RNA–Protein interactions for RNA: ENST00000522665.5

NDRG1-223, Transcript of N-myc downstream regulated 1, human

TSL 2

Gene NDRG1, Length 411 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NDRG1-223	ENST00000522665	ZFHX3	Q15911	3703 aa		11.68	□□□□□ -0.54
NDRG1-223	ENST00000522665	ELOA3C	A0A087WX78	387 aa	Predicted RBP	11.68	□□□□□ -0.54
NDRG1-223	ENST00000522665	COX7A2P2	O60397	106 aa		11.68	□□□□□ -0.54
NDRG1-223	ENST00000522665	LGALS1	P09382	135 aa	Known RBP	11.68	□□□□□ -0.54
NDRG1-223	ENST00000522665	PSG1	P11464	419 aa		11.68	□□□□□ -0.54
NDRG1-223	ENST00000522665	GATA2	P23769	480 aa	Predicted RBP	11.68	□□□□□ -0.54
NDRG1-223	ENST00000522665	CLLU1	Q5K131	121 aa		11.68	□□□□□ -0.54
NDRG1-223	ENST00000522665	S100A7A	Q86SG5	101 aa		11.68	□□□□□ -0.54
NDRG1-223	ENST00000522665	WIPF2	Q8TF74	440 aa	Predicted RBP	11.68	□□□□□ -0.54
NDRG1-223	ENST00000522665	WFDC12	Q8WWY7	111 aa		11.68	□□□□□ -0.54
NDRG1-223	ENST00000522665	RNF2	Q99496	336 aa		11.68	□□□□□ -0.54
NDRG1-223	ENST00000522665	CHRDL1	Q9BU40	450 aa		11.68	□□□□□ -0.54
NDRG1-223	ENST00000522665	ACTR3C	Q9C0K3	210 aa	Predicted RBP	11.68	□□□□□ -0.54
NDRG1-223	ENST00000522665	RPRM	Q9NS64	109 aa		11.68	□□□□□ -0.54
NDRG1-223	ENST00000522665	OR2C1	O95371	312 aa		11.67	□□□□□ -0.54
NDRG1-223	ENST00000522665	ADM	P35318	185 aa		11.67	□□□□□ -0.54
NDRG1-223	ENST00000522665	PLP1	P60201	277 aa		11.67	□□□□□ -0.54
NDRG1-223	ENST00000522665	LYZ	P61626	148 aa		11.67	□□□□□ -0.54
NDRG1-223	ENST00000522665	RHOB	P62745	196 aa		11.67	□□□□□ -0.54
NDRG1-223	ENST00000522665	KIAA0141	Q14154	515 aa	Predicted RBP	11.67	□□□□□ -0.54
NDRG1-223	ENST00000522665	GATAD1	Q8WUU5	269 aa		11.67	□□□□□ -0.54
NDRG1-223	ENST00000522665	VSIR	Q9H7M9	311 aa		11.67	□□□□□ -0.54
NDRG1-223	ENST00000522665	PLA2G2E	Q9NZK7	142 aa		11.67	□□□□□ -0.54
NDRG1-223	ENST00000522665	PEF1	Q9UBV8	284 aa	Known RBP	11.67	□□□□□ -0.54
NDRG1-223	ENST00000522665		A0A1W2PPV4	95 aa		11.66	□□□□□ -0.54
NDRG1-223	ENST00000522665	ANKRD34B	A5PLL1	514 aa		11.66	□□□□□ -0.54
NDRG1-223	ENST00000522665	SEC14L6	B5MCN3	397 aa		11.66	□□□□□ -0.54
NDRG1-223	ENST00000522665	TEX46	H3BTG2	121 aa		11.66	□□□□□ -0.54
NDRG1-223	ENST00000522665	GGCT	O75223	188 aa	Known RBP	11.66	□□□□□ -0.54
NDRG1-223	ENST00000522665	HYPM	O75409	117 aa		11.66	□□□□□ -0.54
NDRG1-223	ENST00000522665	IL4	P05112	153 aa		11.66	□□□□□ -0.54
NDRG1-223	ENST00000522665	NMB	P08949	121 aa		11.66	□□□□□ -0.54
NDRG1-223	ENST00000522665	S100A7	P31151	101 aa		11.66	□□□□□ -0.54
NDRG1-223	ENST00000522665	CDX1	P47902	265 aa	Predicted RBP	11.66	□□□□□ -0.54
NDRG1-223	ENST00000522665	CDC34	P49427	236 aa	Predicted RBP	11.66	□□□□□ -0.54
NDRG1-223	ENST00000522665	PROK1	P58294	105 aa		11.66	□□□□□ -0.54
NDRG1-223	ENST00000522665	KHDC1L	Q5JSQ8	128 aa		11.66	□□□□□ -0.54
NDRG1-223	ENST00000522665	C10orf113	Q5VZT2	155 aa		11.66	□□□□□ -0.54
NDRG1-223	ENST00000522665	FAM122C	Q6P4D5	195 aa		11.66	□□□□□ -0.54
NDRG1-223	ENST00000522665	OR1B1	Q8NGR6	318 aa		11.66	□□□□□ -0.54
NDRG1-223	ENST00000522665	C4orf3	Q8WVX3	66 aa		11.66	□□□□□ -0.54
NDRG1-223	ENST00000522665	RNF125	Q96EQ8	232 aa		11.66	□□□□□ -0.54
NDRG1-223	ENST00000522665	RCC1L	Q96I51	464 aa	Known RBP	11.66	□□□□□ -0.54
NDRG1-223	ENST00000522665	MRPL32	Q9BYC8	188 aa	Known RBP	11.66	□□□□□ -0.54
NDRG1-223	ENST00000522665	DNAJC4	Q9NNZ3	241 aa		11.66	□□□□□ -0.54
NDRG1-223	ENST00000522665	CTXND1	A0A1B0GTU2	59 aa		11.65	□□□□□ -0.54
NDRG1-223	ENST00000522665	WI2-2373I1.2	A0A1W2PRP0	233 aa		11.65	□□□□□ -0.54
NDRG1-223	ENST00000522665	PPP5D1	E7EU14	171 aa		11.65	□□□□□ -0.54
NDRG1-223	ENST00000522665	BMPR1B	O00238	502 aa		11.65	□□□□□ -0.54
NDRG1-223	ENST00000522665	H2AFB1	P0C5Y9	115 aa		11.65	□□□□□ -0.54
NDRG1-223	ENST00000522665	OR5G3	P0C626	314 aa		11.65	□□□□□ -0.54
NDRG1-223	ENST00000522665	ORM2	P19652	201 aa		11.65	□□□□□ -0.54
NDRG1-223	ENST00000522665	FHIT	P49789	147 aa		11.65	□□□□□ -0.54
NDRG1-223	ENST00000522665	SRSF2	Q01130	221 aa	Known RBP	11.65	□□□□□ -0.54
NDRG1-223	ENST00000522665	FOXL1	Q12952	345 aa		11.65	□□□□□ -0.54
NDRG1-223	ENST00000522665	GCSAML	Q5JQS6	135 aa		11.65	□□□□□ -0.54
NDRG1-223	ENST00000522665	RPP25L	Q8N5L8	163 aa	Known RBP	11.65	□□□□□ -0.54
NDRG1-223	ENST00000522665	OR5B12	Q96R08	314 aa		11.65	□□□□□ -0.54
NDRG1-223	ENST00000522665	PBDC1	Q9BVG4	233 aa		11.65	□□□□□ -0.54
NDRG1-223	ENST00000522665	SLC25A22	Q9H936	323 aa		11.65	□□□□□ -0.54
NDRG1-223	ENST00000522665	DOK5	Q9P104	306 aa		11.65	□□□□□ -0.54
NDRG1-223	ENST00000522665	PUS1	Q9Y606	427 aa	Known RBP eCLIP	11.65	□□□□□ -0.54
NDRG1-223	ENST00000522665	HAX1	O00165	279 aa		11.64	□□□□□ -0.55
NDRG1-223	ENST00000522665	HBE1	P02100	147 aa		11.64	□□□□□ -0.55
NDRG1-223	ENST00000522665	TAS2R45	P59539	299 aa		11.64	□□□□□ -0.55
NDRG1-223	ENST00000522665	TCTEX1D4	Q5JR98	221 aa		11.64	□□□□□ -0.55
NDRG1-223	ENST00000522665	PFDN2	Q9UHV9	154 aa		11.64	□□□□□ -0.55
NDRG1-223	ENST00000522665	RNF24	Q9Y225	148 aa		11.64	□□□□□ -0.55
NDRG1-223	ENST00000522665	FUT9	Q9Y231	359 aa		11.64	□□□□□ -0.55
NDRG1-223	ENST00000522665	HIGD1A	Q9Y241	93 aa		11.64	□□□□□ -0.55
NDRG1-223	ENST00000522665	TSSC4	Q9Y5U2	329 aa	Predicted RBP	11.64	□□□□□ -0.55
NDRG1-223	ENST00000522665	MAP1LC3B2	A6NCE7	125 aa		11.63	□□□□□ -0.55
NDRG1-223	ENST00000522665	NUDT19	A8MXV4	375 aa		11.63	□□□□□ -0.55
NDRG1-223	ENST00000522665	NDUFA4	O00483	81 aa		11.63	□□□□□ -0.55
NDRG1-223	ENST00000522665	TRBV12-3	P01733	135 aa		11.63	□□□□□ -0.55
NDRG1-223	ENST00000522665	FAM78B	Q5VT40	261 aa		11.63	□□□□□ -0.55
NDRG1-223	ENST00000522665	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	11.63	□□□□□ -0.55
NDRG1-223	ENST00000522665	MBD3L1	Q8WWY6	194 aa		11.63	□□□□□ -0.55
NDRG1-223	ENST00000522665	RAB24	Q969Q5	203 aa		11.63	□□□□□ -0.55
NDRG1-223	ENST00000522665	MAP1LC3B	Q9GZQ8	125 aa		11.63	□□□□□ -0.55
NDRG1-223	ENST00000522665	TRAV1-1	A0A0B4J248	108 aa		11.62	□□□□□ -0.55
NDRG1-223	ENST00000522665		I3L521	148 aa		11.62	□□□□□ -0.55
NDRG1-223	ENST00000522665	CD28	P10747	220 aa		11.62	□□□□□ -0.55
NDRG1-223	ENST00000522665	ZNF726P1	Q15940	193 aa		11.62	□□□□□ -0.55
NDRG1-223	ENST00000522665	RPEL1	Q2QD12	228 aa		11.62	□□□□□ -0.55
NDRG1-223	ENST00000522665	FAM106A	Q4KMX7	169 aa		11.62	□□□□□ -0.55
NDRG1-223	ENST00000522665	KHDC3L	Q587J8	217 aa		11.62	□□□□□ -0.55
NDRG1-223	ENST00000522665	TOMM20L	Q6UXN7	152 aa		11.62	□□□□□ -0.55
NDRG1-223	ENST00000522665	KLHL30-AS1	Q8NEE0	82 aa		11.62	□□□□□ -0.55
NDRG1-223	ENST00000522665	SFT2D1	Q8WV19	159 aa		11.62	□□□□□ -0.55
NDRG1-223	ENST00000522665	PCNP	Q8WW12	178 aa	Known RBP	11.62	□□□□□ -0.55
NDRG1-223	ENST00000522665	TMEM37	Q8WXS4	190 aa		11.62	□□□□□ -0.55
NDRG1-223	ENST00000522665	ZFAND3	Q9H8U3	227 aa		11.62	□□□□□ -0.55
NDRG1-223	ENST00000522665	SEPSECS	Q9HD40	501 aa	Known RBP	11.62	□□□□□ -0.55
NDRG1-223	ENST00000522665	TECR	Q9NZ01	308 aa	Known RBP	11.62	□□□□□ -0.55
NDRG1-223	ENST00000522665	MRPL27	Q9P0M9	148 aa	Known RBP	11.62	□□□□□ -0.55
NDRG1-223	ENST00000522665	RABAC1	Q9UI14	185 aa		11.62	□□□□□ -0.55
NDRG1-223	ENST00000522665	IGHV3-35	A0A0C4DH35	117 aa		11.61	□□□□□ -0.55
NDRG1-223	ENST00000522665	HSPB1	P04792	205 aa	Known RBP	11.61	□□□□□ -0.55
NDRG1-223	ENST00000522665	ZP3	P21754	424 aa		11.61	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms