RNA–Protein interactions for RNA: ENST00000498814.1

CPNE1-228, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-228ENST00000498814 SMCO3A2RU48 225 aa11.72□□□□□ -0.53
CPNE1-228ENST00000498814 CST7O76096 145 aa11.72□□□□□ -0.53
CPNE1-228ENST00000498814 MPC2O95563 127 aa11.72□□□□□ -0.53
CPNE1-228ENST00000498814 IL4P05112 153 aa11.72□□□□□ -0.53
CPNE1-228ENST00000498814 PET100P0DJ07 73 aa11.72□□□□□ -0.53
CPNE1-228ENST00000498814 CRYBB3P26998 211 aa11.72□□□□□ -0.53
CPNE1-228ENST00000498814 P2RY1P47900 373 aa11.72□□□□□ -0.53
CPNE1-228ENST00000498814 RRAS2P62070 204 aaPredicted RBP11.72□□□□□ -0.53
CPNE1-228ENST00000498814 STX12Q86Y82 276 aa11.72□□□□□ -0.53
CPNE1-228ENST00000498814 METTL26Q96S19 204 aa11.72□□□□□ -0.53
CPNE1-228ENST00000498814 RNF126Q9BV68 326 aa11.72□□□□□ -0.53
CPNE1-228ENST00000498814 VSIRQ9H7M9 311 aa11.72□□□□□ -0.53
CPNE1-228ENST00000498814 SELENOKQ9Y6D0 94 aa11.72□□□□□ -0.53
CPNE1-228ENST00000498814 IGHV3-49A0A0A0MS15 119 aa11.71□□□□□ -0.53
CPNE1-228ENST00000498814 A0A1W2PS18 150 aa11.71□□□□□ -0.53
CPNE1-228ENST00000498814 CFDP00746 253 aaPredicted RBP11.71□□□□□ -0.53
CPNE1-228ENST00000498814 APOHP02749 345 aaPredicted RBP11.71□□□□□ -0.53
CPNE1-228ENST00000498814 S100A11P31949 105 aa11.71□□□□□ -0.53
CPNE1-228ENST00000498814 SLC38A11Q08AI6 406 aa11.71□□□□□ -0.53
CPNE1-228ENST00000498814 USF2Q15853 346 aaPredicted RBP11.71□□□□□ -0.53
CPNE1-228ENST00000498814 LAMTOR1Q6IAA8 161 aa11.71□□□□□ -0.53
CPNE1-228ENST00000498814 RBPMS2Q6ZRY4 209 aaKnown RBP11.71□□□□□ -0.53
CPNE1-228ENST00000498814 MRAPQ8TCY5 172 aa11.71□□□□□ -0.53
CPNE1-228ENST00000498814 ASB13Q8WXK3 278 aa11.71□□□□□ -0.53
CPNE1-228ENST00000498814 RNF125Q96EQ8 232 aa11.71□□□□□ -0.53
CPNE1-228ENST00000498814 SLC25A31Q9H0C2 315 aa11.71□□□□□ -0.53
CPNE1-228ENST00000498814 LSM4Q9Y4Z0 139 aaKnown RBP11.71□□□□□ -0.53
CPNE1-228ENST00000498814 U3KQE9 123 aa11.71□□□□□ -0.53
CPNE1-228ENST00000498814 IGHV3OR16-13A0A075B7E8 117 aa11.7□□□□□ -0.54
CPNE1-228ENST00000498814 IGHV3-74A0A0B4J1X5 117 aa11.7□□□□□ -0.54
CPNE1-228ENST00000498814 TSPAN4O14817 238 aa11.7□□□□□ -0.54
CPNE1-228ENST00000498814 CD5P06127 495 aa11.7□□□□□ -0.54
CPNE1-228ENST00000498814 HNRNPCP07910 306 aaKnown RBP eCLIP11.7□□□□□ -0.54
CPNE1-228ENST00000498814 HBG1P69891 147 aa11.7□□□□□ -0.54
CPNE1-228ENST00000498814 HBG2P69892 147 aa11.7□□□□□ -0.54
CPNE1-228ENST00000498814 GUCA2BQ16661 112 aa11.7□□□□□ -0.54
CPNE1-228ENST00000498814 TEPPQ6URK8 271 aa11.7□□□□□ -0.54
CPNE1-228ENST00000498814 TMEM217Q8N7C4 229 aa11.7□□□□□ -0.54
CPNE1-228ENST00000498814 ST8SIA2Q92186 375 aa11.7□□□□□ -0.54
CPNE1-228ENST00000498814 NARS2Q96I59 477 aaKnown RBP11.7□□□□□ -0.54
CPNE1-228ENST00000498814 RNF2Q99496 336 aa11.7□□□□□ -0.54
CPNE1-228ENST00000498814 TMEM231Q9H6L2 316 aa11.7□□□□□ -0.54
CPNE1-228ENST00000498814 GIPP09681 153 aaPredicted RBP11.69□□□□□ -0.54
CPNE1-228ENST00000498814 OR2F1Q13607 317 aa11.69□□□□□ -0.54
CPNE1-228ENST00000498814 ATP6V1FQ16864 119 aa11.69□□□□□ -0.54
CPNE1-228ENST00000498814 VWC2Q2TAL6 325 aa11.69□□□□□ -0.54
CPNE1-228ENST00000498814 FAM90A2PQ658T7 463 aa11.69□□□□□ -0.54
CPNE1-228ENST00000498814 GTSCR1Q86UQ5 136 aa11.69□□□□□ -0.54
CPNE1-228ENST00000498814 Q8N1Y9 231 aa11.69□□□□□ -0.54
CPNE1-228ENST00000498814 LILRB2Q8N423 598 aa11.69□□□□□ -0.54
CPNE1-228ENST00000498814 BPIFCQ8NFQ6 507 aa11.69□□□□□ -0.54
CPNE1-228ENST00000498814 RABAC1Q9UI14 185 aa11.69□□□□□ -0.54
CPNE1-228ENST00000498814 LYL1P12980 280 aa11.68□□□□□ -0.54
CPNE1-228ENST00000498814 EIF2B2P49770 351 aaKnown RBP11.68□□□□□ -0.54
CPNE1-228ENST00000498814 SELENOTP62341 195 aa11.68□□□□□ -0.54
CPNE1-228ENST00000498814 EWSR1Q01844 656 aaKnown RBP eCLIP11.68□□□□□ -0.54
CPNE1-228ENST00000498814 NHLH2Q02577 135 aa11.68□□□□□ -0.54
CPNE1-228ENST00000498814 BAXQ07812 192 aa11.68□□□□□ -0.54
CPNE1-228ENST00000498814 DEFB121Q5J5C9 76 aa11.68□□□□□ -0.54
CPNE1-228ENST00000498814 TMEM182Q6ZP80 229 aaPredicted RBP11.68□□□□□ -0.54
CPNE1-228ENST00000498814 CYP2G1PQ6ZSU1 146 aa11.68□□□□□ -0.54
CPNE1-228ENST00000498814 GRAMD2BQ96HH9 432 aa11.68□□□□□ -0.54
CPNE1-228ENST00000498814 SPAG8Q99932 426 aaPredicted RBP11.68□□□□□ -0.54
CPNE1-228ENST00000498814 PBDC1Q9BVG4 233 aa11.68□□□□□ -0.54
CPNE1-228ENST00000498814 TMEM147Q9BVK8 224 aa11.68□□□□□ -0.54
CPNE1-228ENST00000498814 UQCC1Q9NVA1 299 aa11.68□□□□□ -0.54
CPNE1-228ENST00000498814 PRKDCP78527 4128 aaKnown RBP11.67□□□□□ -0.54
CPNE1-228ENST00000498814 IGHV3-66A0A0C4DH42 116 aa11.67□□□□□ -0.54
CPNE1-228ENST00000498814 GATA2P23769 480 aaPredicted RBP11.67□□□□□ -0.54
CPNE1-228ENST00000498814 NUP62P37198 522 aaPredicted RBP11.67□□□□□ -0.54
CPNE1-228ENST00000498814 LYZP61626 148 aa11.67□□□□□ -0.54
CPNE1-228ENST00000498814 TCF24Q7RTU0 167 aa11.67□□□□□ -0.54
CPNE1-228ENST00000498814 THAP6Q8TBB0 222 aa11.67□□□□□ -0.54
CPNE1-228ENST00000498814 MBD2Q9UBB5 411 aa11.67□□□□□ -0.54
CPNE1-228ENST00000498814 PFDN2Q9UHV9 154 aa11.67□□□□□ -0.54
CPNE1-228ENST00000498814 SMAD5-AS1Q9Y6J3 95 aa11.67□□□□□ -0.54
CPNE1-228ENST00000498814 BUB3O43684 328 aa11.66□□□□□ -0.54
CPNE1-228ENST00000498814 DFFBO76075 338 aa11.66□□□□□ -0.54
CPNE1-228ENST00000498814 RAP2BP61225 183 aa11.66□□□□□ -0.54
CPNE1-228ENST00000498814 FGL1Q08830 312 aa11.66□□□□□ -0.54
CPNE1-228ENST00000498814 C16orf54Q6UWD8 224 aa11.66□□□□□ -0.54
CPNE1-228ENST00000498814 OR5C1Q8NGR4 320 aa11.66□□□□□ -0.54
CPNE1-228ENST00000498814 NEURL2Q9BR09 285 aa11.66□□□□□ -0.54
CPNE1-228ENST00000498814 SLC45A2Q9UMX9 530 aa11.66□□□□□ -0.54
CPNE1-228ENST00000498814 WDR83OSQ9Y284 106 aa11.66□□□□□ -0.54
CPNE1-228ENST00000498814 OR4C46A6NHA9 309 aa11.65□□□□□ -0.54
CPNE1-228ENST00000498814 AGPAT2O15120 278 aa11.65□□□□□ -0.54
CPNE1-228ENST00000498814 CD7P09564 240 aa11.65□□□□□ -0.54
CPNE1-228ENST00000498814 RPL12P30050 165 aaKnown RBP11.65□□□□□ -0.54
CPNE1-228ENST00000498814 CD81P60033 236 aa11.65□□□□□ -0.54
CPNE1-228ENST00000498814 PLP1P60201 277 aa11.65□□□□□ -0.54
CPNE1-228ENST00000498814 RAB31Q13636 194 aa11.65□□□□□ -0.54
CPNE1-228ENST00000498814 ZNF546Q86UE3 836 aa11.65□□□□□ -0.54
CPNE1-228ENST00000498814 GLMPQ8WWB7 406 aa11.65□□□□□ -0.54
CPNE1-228ENST00000498814 MGST2Q99735 147 aa11.65□□□□□ -0.54
CPNE1-228ENST00000498814 UBE2L5PA0A1B0GUS4 154 aa11.64□□□□□ -0.55
CPNE1-228ENST00000498814 HELTA6NFD8 242 aa11.64□□□□□ -0.55
CPNE1-228ENST00000498814 LINC00869P0C866 280 aa11.64□□□□□ -0.55
CPNE1-228ENST00000498814 ORM2P19652 201 aa11.64□□□□□ -0.55
CPNE1-228ENST00000498814 CAMLGP49069 296 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 409 ms