RNA–Protein interactions for RNA: ENST00000523685.5

CTNNA1-239, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-239ENST00000523685 DCSTAMPQ9H295 470 aa3.81□□□□□ -1.8
CTNNA1-239ENST00000523685 CCDC59Q9P031 241 aaKnown RBP3.81□□□□□ -1.8
CTNNA1-239ENST00000523685 RABL2AQ9UBK7 228 aaPredicted RBP3.81□□□□□ -1.8
CTNNA1-239ENST00000523685 SMPXQ9UHP9 88 aa3.81□□□□□ -1.8
CTNNA1-239ENST00000523685 ANXA10Q9UJ72 324 aa3.81□□□□□ -1.8
CTNNA1-239ENST00000523685 NSG2Q9Y328 171 aa3.81□□□□□ -1.8
CTNNA1-239ENST00000523685 TRAV18A0A075B6X5 111 aa3.8□□□□□ -1.8
CTNNA1-239ENST00000523685 IGHV7-4-1A0A0J9YVY3 117 aa3.8□□□□□ -1.8
CTNNA1-239ENST00000523685 MEIS3P1A6NDR6 274 aa3.8□□□□□ -1.8
CTNNA1-239ENST00000523685 K7EMT4 169 aa3.8□□□□□ -1.8
CTNNA1-239ENST00000523685 M0R2N4 97 aa3.8□□□□□ -1.8
CTNNA1-239ENST00000523685 DNASE2O00115 360 aaPredicted RBP3.8□□□□□ -1.8
CTNNA1-239ENST00000523685 CHEK1O14757 476 aa3.8□□□□□ -1.8
CTNNA1-239ENST00000523685 NUPL2O15504 423 aaKnown RBP3.8□□□□□ -1.8
CTNNA1-239ENST00000523685 CCNKO75909 580 aa3.8□□□□□ -1.8
CTNNA1-239ENST00000523685 PPYP01298 95 aa3.8□□□□□ -1.8
CTNNA1-239ENST00000523685 IGHV3-48P01763 117 aa3.8□□□□□ -1.8
CTNNA1-239ENST00000523685 EIF4EP06730 217 aaKnown RBP3.8□□□□□ -1.8
CTNNA1-239ENST00000523685 SERPINE2P07093 398 aa3.8□□□□□ -1.8
CTNNA1-239ENST00000523685 HLA-DMBP28068 263 aa3.8□□□□□ -1.8
CTNNA1-239ENST00000523685 ETV6P41212 452 aa3.8□□□□□ -1.8
CTNNA1-239ENST00000523685 CMC4P56277 68 aaPredicted RBP3.8□□□□□ -1.8
CTNNA1-239ENST00000523685 DEFA1P59665 94 aa3.8□□□□□ -1.8
CTNNA1-239ENST00000523685 DEFA3P59666 94 aa3.8□□□□□ -1.8
CTNNA1-239ENST00000523685 DEFB131AP59861 70 aa3.8□□□□□ -1.8
CTNNA1-239ENST00000523685 ERVK-16P61578 105 aa3.8□□□□□ -1.8
CTNNA1-239ENST00000523685 PAFAH1B2P68402 229 aa3.8□□□□□ -1.8
CTNNA1-239ENST00000523685 KLK9Q2XQG4 91 aa3.8□□□□□ -1.8
CTNNA1-239ENST00000523685 ZNF818PQ6ZRF7 136 aa3.8□□□□□ -1.8
CTNNA1-239ENST00000523685 TCF24Q7RTU0 167 aa3.8□□□□□ -1.8
CTNNA1-239ENST00000523685 BEST4Q8NFU0 473 aa3.8□□□□□ -1.8
CTNNA1-239ENST00000523685 OR1L8Q8NGR8 309 aa3.8□□□□□ -1.8
CTNNA1-239ENST00000523685 OR6F1Q8NGZ6 308 aa3.8□□□□□ -1.8
CTNNA1-239ENST00000523685 LGALS14Q8TCE9 139 aa3.8□□□□□ -1.8
CTNNA1-239ENST00000523685 SLC25A46Q96AG3 418 aa3.8□□□□□ -1.8
CTNNA1-239ENST00000523685 YIPF6Q96EC8 236 aa3.8□□□□□ -1.8
CTNNA1-239ENST00000523685 CCDC32Q9BV29 185 aa3.8□□□□□ -1.8
CTNNA1-239ENST00000523685 SLIRPQ9GZT3 109 aaKnown RBP3.8□□□□□ -1.8
CTNNA1-239ENST00000523685 NXF2Q9GZY0 626 aaKnown RBP3.8□□□□□ -1.8
CTNNA1-239ENST00000523685 C11orf68Q9H3H3 251 aaKnown RBP3.8□□□□□ -1.8
CTNNA1-239ENST00000523685 DUSP21Q9H596 190 aa3.8□□□□□ -1.8
CTNNA1-239ENST00000523685 KLK9Q9UKQ9 250 aa3.8□□□□□ -1.8
CTNNA1-239ENST00000523685 APLNQ9ULZ1 77 aa3.8□□□□□ -1.8
CTNNA1-239ENST00000523685 OR51B2Q9Y5P1 312 aa3.8□□□□□ -1.8
CTNNA1-239ENST00000523685 F11RQ9Y624 299 aaKnown RBP3.8□□□□□ -1.8
CTNNA1-239ENST00000523685 RYR1P21817 5038 aa3.79□□□□□ -1.8
CTNNA1-239ENST00000523685 IGHV4-4A0A075B6R2 117 aa3.79□□□□□ -1.8
CTNNA1-239ENST00000523685 TRAV14DV4A0A0A6YYC5 116 aa3.79□□□□□ -1.8
CTNNA1-239ENST00000523685 TRDV1A0A1B0GX56 115 aa3.79□□□□□ -1.8
CTNNA1-239ENST00000523685 C11orf94C9JXX5 98 aa3.79□□□□□ -1.8
CTNNA1-239ENST00000523685 K7EIM0 57 aa3.79□□□□□ -1.8
CTNNA1-239ENST00000523685 ST8SIA3O43173 380 aa3.79□□□□□ -1.8
CTNNA1-239ENST00000523685 RBFOX2O43251 390 aaKnown RBP eCLIP3.79□□□□□ -1.8
CTNNA1-239ENST00000523685 SNAPC5O75971 98 aa3.79□□□□□ -1.8
CTNNA1-239ENST00000523685 KRASP01116 189 aa3.79□□□□□ -1.8
CTNNA1-239ENST00000523685 TSHBP01222 138 aa3.79□□□□□ -1.8
CTNNA1-239ENST00000523685 RLN1P04808 185 aa3.79□□□□□ -1.8
CTNNA1-239ENST00000523685 CTSGP08311 255 aa3.79□□□□□ -1.8
CTNNA1-239ENST00000523685 G6PCP35575 357 aa3.79□□□□□ -1.8
CTNNA1-239ENST00000523685 LPAR6P43657 344 aa3.79□□□□□ -1.8
CTNNA1-239ENST00000523685 NKX2-5P52952 324 aaPredicted RBP3.79□□□□□ -1.8
CTNNA1-239ENST00000523685 TCTAP57738 103 aa3.79□□□□□ -1.8
CTNNA1-239ENST00000523685 HERV-K104P61576 105 aa3.79□□□□□ -1.8
CTNNA1-239ENST00000523685 ZFP69Q49AA0 526 aa3.79□□□□□ -1.8
CTNNA1-239ENST00000523685 PHLDA2Q53GA4 152 aa3.79□□□□□ -1.8
CTNNA1-239ENST00000523685 Q6ZTC4 211 aa3.79□□□□□ -1.8
CTNNA1-239ENST00000523685 ZNF767PQ75MW2 155 aa3.79□□□□□ -1.8
CTNNA1-239ENST00000523685 STHQ8IWL8 128 aa3.79□□□□□ -1.8
CTNNA1-239ENST00000523685 STPG4Q8N801 248 aa3.79□□□□□ -1.8
CTNNA1-239ENST00000523685 LSM10Q969L4 123 aaKnown RBP3.79□□□□□ -1.8
CTNNA1-239ENST00000523685 PINX1Q96BK5 328 aaKnown RBP3.79□□□□□ -1.8
CTNNA1-239ENST00000523685 MOB3AQ96BX8 217 aa3.79□□□□□ -1.8
CTNNA1-239ENST00000523685 NDUFA4L2Q9NRX3 87 aa3.79□□□□□ -1.8
CTNNA1-239ENST00000523685 NDUFB11Q9NX14 153 aa3.79□□□□□ -1.8
CTNNA1-239ENST00000523685 CLEC5AQ9NY25 188 aa3.79□□□□□ -1.8
CTNNA1-239ENST00000523685 RABAC1Q9UI14 185 aa3.79□□□□□ -1.8
CTNNA1-239ENST00000523685 ETV7Q9Y603 341 aa3.79□□□□□ -1.8
CTNNA1-239ENST00000523685 TRAV10A0A0B4J240 114 aa3.78□□□□□ -1.8
CTNNA1-239ENST00000523685 C15orf61A6NNL5 157 aa3.78□□□□□ -1.8
CTNNA1-239ENST00000523685 KNCNA6PVL3 124 aa3.78□□□□□ -1.8
CTNNA1-239ENST00000523685 SMIM1B2RUZ4 78 aa3.78□□□□□ -1.8
CTNNA1-239ENST00000523685 GNG7O60262 68 aa3.78□□□□□ -1.8
CTNNA1-239ENST00000523685 CIDEAO60543 219 aa3.78□□□□□ -1.8
CTNNA1-239ENST00000523685 SCGNO76038 276 aa3.78□□□□□ -1.8
CTNNA1-239ENST00000523685 DFFBO76075 338 aa3.78□□□□□ -1.8
CTNNA1-239ENST00000523685 MT-CO2P00403 227 aa3.78□□□□□ -1.8
CTNNA1-239ENST00000523685 APOA1P02647 267 aa3.78□□□□□ -1.8
CTNNA1-239ENST00000523685 APOHP02749 345 aaPredicted RBP3.78□□□□□ -1.8
CTNNA1-239ENST00000523685 RBMY1A1P0DJD3 496 aaKnown RBP3.78□□□□□ -1.8
CTNNA1-239ENST00000523685 RBMY1CP0DJD4 496 aa3.78□□□□□ -1.8
CTNNA1-239ENST00000523685 IL7P13232 177 aa3.78□□□□□ -1.8
CTNNA1-239ENST00000523685 PSMB9P28065 219 aa3.78□□□□□ -1.8
CTNNA1-239ENST00000523685 LINC01547P58512 204 aaPredicted RBP3.78□□□□□ -1.8
CTNNA1-239ENST00000523685 B2MP61769 119 aa3.78□□□□□ -1.8
CTNNA1-239ENST00000523685 MXD1Q05195 221 aa3.78□□□□□ -1.8
CTNNA1-239ENST00000523685 RBMY1FQ15415 496 aaKnown RBP3.78□□□□□ -1.8
CTNNA1-239ENST00000523685 MSMO1Q15800 293 aa3.78□□□□□ -1.8
CTNNA1-239ENST00000523685 POU2AF1Q16633 256 aa3.78□□□□□ -1.8
CTNNA1-239ENST00000523685 SPINK9Q5DT21 86 aa3.78□□□□□ -1.8
CTNNA1-239ENST00000523685 IDNKQ5T6J7 187 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms