best)

Gene TNFRSF1A, Length 2,069 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-205ENST00000534885 CFHR3Q02985 330 aa15.83■□□□□ 0.12
TNFRSF1A-205ENST00000534885 GUK1Q16774 197 aa15.83■□□□□ 0.12
TNFRSF1A-205ENST00000534885 PATE2Q6UY27 113 aa15.83■□□□□ 0.12
TNFRSF1A-205ENST00000534885 MIR17HGQ75NE6 70 aa15.83■□□□□ 0.12
TNFRSF1A-205ENST00000534885 ZNF502Q8TBZ5 544 aa15.83■□□□□ 0.12
TNFRSF1A-205ENST00000534885 PRSS22Q9GZN4 317 aa15.83■□□□□ 0.12
TNFRSF1A-205ENST00000534885 EIF5A2Q9GZV4 153 aaKnown RBP15.83■□□□□ 0.12
TNFRSF1A-205ENST00000534885 HIVEP1P15822 2718 aa15.83■□□□□ 0.12
TNFRSF1A-205ENST00000534885 DNAJC9-AS1A6NH13 148 aa15.82■□□□□ 0.12
TNFRSF1A-205ENST00000534885 TRGV3P03979 118 aa15.82■□□□□ 0.12
TNFRSF1A-205ENST00000534885 OR5G3P0C626 314 aa15.82■□□□□ 0.12
TNFRSF1A-205ENST00000534885 HAGHQ16775 308 aa15.82■□□□□ 0.12
TNFRSF1A-205ENST00000534885 TMEM86BQ8N661 226 aa15.82■□□□□ 0.12
TNFRSF1A-205ENST00000534885 UHRF2Q96PU4 802 aa15.82■□□□□ 0.12
TNFRSF1A-205ENST00000534885 RARRES2Q99969 163 aa15.82■□□□□ 0.12
TNFRSF1A-205ENST00000534885 TREM1Q9NP99 234 aa15.82■□□□□ 0.12
TNFRSF1A-205ENST00000534885 ESM1Q9NQ30 184 aa15.82■□□□□ 0.12
TNFRSF1A-205ENST00000534885 GNG13Q9P2W3 67 aa15.82■□□□□ 0.12
TNFRSF1A-205ENST00000534885 COX7A2P2O60397 106 aa15.82■□□□□ 0.12
TNFRSF1A-205ENST00000534885 CD5P06127 495 aa15.82■□□□□ 0.12
TNFRSF1A-205ENST00000534885 ORM2P19652 201 aa15.82■□□□□ 0.12
TNFRSF1A-205ENST00000534885 MORN5Q5VZ52 161 aa15.82■□□□□ 0.12
TNFRSF1A-205ENST00000534885 CCDC140Q96MF4 163 aa15.82■□□□□ 0.12
TNFRSF1A-205ENST00000534885 KLK15Q9H2R5 256 aa15.82■□□□□ 0.12
TNFRSF1A-205ENST00000534885 DNAJC4Q9NNZ3 241 aa15.82■□□□□ 0.12
TNFRSF1A-205ENST00000534885 ZNF580Q9UK33 172 aa15.82■□□□□ 0.12
TNFRSF1A-205ENST00000534885 C9JQL5 133 aa15.81■□□□□ 0.12
TNFRSF1A-205ENST00000534885 STAG3L2P0CL84 134 aa15.81■□□□□ 0.12
TNFRSF1A-205ENST00000534885 STAG3L3P0CL85 134 aa15.81■□□□□ 0.12
TNFRSF1A-205ENST00000534885 RD3LP0DJH9 198 aa15.81■□□□□ 0.12
TNFRSF1A-205ENST00000534885 ARL14EPLP0DKL9 152 aa15.81■□□□□ 0.12
TNFRSF1A-205ENST00000534885 FCGR2BP31994 310 aaPredicted RBP15.81■□□□□ 0.12
TNFRSF1A-205ENST00000534885 Q71RC1 249 aaPredicted RBP15.81■□□□□ 0.12
TNFRSF1A-205ENST00000534885 ZNF329Q86UD4 541 aa15.81■□□□□ 0.12
TNFRSF1A-205ENST00000534885 OR1B1Q8NGR6 318 aa15.81■□□□□ 0.12
TNFRSF1A-205ENST00000534885 GATAD1Q8WUU5 269 aa15.81■□□□□ 0.12
TNFRSF1A-205ENST00000534885 FUT9Q9Y231 359 aa15.81■□□□□ 0.12
TNFRSF1A-205ENST00000534885 RBFOX3A6NFN3 312 aa15.8■□□□□ 0.12
TNFRSF1A-205ENST00000534885 CTSGP08311 255 aa15.8■□□□□ 0.12
TNFRSF1A-205ENST00000534885 GPR183P32249 361 aa15.8■□□□□ 0.12
TNFRSF1A-205ENST00000534885 TPPP2P59282 170 aa15.8■□□□□ 0.12
TNFRSF1A-205ENST00000534885 LCNL1Q6ZST4 164 aa15.8■□□□□ 0.12
TNFRSF1A-205ENST00000534885 TXN2Q99757 166 aa15.8■□□□□ 0.12
TNFRSF1A-205ENST00000534885 CHRDL1Q9BU40 450 aa15.8■□□□□ 0.12
TNFRSF1A-205ENST00000534885 C19orf24Q9BVV8 132 aa15.8■□□□□ 0.12
TNFRSF1A-205ENST00000534885 TRAV30A0A087WSZ9 112 aa15.8■□□□□ 0.12
TNFRSF1A-205ENST00000534885 FAM223BA6NKX1 122 aa15.8■□□□□ 0.12
TNFRSF1A-205ENST00000534885 IGLV1-40P01703 118 aa15.8■□□□□ 0.12
TNFRSF1A-205ENST00000534885 FLI1Q01543 452 aaPredicted RBP15.8■□□□□ 0.12
TNFRSF1A-205ENST00000534885 C10orf113Q5VZT2 155 aa15.8■□□□□ 0.12
TNFRSF1A-205ENST00000534885 FAM223AQ8IWN6 122 aa15.8■□□□□ 0.12
TNFRSF1A-205ENST00000534885 OR1L4Q8NGR5 311 aa15.8■□□□□ 0.12
TNFRSF1A-205ENST00000534885 PFDN5Q99471 154 aa15.8■□□□□ 0.12
TNFRSF1A-205ENST00000534885 PBDC1Q9BVG4 233 aa15.8■□□□□ 0.12
TNFRSF1A-205ENST00000534885 SEC11CQ9BY50 192 aa15.8■□□□□ 0.12
TNFRSF1A-205ENST00000534885 TOMM40O96008 361 aa15.79■□□□□ 0.12
TNFRSF1A-205ENST00000534885 PF4V1P10720 104 aa15.79■□□□□ 0.12
TNFRSF1A-205ENST00000534885 SRD5A1P18405 259 aa15.79■□□□□ 0.12
TNFRSF1A-205ENST00000534885 ADMP35318 185 aa15.79■□□□□ 0.12
TNFRSF1A-205ENST00000534885 LYZP61626 148 aa15.79■□□□□ 0.12
TNFRSF1A-205ENST00000534885 ATP5G2Q06055 141 aa15.79■□□□□ 0.12
TNFRSF1A-205ENST00000534885 C10orf99Q6UWK7 81 aa15.79■□□□□ 0.12
TNFRSF1A-205ENST00000534885 NF1P21359 2839 aa15.79■□□□□ 0.12
TNFRSF1A-205ENST00000534885 H3BUA1 57 aa15.79■□□□□ 0.12
TNFRSF1A-205ENST00000534885 CLEC3BP05452 202 aa15.79■□□□□ 0.12
TNFRSF1A-205ENST00000534885 CD99P14209 185 aa15.79■□□□□ 0.12
TNFRSF1A-205ENST00000534885 CLEC19AQ6UXS0 136 aa15.79■□□□□ 0.12
TNFRSF1A-205ENST00000534885 EEF1AKMT3Q96AZ1 226 aa15.79■□□□□ 0.12
TNFRSF1A-205ENST00000534885 FAM181BA6NEQ2 426 aa15.78■□□□□ 0.12
TNFRSF1A-205ENST00000534885 SNAPINO95295 136 aa15.78■□□□□ 0.12
TNFRSF1A-205ENST00000534885 BRI3O95415 125 aa15.78■□□□□ 0.12
TNFRSF1A-205ENST00000534885 PLP1P60201 277 aa15.78■□□□□ 0.12
TNFRSF1A-205ENST00000534885 YPEL3P61236 119 aaPredicted RBP15.78■□□□□ 0.12
TNFRSF1A-205ENST00000534885 TMEM88Q6PEY1 159 aa15.78■□□□□ 0.12
TNFRSF1A-205ENST00000534885 LINC00305Q7Z4B0 112 aa15.78■□□□□ 0.12
TNFRSF1A-205ENST00000534885 OR51G1Q8NGK1 321 aa15.78■□□□□ 0.12
TNFRSF1A-205ENST00000534885 ELOA3CA0A087WX78 387 aaPredicted RBP15.77■□□□□ 0.12
TNFRSF1A-205ENST00000534885 TRAV5A0A0B4J249 113 aa15.77■□□□□ 0.12
TNFRSF1A-205ENST00000534885 CXorf1O96002 111 aa15.77■□□□□ 0.12
TNFRSF1A-205ENST00000534885 FABP1P07148 127 aa15.77■□□□□ 0.12
TNFRSF1A-205ENST00000534885 MRPL32Q9BYC8 188 aaKnown RBP15.77■□□□□ 0.12
TNFRSF1A-205ENST00000534885 CDC42EP3Q9UKI2 254 aa15.77■□□□□ 0.12
TNFRSF1A-205ENST00000534885 TRBV7-1A0A0A6YYK4 115 aa15.77■□□□□ 0.11
TNFRSF1A-205ENST00000534885 HYPMO75409 117 aa15.77■□□□□ 0.11
TNFRSF1A-205ENST00000534885 BCL2P10415 239 aa15.77■□□□□ 0.11
TNFRSF1A-205ENST00000534885 ICAM4Q14773 271 aa15.77■□□□□ 0.11
TNFRSF1A-205ENST00000534885 ZNF491Q8N8L2 437 aa15.77■□□□□ 0.11
TNFRSF1A-205ENST00000534885 ZNF503Q96F45 646 aa15.77■□□□□ 0.11
TNFRSF1A-205ENST00000534885 IGHV3-35A0A0C4DH35 117 aa15.76■□□□□ 0.11
TNFRSF1A-205ENST00000534885 LOC102723971A0A1B0GUV8 181 aa15.76■□□□□ 0.11
TNFRSF1A-205ENST00000534885 IGHG4P01861 327 aa15.76■□□□□ 0.11
TNFRSF1A-205ENST00000534885 IL4P05112 153 aa15.76■□□□□ 0.11
TNFRSF1A-205ENST00000534885 PEA15Q15121 130 aa15.76■□□□□ 0.11
TNFRSF1A-205ENST00000534885 ZNF506Q5JVG8 444 aa15.76■□□□□ 0.11
TNFRSF1A-205ENST00000534885 Q8N2B8 174 aa15.76■□□□□ 0.11
TNFRSF1A-205ENST00000534885 RXFP4Q8TDU9 374 aa15.76■□□□□ 0.11
TNFRSF1A-205ENST00000534885 ZNF414Q96IQ9 312 aa15.76■□□□□ 0.11
TNFRSF1A-205ENST00000534885 FAM167A-AS1Q96KT0 104 aa15.76■□□□□ 0.11
TNFRSF1A-205ENST00000534885 RNF2Q99496 336 aa15.76■□□□□ 0.11
TNFRSF1A-205ENST00000534885 TECRQ9NZ01 308 aaKnown RBP15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms