RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 TMEM61Q8N0U2 210 aa9.42□□□□□ -0.9
TRA2A-209ENST00000494255 GGACTQ9BVM4 153 aa9.42□□□□□ -0.9
TRA2A-209ENST00000494255 SLC25A31Q9H0C2 315 aa9.42□□□□□ -0.9
TRA2A-209ENST00000494255 IGHV3OR16-13A0A075B7E8 117 aa9.41□□□□□ -0.9
TRA2A-209ENST00000494255 IGHV3-74A0A0B4J1X5 117 aa9.41□□□□□ -0.9
TRA2A-209ENST00000494255 CHEK1O14757 476 aa9.41□□□□□ -0.9
TRA2A-209ENST00000494255 HNRNPCP07910 306 aaKnown RBP eCLIP9.41□□□□□ -0.9
TRA2A-209ENST00000494255 SULT1A1P50225 295 aa9.41□□□□□ -0.9
TRA2A-209ENST00000494255 HBG1P69891 147 aa9.41□□□□□ -0.9
TRA2A-209ENST00000494255 HBG2P69892 147 aa9.41□□□□□ -0.9
TRA2A-209ENST00000494255 ZNF90Q03938 601 aa9.41□□□□□ -0.9
TRA2A-209ENST00000494255 ARL16Q0P5N6 197 aa9.41□□□□□ -0.9
TRA2A-209ENST00000494255 OR2F1Q13607 317 aa9.41□□□□□ -0.9
TRA2A-209ENST00000494255 FCN2Q15485 313 aa9.41□□□□□ -0.9
TRA2A-209ENST00000494255 LILRB2Q8N423 598 aa9.41□□□□□ -0.9
TRA2A-209ENST00000494255 TMEM252Q8N6L7 170 aa9.41□□□□□ -0.9
TRA2A-209ENST00000494255 TMEM217Q8N7C4 229 aa9.41□□□□□ -0.9
TRA2A-209ENST00000494255 WDR89Q96FK6 387 aaPredicted RBP9.41□□□□□ -0.9
TRA2A-209ENST00000494255 NPVFQ9HCQ7 196 aa9.41□□□□□ -0.9
TRA2A-209ENST00000494255 OR5AC2Q9NZP5 309 aa9.41□□□□□ -0.9
TRA2A-209ENST00000494255 IGKV1OR2-108A0A075B7D4 117 aa9.4□□□□□ -0.9
TRA2A-209ENST00000494255 IGSF23A1L1A6 192 aa9.4□□□□□ -0.9
TRA2A-209ENST00000494255 MPC2O95563 127 aa9.4□□□□□ -0.9
TRA2A-209ENST00000494255 CFDP00746 253 aaPredicted RBP9.4□□□□□ -0.9
TRA2A-209ENST00000494255 CD5P06127 495 aa9.4□□□□□ -0.9
TRA2A-209ENST00000494255 CXCL3P19876 107 aa9.4□□□□□ -0.9
TRA2A-209ENST00000494255 S100A11P31949 105 aa9.4□□□□□ -0.9
TRA2A-209ENST00000494255 P2RY1P47900 373 aa9.4□□□□□ -0.9
TRA2A-209ENST00000494255 BPIFCQ8NFQ6 507 aa9.4□□□□□ -0.9
TRA2A-209ENST00000494255 ST8SIA2Q92186 375 aa9.4□□□□□ -0.9
TRA2A-209ENST00000494255 RNF125Q96EQ8 232 aa9.4□□□□□ -0.9
TRA2A-209ENST00000494255 GRAMD2BQ96HH9 432 aa9.4□□□□□ -0.9
TRA2A-209ENST00000494255 PBDC1Q9BVG4 233 aa9.4□□□□□ -0.9
TRA2A-209ENST00000494255 PFDN2Q9UHV9 154 aa9.4□□□□□ -0.9
TRA2A-209ENST00000494255 RABAC1Q9UI14 185 aa9.4□□□□□ -0.9
TRA2A-209ENST00000494255 ZNF785A8K8V0 405 aa9.39□□□□□ -0.91
TRA2A-209ENST00000494255 H0YIZ8 118 aa9.39□□□□□ -0.91
TRA2A-209ENST00000494255 CRYBB3P26998 211 aa9.39□□□□□ -0.91
TRA2A-209ENST00000494255 LYZP61626 148 aa9.39□□□□□ -0.91
TRA2A-209ENST00000494255 TEPPQ6URK8 271 aa9.39□□□□□ -0.91
TRA2A-209ENST00000494255 OR11H7Q8NGC8 314 aa9.39□□□□□ -0.91
TRA2A-209ENST00000494255 RNF2Q99496 336 aa9.39□□□□□ -0.91
TRA2A-209ENST00000494255 VSIRQ9H7M9 311 aa9.39□□□□□ -0.91
TRA2A-209ENST00000494255 IGHV3-66A0A0C4DH42 116 aa9.39□□□□□ -0.91
TRA2A-209ENST00000494255 APOHP02749 345 aaPredicted RBP9.39□□□□□ -0.91
TRA2A-209ENST00000494255 NUP62P37198 522 aaPredicted RBP9.39□□□□□ -0.91
TRA2A-209ENST00000494255 USF2Q15853 346 aaPredicted RBP9.39□□□□□ -0.91
TRA2A-209ENST00000494255 ATP6V1FQ16864 119 aa9.39□□□□□ -0.91
TRA2A-209ENST00000494255 CYP2G1PQ6ZSU1 146 aa9.39□□□□□ -0.91
TRA2A-209ENST00000494255 TCF24Q7RTU0 167 aa9.39□□□□□ -0.91
TRA2A-209ENST00000494255 ASB13Q8WXK3 278 aa9.39□□□□□ -0.91
TRA2A-209ENST00000494255 SPAG8Q99932 426 aaPredicted RBP9.39□□□□□ -0.91
TRA2A-209ENST00000494255 TMEM147Q9BVK8 224 aa9.39□□□□□ -0.91
TRA2A-209ENST00000494255 UQCC1Q9NVA1 299 aa9.39□□□□□ -0.91
TRA2A-209ENST00000494255 SMAD5-AS1Q9Y6J3 95 aa9.39□□□□□ -0.91
TRA2A-209ENST00000494255 TSPAN4O14817 238 aa9.38□□□□□ -0.91
TRA2A-209ENST00000494255 GIPP09681 153 aaPredicted RBP9.38□□□□□ -0.91
TRA2A-209ENST00000494255 EIF2B2P49770 351 aaKnown RBP9.38□□□□□ -0.91
TRA2A-209ENST00000494255 CD81P60033 236 aa9.38□□□□□ -0.91
TRA2A-209ENST00000494255 SELENOTP62341 195 aa9.38□□□□□ -0.91
TRA2A-209ENST00000494255 EWSR1Q01844 656 aaKnown RBP eCLIP9.38□□□□□ -0.911e-8■□□□□ 8.4
TRA2A-209ENST00000494255 BAXQ07812 192 aa9.38□□□□□ -0.91
TRA2A-209ENST00000494255 RAB31Q13636 194 aa9.38□□□□□ -0.91
TRA2A-209ENST00000494255 THAP6Q8TBB0 222 aa9.38□□□□□ -0.91
TRA2A-209ENST00000494255 PPP1R14BQ96C90 147 aa9.38□□□□□ -0.91
TRA2A-209ENST00000494255 RNF126Q9BV68 326 aa9.38□□□□□ -0.91
TRA2A-209ENST00000494255 MBD2Q9UBB5 411 aa9.38□□□□□ -0.91
TRA2A-209ENST00000494255 LSM4Q9Y4Z0 139 aaKnown RBP9.38□□□□□ -0.91
TRA2A-209ENST00000494255 OR4C46A6NHA9 309 aa9.37□□□□□ -0.91
TRA2A-209ENST00000494255 DFFBO76075 338 aa9.37□□□□□ -0.91
TRA2A-209ENST00000494255 S100A7P31151 101 aa9.37□□□□□ -0.91
TRA2A-209ENST00000494255 RPL11P62913 178 aaKnown RBP9.37□□□□□ -0.91
TRA2A-209ENST00000494255 PAFAH1B2P68402 229 aa9.37□□□□□ -0.91
TRA2A-209ENST00000494255 FGL1Q08830 312 aa9.37□□□□□ -0.91
TRA2A-209ENST00000494255 NEURL2Q9BR09 285 aa9.37□□□□□ -0.91
TRA2A-209ENST00000494255 U3KQE9 123 aa9.37□□□□□ -0.91
TRA2A-209ENST00000494255 UBE2L5PA0A1B0GUS4 154 aa9.36□□□□□ -0.91
TRA2A-209ENST00000494255 RAP2BP61225 183 aa9.36□□□□□ -0.91
TRA2A-209ENST00000494255 NHLH2Q02577 135 aa9.36□□□□□ -0.91
TRA2A-209ENST00000494255 ZNF546Q86UE3 836 aa9.36□□□□□ -0.91
TRA2A-209ENST00000494255 MEGF8Q7Z7M0 2845 aa9.36□□□□□ -0.91
TRA2A-209ENST00000494255 IGKV3-7A0A075B6H7 116 aa9.36□□□□□ -0.91
TRA2A-209ENST00000494255 HELTA6NFD8 242 aa9.36□□□□□ -0.91
TRA2A-209ENST00000494255 DNASE2O00115 360 aaPredicted RBP9.36□□□□□ -0.91
TRA2A-209ENST00000494255 AGPAT2O15120 278 aa9.36□□□□□ -0.91
TRA2A-209ENST00000494255 CD7P09564 240 aa9.36□□□□□ -0.91
TRA2A-209ENST00000494255 LINC00869P0C866 280 aa9.36□□□□□ -0.91
TRA2A-209ENST00000494255 ORM2P19652 201 aa9.36□□□□□ -0.91
TRA2A-209ENST00000494255 GATA2P23769 480 aaPredicted RBP9.36□□□□□ -0.91
TRA2A-209ENST00000494255 RPL12P30050 165 aaKnown RBP9.36□□□□□ -0.91
TRA2A-209ENST00000494255 VWC2Q2TAL6 325 aa9.36□□□□□ -0.91
TRA2A-209ENST00000494255 FAM90A2PQ658T7 463 aa9.36□□□□□ -0.91
TRA2A-209ENST00000494255 C16orf54Q6UWD8 224 aa9.36□□□□□ -0.91
TRA2A-209ENST00000494255 Q8N1Y9 231 aa9.36□□□□□ -0.91
TRA2A-209ENST00000494255 OR5C1Q8NGR4 320 aa9.36□□□□□ -0.91
TRA2A-209ENST00000494255 OR1B1Q8NGR6 318 aa9.36□□□□□ -0.91
TRA2A-209ENST00000494255 SLC45A2Q9UMX9 530 aa9.36□□□□□ -0.91
TRA2A-209ENST00000494255 WDR83OSQ9Y284 106 aa9.36□□□□□ -0.91
TRA2A-209ENST00000494255 LYL1P12980 280 aa9.35□□□□□ -0.91
TRA2A-209ENST00000494255 TFPI2P48307 235 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms