RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 NHLRC4P0CG21 123 aaPredicted RBP4.07□□□□□ -1.76
HMGB1P40-201ENST00000525121 IGHV4-30-4P0DP06 118 aa4.07□□□□□ -1.76
HMGB1P40-201ENST00000525121 PSG1P11464 419 aa4.07□□□□□ -1.76
HMGB1P40-201ENST00000525121 EDN2P20800 178 aa4.07□□□□□ -1.76
HMGB1P40-201ENST00000525121 CRYBB3P26998 211 aa4.07□□□□□ -1.76
HMGB1P40-201ENST00000525121 P2RY1P47900 373 aa4.07□□□□□ -1.76
HMGB1P40-201ENST00000525121 TFPI2P48307 235 aa4.07□□□□□ -1.76
HMGB1P40-201ENST00000525121 AP2S1P53680 142 aaPredicted RBP4.07□□□□□ -1.76
HMGB1P40-201ENST00000525121 RRAS2P62070 204 aaPredicted RBP4.07□□□□□ -1.76
HMGB1P40-201ENST00000525121 SELENOTP62341 195 aa4.07□□□□□ -1.76
HMGB1P40-201ENST00000525121 SLC38A11Q08AI6 406 aa4.07□□□□□ -1.76
HMGB1P40-201ENST00000525121 RAB32Q13637 225 aa4.07□□□□□ -1.76
HMGB1P40-201ENST00000525121 LRRC37A5PQ49AS3 106 aa4.07□□□□□ -1.76
HMGB1P40-201ENST00000525121 TMEM14EPQ6UXP3 125 aa4.07□□□□□ -1.76
HMGB1P40-201ENST00000525121 TMEM144Q7Z5S9 345 aa4.07□□□□□ -1.76
HMGB1P40-201ENST00000525121 ZNF546Q86UE3 836 aa4.07□□□□□ -1.76
HMGB1P40-201ENST00000525121 THAP8Q8NA92 274 aa4.07□□□□□ -1.76
HMGB1P40-201ENST00000525121 BPIFCQ8NFQ6 507 aa4.07□□□□□ -1.76
HMGB1P40-201ENST00000525121 ST8SIA2Q92186 375 aa4.07□□□□□ -1.76
HMGB1P40-201ENST00000525121 RNF125Q96EQ8 232 aa4.07□□□□□ -1.76
HMGB1P40-201ENST00000525121 RNF2Q99496 336 aa4.07□□□□□ -1.76
HMGB1P40-201ENST00000525121 TMEM147Q9BVK8 224 aa4.07□□□□□ -1.76
HMGB1P40-201ENST00000525121 GGACTQ9BVM4 153 aa4.07□□□□□ -1.76
HMGB1P40-201ENST00000525121 NMES1Q9C002 83 aa4.07□□□□□ -1.76
HMGB1P40-201ENST00000525121 SLC25A31Q9H0C2 315 aa4.07□□□□□ -1.76
HMGB1P40-201ENST00000525121 ZMAT4Q9H898 229 aa4.07□□□□□ -1.76
HMGB1P40-201ENST00000525121 FBXL17Q9UF56 701 aa4.07□□□□□ -1.76
HMGB1P40-201ENST00000525121 RNF24Q9Y225 148 aa4.07□□□□□ -1.76
HMGB1P40-201ENST00000525121 LSM4Q9Y4Z0 139 aaKnown RBP4.07□□□□□ -1.76
HMGB1P40-201ENST00000525121 SELENOKQ9Y6D0 94 aa4.07□□□□□ -1.76
HMGB1P40-201ENST00000525121 TRAV2A0A0B4J234 112 aa4.06□□□□□ -1.76
HMGB1P40-201ENST00000525121 IGHV3-66A0A0C4DH42 116 aa4.06□□□□□ -1.76
HMGB1P40-201ENST00000525121 ZNF785A8K8V0 405 aa4.06□□□□□ -1.76
HMGB1P40-201ENST00000525121 E5RGE8 158 aa4.06□□□□□ -1.76
HMGB1P40-201ENST00000525121 DEDDO75618 318 aa4.06□□□□□ -1.76
HMGB1P40-201ENST00000525121 SIX6O95475 246 aa4.06□□□□□ -1.76
HMGB1P40-201ENST00000525121 CD7P09564 240 aa4.06□□□□□ -1.76
HMGB1P40-201ENST00000525121 FRMD6-AS1P0C7T7 363 aa4.06□□□□□ -1.76
HMGB1P40-201ENST00000525121 S100A11P31949 105 aa4.06□□□□□ -1.76
HMGB1P40-201ENST00000525121 SULT1A1P50225 295 aa4.06□□□□□ -1.76
HMGB1P40-201ENST00000525121 RAP2BP61225 183 aa4.06□□□□□ -1.76
HMGB1P40-201ENST00000525121 ZNF90Q03938 601 aa4.06□□□□□ -1.76
HMGB1P40-201ENST00000525121 OR2F1Q13607 317 aa4.06□□□□□ -1.76
HMGB1P40-201ENST00000525121 USF2Q15853 346 aaPredicted RBP4.06□□□□□ -1.76
HMGB1P40-201ENST00000525121 SAMD13Q5VXD3 122 aa4.06□□□□□ -1.76
HMGB1P40-201ENST00000525121 TEPPQ6URK8 271 aa4.06□□□□□ -1.76
HMGB1P40-201ENST00000525121 CYP2G1PQ6ZSU1 146 aa4.06□□□□□ -1.76
HMGB1P40-201ENST00000525121 GBGT1Q8N5D6 347 aa4.06□□□□□ -1.76
HMGB1P40-201ENST00000525121 TMEM217Q8N7C4 229 aa4.06□□□□□ -1.76
HMGB1P40-201ENST00000525121 STXBP6Q8NFX7 210 aa4.06□□□□□ -1.76
HMGB1P40-201ENST00000525121 MED28Q9H204 178 aa4.06□□□□□ -1.76
HMGB1P40-201ENST00000525121 VSIRQ9H7M9 311 aa4.06□□□□□ -1.76
HMGB1P40-201ENST00000525121 SRD5A3Q9H8P0 318 aa4.06□□□□□ -1.76
HMGB1P40-201ENST00000525121 NPVFQ9HCQ7 196 aa4.06□□□□□ -1.76
HMGB1P40-201ENST00000525121 LYRM2Q9NU23 88 aaPredicted RBP4.06□□□□□ -1.76
HMGB1P40-201ENST00000525121 UQCC1Q9NVA1 299 aa4.06□□□□□ -1.76
HMGB1P40-201ENST00000525121 SLC45A2Q9UMX9 530 aa4.06□□□□□ -1.76
HMGB1P40-201ENST00000525121 ALG5Q9Y673 324 aa4.06□□□□□ -1.76
HMGB1P40-201ENST00000525121 VWFP04275 2813 aa4.06□□□□□ -1.76
HMGB1P40-201ENST00000525121 TRRAPQ9Y4A5 3859 aa4.06□□□□□ -1.76
HMGB1P40-201ENST00000525121 NOTCH3Q9UM47 2321 aa4.05□□□□□ -1.76
HMGB1P40-201ENST00000525121 NOTCH1P46531 2555 aa4.05□□□□□ -1.76
HMGB1P40-201ENST00000525121 LOC102724200A0A096LPH7 203 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P40-201ENST00000525121 UBE2L5PA0A1B0GUS4 154 aa4.05□□□□□ -1.76
HMGB1P40-201ENST00000525121 A8MZ25 164 aa4.05□□□□□ -1.76
HMGB1P40-201ENST00000525121 PRSS46E5RG02 174 aa4.05□□□□□ -1.76
HMGB1P40-201ENST00000525121 DFFBO76075 338 aa4.05□□□□□ -1.76
HMGB1P40-201ENST00000525121 CST7O76096 145 aa4.05□□□□□ -1.76
HMGB1P40-201ENST00000525121 LINC00869P0C866 280 aa4.05□□□□□ -1.76
HMGB1P40-201ENST00000525121 ORM2P19652 201 aa4.05□□□□□ -1.76
HMGB1P40-201ENST00000525121 GALR1P47211 349 aa4.05□□□□□ -1.76
HMGB1P40-201ENST00000525121 APOC4P55056 127 aa4.05□□□□□ -1.76
HMGB1P40-201ENST00000525121 PAX9P55771 341 aa4.05□□□□□ -1.76
HMGB1P40-201ENST00000525121 SNRPD3P62318 126 aaKnown RBP4.05□□□□□ -1.76
HMGB1P40-201ENST00000525121 BAXQ07812 192 aa4.05□□□□□ -1.76
HMGB1P40-201ENST00000525121 ATP6V1FQ16864 119 aa4.05□□□□□ -1.76
HMGB1P40-201ENST00000525121 C1orf194Q5T5A4 169 aa4.05□□□□□ -1.76
HMGB1P40-201ENST00000525121 PXDC1Q5TGL8 231 aa4.05□□□□□ -1.76
HMGB1P40-201ENST00000525121 SIGLEC15Q6ZMC9 328 aa4.05□□□□□ -1.76
HMGB1P40-201ENST00000525121 WFDC3Q8IUB2 231 aa4.05□□□□□ -1.76
HMGB1P40-201ENST00000525121 OR8I2Q8N0Y5 310 aa4.05□□□□□ -1.76
HMGB1P40-201ENST00000525121 Q8N1Y9 231 aa4.05□□□□□ -1.76
HMGB1P40-201ENST00000525121 DEFB125Q8N687 156 aa4.05□□□□□ -1.76
HMGB1P40-201ENST00000525121 STPG3Q8N7X2 389 aa4.05□□□□□ -1.76
HMGB1P40-201ENST00000525121 OR1B1Q8NGR6 318 aa4.05□□□□□ -1.76
HMGB1P40-201ENST00000525121 THAP6Q8TBB0 222 aa4.05□□□□□ -1.76
HMGB1P40-201ENST00000525121 PPP1R1CQ8WVI7 109 aa4.05□□□□□ -1.76
HMGB1P40-201ENST00000525121 ASB13Q8WXK3 278 aa4.05□□□□□ -1.76
HMGB1P40-201ENST00000525121 GPR82Q96P67 336 aa4.05□□□□□ -1.76
HMGB1P40-201ENST00000525121 ASCL2Q99929 193 aa4.05□□□□□ -1.76
HMGB1P40-201ENST00000525121 FAM110AQ9BQ89 295 aa4.05□□□□□ -1.76
HMGB1P40-201ENST00000525121 GGTLC1Q9BX51 225 aa4.05□□□□□ -1.76
HMGB1P40-201ENST00000525121 MS4A6AQ9H2W1 248 aa4.05□□□□□ -1.76
HMGB1P40-201ENST00000525121 KCNIP2Q9NS61 270 aa4.05□□□□□ -1.76
HMGB1P40-201ENST00000525121 UBQLN2Q9UHD9 624 aa4.05□□□□□ -1.76
HMGB1P40-201ENST00000525121 HIGD1AQ9Y241 93 aa4.05□□□□□ -1.76
HMGB1P40-201ENST00000525121 MEGF8Q7Z7M0 2845 aa4.05□□□□□ -1.76
HMGB1P40-201ENST00000525121 PKD1L1Q8TDX9 2849 aa4.05□□□□□ -1.76
HMGB1P40-201ENST00000525121 IGKV1D-37A0A075B6S9 117 aa4.04□□□□□ -1.76
HMGB1P40-201ENST00000525121 IGSF23A1L1A6 192 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms