RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 ALDH3B2P48448 385 aa4.32□□□□□ -1.72
VPS13B-211ENST00000522802 HOXA1P49639 335 aaPredicted RBP4.32□□□□□ -1.72
VPS13B-211ENST00000522802 PPP5CP53041 499 aa4.32□□□□□ -1.72
VPS13B-211ENST00000522802 TAS2R31P59538 309 aa4.32□□□□□ -1.72
VPS13B-211ENST00000522802 RCN1Q15293 331 aa4.32□□□□□ -1.72
VPS13B-211ENST00000522802 USF2Q15853 346 aaPredicted RBP4.32□□□□□ -1.72
VPS13B-211ENST00000522802 HSD17B12Q53GQ0 312 aa4.32□□□□□ -1.72
VPS13B-211ENST00000522802 TMEM69Q5SWH9 247 aa4.32□□□□□ -1.72
VPS13B-211ENST00000522802 OGFRL1Q5TC84 451 aaPredicted RBP4.32□□□□□ -1.72
VPS13B-211ENST00000522802 C1orf146Q5VVC0 180 aa4.32□□□□□ -1.72
VPS13B-211ENST00000522802 THOC7Q6I9Y2 204 aaKnown RBP4.32□□□□□ -1.72
VPS13B-211ENST00000522802 CFAP161Q6P656 301 aa4.32□□□□□ -1.72
VPS13B-211ENST00000522802 HSD17B13Q7Z5P4 300 aaPredicted RBP4.32□□□□□ -1.72
VPS13B-211ENST00000522802 DMBX1Q8NFW5 382 aa4.32□□□□□ -1.72
VPS13B-211ENST00000522802 OR1L8Q8NGR8 309 aa4.32□□□□□ -1.72
VPS13B-211ENST00000522802 OR1P1Q8NH06 330 aa4.32□□□□□ -1.72
VPS13B-211ENST00000522802 PYDC1Q8WXC3 89 aa4.32□□□□□ -1.72
VPS13B-211ENST00000522802 FAM3DQ96BQ1 224 aa4.32□□□□□ -1.72
VPS13B-211ENST00000522802 TMEM80Q96HE8 168 aa4.32□□□□□ -1.72
VPS13B-211ENST00000522802 KRTAP2-2Q9BYT5 123 aa4.32□□□□□ -1.72
VPS13B-211ENST00000522802 SLC35B3Q9H1N7 401 aa4.32□□□□□ -1.72
VPS13B-211ENST00000522802 SDF2L1Q9HCN8 221 aa4.32□□□□□ -1.72
VPS13B-211ENST00000522802 CCL28Q9NRJ3 127 aa4.32□□□□□ -1.72
VPS13B-211ENST00000522802 AK6Q9Y3D8 172 aaKnown RBP4.32□□□□□ -1.72
VPS13B-211ENST00000522802 HLA-DRB4X5D2U9 266 aa4.32□□□□□ -1.72
VPS13B-211ENST00000522802 A0A087WYN8 130 aa4.31□□□□□ -1.72
VPS13B-211ENST00000522802 LOC100130705A0A1B0GUX0 176 aa4.31□□□□□ -1.72
VPS13B-211ENST00000522802 IRGMA1A4Y4 181 aa4.31□□□□□ -1.72
VPS13B-211ENST00000522802 RBFOX2O43251 390 aaKnown RBP eCLIP4.31□□□□□ -1.72
VPS13B-211ENST00000522802 SLC22A5O76082 557 aa4.31□□□□□ -1.72
VPS13B-211ENST00000522802 HBE1P02100 147 aa4.31□□□□□ -1.72
VPS13B-211ENST00000522802 PRM2P04554 102 aa4.31□□□□□ -1.72
VPS13B-211ENST00000522802 UCHL1P09936 223 aa4.31□□□□□ -1.72
VPS13B-211ENST00000522802 DEFB130BP0DP73 79 aa4.31□□□□□ -1.72
VPS13B-211ENST00000522802 DEFB130AP0DP74 79 aa4.31□□□□□ -1.72
VPS13B-211ENST00000522802 PTHLHP12272 177 aa4.31□□□□□ -1.72
VPS13B-211ENST00000522802 CRYBB3P26998 211 aa4.31□□□□□ -1.72
VPS13B-211ENST00000522802 GNRHRP30968 328 aa4.31□□□□□ -1.72
VPS13B-211ENST00000522802 WNT4P56705 351 aa4.31□□□□□ -1.72
VPS13B-211ENST00000522802 CLINT1Q14677 625 aa4.31□□□□□ -1.72
VPS13B-211ENST00000522802 SSX1Q16384 188 aa4.31□□□□□ -1.72
VPS13B-211ENST00000522802 ZNF600Q6ZNG1 722 aa4.31□□□□□ -1.72
VPS13B-211ENST00000522802 C1orf158Q8N1D5 194 aa4.31□□□□□ -1.72
VPS13B-211ENST00000522802 SLC24A4Q8NFF2 622 aa4.31□□□□□ -1.72
VPS13B-211ENST00000522802 OR13F1Q8NGS4 319 aa4.31□□□□□ -1.72
VPS13B-211ENST00000522802 OR10R2Q8NGX6 335 aa4.31□□□□□ -1.72
VPS13B-211ENST00000522802 OR51H1Q8NH63 302 aa4.31□□□□□ -1.72
VPS13B-211ENST00000522802 PINX1Q96BK5 328 aaKnown RBP4.31□□□□□ -1.72
VPS13B-211ENST00000522802 TXN2Q99757 166 aa4.31□□□□□ -1.72
VPS13B-211ENST00000522802 TMEM231Q9H6L2 316 aa4.31□□□□□ -1.72
VPS13B-211ENST00000522802 MRPL36Q9P0J6 103 aaKnown RBP4.31□□□□□ -1.72
VPS13B-211ENST00000522802 OR51B2Q9Y5P1 312 aa4.31□□□□□ -1.72
VPS13B-211ENST00000522802 IGLV5-45A0A087WSX0 123 aa4.3□□□□□ -1.72
VPS13B-211ENST00000522802 A0A1W2PPQ1 181 aa4.3□□□□□ -1.72
VPS13B-211ENST00000522802 EFCAB10A6NFE3 127 aa4.3□□□□□ -1.72
VPS13B-211ENST00000522802 PRSS47A8MTI9 375 aa4.3□□□□□ -1.72
VPS13B-211ENST00000522802 CTDSP2O14595 271 aa4.3□□□□□ -1.72
VPS13B-211ENST00000522802 MYL12BO14950 172 aa4.3□□□□□ -1.72
VPS13B-211ENST00000522802 HPRT1P00492 218 aa4.3□□□□□ -1.72
VPS13B-211ENST00000522802 IFNA5P01569 189 aa4.3□□□□□ -1.72
VPS13B-211ENST00000522802 NPPCP23582 126 aa4.3□□□□□ -1.72
VPS13B-211ENST00000522802 DTYMKP23919 212 aa4.3□□□□□ -1.72
VPS13B-211ENST00000522802 TALDO1P37837 337 aa4.3□□□□□ -1.72
VPS13B-211ENST00000522802 ST3GAL4Q11206 333 aa4.3□□□□□ -1.72
VPS13B-211ENST00000522802 C2orf76Q3KRA6 126 aa4.3□□□□□ -1.72
VPS13B-211ENST00000522802 HES5Q5TA89 166 aa4.3□□□□□ -1.72
VPS13B-211ENST00000522802 CCDC197Q8NCU1 140 aa4.3□□□□□ -1.72
VPS13B-211ENST00000522802 MOB3AQ96BX8 217 aa4.3□□□□□ -1.72
VPS13B-211ENST00000522802 METTL26Q96S19 204 aa4.3□□□□□ -1.72
VPS13B-211ENST00000522802 UPK3BQ9BT76 320 aa4.3□□□□□ -1.72
VPS13B-211ENST00000522802 COMMD9Q9P000 198 aa4.3□□□□□ -1.72
VPS13B-211ENST00000522802 A0A087WTM6 91 aa4.29□□□□□ -1.72
VPS13B-211ENST00000522802 PLAC8L1A1L4L8 177 aa4.29□□□□□ -1.72
VPS13B-211ENST00000522802 GADD45AP24522 165 aa4.29□□□□□ -1.72
VPS13B-211ENST00000522802 G6PCP35575 357 aa4.29□□□□□ -1.72
VPS13B-211ENST00000522802 SNRPD3P62318 126 aaKnown RBP4.29□□□□□ -1.72
VPS13B-211ENST00000522802 FCN2Q15485 313 aa4.29□□□□□ -1.72
VPS13B-211ENST00000522802 RRN3P1Q2M238 152 aa4.29□□□□□ -1.72
VPS13B-211ENST00000522802 KCTD21Q4G0X4 260 aa4.29□□□□□ -1.72
VPS13B-211ENST00000522802 AADACL3Q5VUY0 350 aa4.29□□□□□ -1.72
VPS13B-211ENST00000522802 ZNF818PQ6ZRF7 136 aa4.29□□□□□ -1.72
VPS13B-211ENST00000522802 AHSA2Q719I0 299 aa4.29□□□□□ -1.72
VPS13B-211ENST00000522802 TMEM203Q969S6 136 aa4.29□□□□□ -1.72
VPS13B-211ENST00000522802 C7orf50Q9BRJ6 194 aaKnown RBP4.29□□□□□ -1.72
VPS13B-211ENST00000522802 FNDC4Q9H6D8 234 aaPredicted RBP4.29□□□□□ -1.72
VPS13B-211ENST00000522802 GOLT1BQ9Y3E0 138 aa4.29□□□□□ -1.72
VPS13B-211ENST00000522802 A0A0B4J293 547 aa4.28□□□□□ -1.72
VPS13B-211ENST00000522802 TEX13DA0A0J9YY54 714 aaPredicted RBP4.28□□□□□ -1.72
VPS13B-211ENST00000522802 ZNF705GA8MUZ8 300 aaPredicted RBP4.28□□□□□ -1.72
VPS13B-211ENST00000522802 F6UB75 175 aa4.28□□□□□ -1.72
VPS13B-211ENST00000522802 SSX5O60225 188 aa4.28□□□□□ -1.72
VPS13B-211ENST00000522802 KRASP01116 189 aa4.28□□□□□ -1.72
VPS13B-211ENST00000522802 PPYP01298 95 aa4.28□□□□□ -1.72
VPS13B-211ENST00000522802 RLN1P04808 185 aa4.28□□□□□ -1.72
VPS13B-211ENST00000522802 ATP5G1P05496 136 aa4.28□□□□□ -1.72
VPS13B-211ENST00000522802 CTXN2P0C2S0 81 aa4.28□□□□□ -1.72
VPS13B-211ENST00000522802 FCGR2CP31995 323 aa4.28□□□□□ -1.72
VPS13B-211ENST00000522802 NKX2-1P43699 371 aaPredicted RBP4.28□□□□□ -1.72
VPS13B-211ENST00000522802 ATP5G3P48201 142 aa4.28□□□□□ -1.72
VPS13B-211ENST00000522802 OR10A3P58181 314 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms