RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 MGST2Q99735 147 aa12.19□□□□□ -0.46
USP47-207ENST00000527733 J3QLI3 93 aa12.19□□□□□ -0.46
USP47-207ENST00000527733 STAG3L2P0CL84 134 aa12.19□□□□□ -0.46
USP47-207ENST00000527733 STAG3L3P0CL85 134 aa12.19□□□□□ -0.46
USP47-207ENST00000527733 DGAT2L7PQ6IED9 249 aa12.19□□□□□ -0.46
USP47-207ENST00000527733 RPP25LQ8N5L8 163 aaKnown RBP12.19□□□□□ -0.46
USP47-207ENST00000527733 PGLYRP4Q96LB8 373 aa12.19□□□□□ -0.46
USP47-207ENST00000527733 PHLDA3Q9Y5J5 127 aa12.19□□□□□ -0.46
USP47-207ENST00000527733 LAMA3Q16787 3333 aa12.18□□□□□ -0.46
USP47-207ENST00000527733 NAV2Q8IVL1 2488 aa12.18□□□□□ -0.46
USP47-207ENST00000527733 NUP210LQ5VU65 1888 aa12.18□□□□□ -0.46
USP47-207ENST00000527733 IGHV3OR16-12A0A075B7B8 117 aa12.18□□□□□ -0.46
USP47-207ENST00000527733 SYT8Q8NBV8 401 aa12.18□□□□□ -0.46
USP47-207ENST00000527733 DOCK11Q5JSL3 2073 aa12.18□□□□□ -0.46
USP47-207ENST00000527733 GGCTO75223 188 aaKnown RBP12.18□□□□□ -0.46
USP47-207ENST00000527733 GCGP01275 180 aa12.18□□□□□ -0.46
USP47-207ENST00000527733 CCL20P78556 96 aa12.18□□□□□ -0.46
USP47-207ENST00000527733 MSMPQ1L6U9 139 aa12.18□□□□□ -0.46
USP47-207ENST00000527733 CCDC168Q8NDH2 2452 aa12.18□□□□□ -0.46
USP47-207ENST00000527733 EML6Q6ZMW3 1958 aa12.18□□□□□ -0.46
USP47-207ENST00000527733 FBLL1A6NHQ2 334 aaKnown RBP12.18□□□□□ -0.46
USP47-207ENST00000527733 FNDC10F2Z333 226 aa12.18□□□□□ -0.46
USP47-207ENST00000527733 ZNF343Q6P1L6 599 aa12.18□□□□□ -0.46
USP47-207ENST00000527733 C11orf44Q8N8P7 122 aa12.18□□□□□ -0.46
USP47-207ENST00000527733 FMC1Q96HJ9 113 aa12.18□□□□□ -0.46
USP47-207ENST00000527733 M0R2Z0 102 aa12.18□□□□□ -0.46
USP47-207ENST00000527733 PHOX2AO14813 284 aa12.18□□□□□ -0.46
USP47-207ENST00000527733 USMG5Q96IX5 58 aa12.18□□□□□ -0.46
USP47-207ENST00000527733 REG4Q9BYZ8 158 aa12.18□□□□□ -0.46
USP47-207ENST00000527733 GOLT1BQ9Y3E0 138 aa12.18□□□□□ -0.46
USP47-207ENST00000527733 CD81P60033 236 aa12.17□□□□□ -0.46
USP47-207ENST00000527733 IQCJQ1A5X6 159 aa12.17□□□□□ -0.46
USP47-207ENST00000527733 FAM159AQ6UWV7 190 aa12.17□□□□□ -0.46
USP47-207ENST00000527733 TOMM20LQ6UXN7 152 aa12.17□□□□□ -0.46
USP47-207ENST00000527733 BEX4Q9NWD9 120 aaPredicted RBP12.17□□□□□ -0.46
USP47-207ENST00000527733 OR5AL1P0C617 328 aa12.17□□□□□ -0.46
USP47-207ENST00000527733 NUTF2P61970 127 aaKnown RBP12.17□□□□□ -0.46
USP47-207ENST00000527733 CR1LQ2VPA4 569 aa12.17□□□□□ -0.46
USP47-207ENST00000527733 TEX38Q6PEX7 206 aa12.17□□□□□ -0.46
USP47-207ENST00000527733 KLHDC1Q8N7A1 406 aa12.17□□□□□ -0.46
USP47-207ENST00000527733 C8orf31Q8N9H6 132 aa12.17□□□□□ -0.46
USP47-207ENST00000527733 TRBV7-1A0A0A6YYK4 115 aa12.17□□□□□ -0.46
USP47-207ENST00000527733 TRAV1-1A0A0B4J248 108 aa12.17□□□□□ -0.46
USP47-207ENST00000527733 CD99P14209 185 aa12.17□□□□□ -0.46
USP47-207ENST00000527733 SRD5A1P18405 259 aa12.17□□□□□ -0.46
USP47-207ENST00000527733 SPOCK3Q9BQ16 436 aa12.17□□□□□ -0.46
USP47-207ENST00000527733 NDUFA4L2Q9NRX3 87 aa12.17□□□□□ -0.46
USP47-207ENST00000527733 C5orf42Q9H799 3197 aa12.17□□□□□ -0.46
USP47-207ENST00000527733 CNTFRP26992 372 aa12.16□□□□□ -0.46
USP47-207ENST00000527733 ATG101Q9BSB4 218 aa12.16□□□□□ -0.46
USP47-207ENST00000527733 C12orf57Q99622 126 aa12.16□□□□□ -0.46
USP47-207ENST00000527733 EPDR1Q9UM22 224 aa12.16□□□□□ -0.46
USP47-207ENST00000527733 TRGC2P03986 189 aa12.16□□□□□ -0.46
USP47-207ENST00000527733 AGMATQ9BSE5 352 aa12.16□□□□□ -0.46
USP47-207ENST00000527733 SDF2L1Q9HCN8 221 aa12.16□□□□□ -0.46
USP47-207ENST00000527733 ZNF329Q86UD4 541 aa12.16□□□□□ -0.46
USP47-207ENST00000527733 DTX2Q86UW9 622 aa12.16□□□□□ -0.46
USP47-207ENST00000527733 JKAMPQ9P055 326 aa12.16□□□□□ -0.46
USP47-207ENST00000527733 TRAV5A0A0B4J249 113 aa12.15□□□□□ -0.46
USP47-207ENST00000527733 MLANAQ16655 118 aa12.15□□□□□ -0.46
USP47-207ENST00000527733 SEPSECSQ9HD40 501 aaKnown RBP12.15□□□□□ -0.46
USP47-207ENST00000527733 CHD8Q9HCK8 2581 aa12.15□□□□□ -0.46
USP47-207ENST00000527733 PRSS1P07477 247 aa12.15□□□□□ -0.46
USP47-207ENST00000527733 TGIF2-C20orf24A0A0A6YYL0 155 aa12.15□□□□□ -0.46
USP47-207ENST00000527733 TMEM50AO95807 157 aa12.15□□□□□ -0.46
USP47-207ENST00000527733 IGHV4-39P01824 125 aa12.15□□□□□ -0.46
USP47-207ENST00000527733 CKS2P33552 79 aa12.15□□□□□ -0.46
USP47-207ENST00000527733 DIAPH2-AS1Q14236 149 aa12.15□□□□□ -0.46
USP47-207ENST00000527733 PARD6GQ9BYG4 376 aaPredicted RBP12.15□□□□□ -0.46
USP47-207ENST00000527733 GSX1Q9H4S2 264 aaPredicted RBP12.15□□□□□ -0.46
USP47-207ENST00000527733 RRN3P1Q2M238 152 aa12.14□□□□□ -0.47
USP47-207ENST00000527733 TMEM116Q8NCL8 245 aa12.14□□□□□ -0.47
USP47-207ENST00000527733 SLC25A39Q9BZJ4 359 aaPredicted RBP12.14□□□□□ -0.47
USP47-207ENST00000527733 CIARTQ8N365 385 aaPredicted RBP12.14□□□□□ -0.47
USP47-207ENST00000527733 POU2AF1Q16633 256 aa12.14□□□□□ -0.47
USP47-207ENST00000527733 VAMP8Q9BV40 100 aa12.14□□□□□ -0.47
USP47-207ENST00000527733 RFNGQ9Y644 331 aa12.14□□□□□ -0.47
USP47-207ENST00000527733 FAM223BA6NKX1 122 aa12.14□□□□□ -0.47
USP47-207ENST00000527733 FCER1GP30273 86 aa12.14□□□□□ -0.47
USP47-207ENST00000527733 GNG5P63218 68 aa12.14□□□□□ -0.47
USP47-207ENST00000527733 SPATA31B1PQ5VZV4 182 aa12.14□□□□□ -0.47
USP47-207ENST00000527733 FAM223AQ8IWN6 122 aa12.14□□□□□ -0.47
USP47-207ENST00000527733 C11orf42Q8N5U0 333 aa12.14□□□□□ -0.47
USP47-207ENST00000527733 IGHV4-61A0A0C4DH41 118 aa12.13□□□□□ -0.47
USP47-207ENST00000527733 ATP6V0E1O15342 81 aa12.13□□□□□ -0.47
USP47-207ENST00000527733 TRGC1P0CF51 173 aa12.13□□□□□ -0.47
USP47-207ENST00000527733 PAX9P55771 341 aa12.13□□□□□ -0.47
USP47-207ENST00000527733 PMS2P5A8MQ11 134 aa12.13□□□□□ -0.47
USP47-207ENST00000527733 SCRT1Q9BWW7 348 aa12.13□□□□□ -0.47
USP47-207ENST00000527733 MRPL18Q9H0U6 180 aaKnown RBP12.13□□□□□ -0.47
USP47-207ENST00000527733 ZNF98A6NK75 572 aa12.12□□□□□ -0.47
USP47-207ENST00000527733 RPL23P62829 140 aaKnown RBP12.12□□□□□ -0.47
USP47-207ENST00000527733 SRSF3P84103 164 aaKnown RBP12.12□□□□□ -0.47
USP47-207ENST00000527733 FAM110DQ8TAY7 271 aaPredicted RBP12.12□□□□□ -0.47
USP47-207ENST00000527733 DEFB113Q30KQ7 82 aa12.12□□□□□ -0.47
USP47-207ENST00000527733 LDLRAD2Q5SZI1 272 aa12.12□□□□□ -0.47
USP47-207ENST00000527733 SLC17A3O00476 420 aa12.12□□□□□ -0.47
USP47-207ENST00000527733 ELOBQ15370 118 aa12.12□□□□□ -0.47
USP47-207ENST00000527733 PIP4P2Q8N4L2 257 aa12.12□□□□□ -0.47
USP47-207ENST00000527733 IL36BQ9NZH7 164 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms