RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 OR2T35Q8NGX2 323 aa-0.33□□□□□ -2.46
CCDC93-209ENST00000488908 OR2T10Q8NGZ9 312 aa-0.33□□□□□ -2.46
CCDC93-209ENST00000488908 CANT1Q8WVQ1 401 aa-0.33□□□□□ -2.46
CCDC93-209ENST00000488908 OR52E6Q96RD3 313 aa-0.33□□□□□ -2.46
CCDC93-209ENST00000488908 C20orf27Q9GZN8 174 aa-0.33□□□□□ -2.46
CCDC93-209ENST00000488908 C11orf68Q9H3H3 251 aaKnown RBP-0.33□□□□□ -2.46
CCDC93-209ENST00000488908 TMEM138Q9NPI0 162 aa-0.33□□□□□ -2.46
CCDC93-209ENST00000488908 FGFR1OP2Q9NVK5 253 aa-0.33□□□□□ -2.46
CCDC93-209ENST00000488908 LSM5Q9Y4Y9 91 aaKnown RBP-0.33□□□□□ -2.46
CCDC93-209ENST00000488908 TMEM56-RWDD3S4R434 201 aa-0.33□□□□□ -2.46
CCDC93-209ENST00000488908 UNC79Q9P2D8 2635 aa-0.33□□□□□ -2.46
CCDC93-209ENST00000488908 DCHS2Q6V1P9 2916 aa-0.33□□□□□ -2.46
CCDC93-209ENST00000488908 HERC1Q15751 4861 aa-0.33□□□□□ -2.46
CCDC93-209ENST00000488908 TEP1Q99973 2627 aaKnown RBP-0.34□□□□□ -2.46
CCDC93-209ENST00000488908 SIP14410 1827 aa-0.34□□□□□ -2.46
CCDC93-209ENST00000488908 MYH10P35580 1976 aa-0.34□□□□□ -2.46
CCDC93-209ENST00000488908 ABCA12Q86UK0 2595 aa-0.34□□□□□ -2.46
CCDC93-209ENST00000488908 A0A087X0T9 212 aa-0.34□□□□□ -2.46
CCDC93-209ENST00000488908 EXOC1LA0A1B0GW35 172 aa-0.34□□□□□ -2.46
CCDC93-209ENST00000488908 EEF1E1-BLOC1S5C9J1V9 151 aa-0.34□□□□□ -2.46
CCDC93-209ENST00000488908 F8W1H4 67 aa-0.34□□□□□ -2.46
CCDC93-209ENST00000488908 CALUO43852 315 aaPredicted RBP-0.34□□□□□ -2.46
CCDC93-209ENST00000488908 NDUFS6O75380 124 aaKnown RBP-0.34□□□□□ -2.46
CCDC93-209ENST00000488908 OCM2P0CE71 109 aa-0.34□□□□□ -2.46
CCDC93-209ENST00000488908 PSME3P61289 254 aa-0.34□□□□□ -2.46
CCDC93-209ENST00000488908 RYR3Q15413 4870 aa-0.34□□□□□ -2.46
CCDC93-209ENST00000488908 KRTAP20-2Q3LI61 65 aa-0.34□□□□□ -2.46
CCDC93-209ENST00000488908 SFXN4Q6P4A7 337 aa-0.34□□□□□ -2.46
CCDC93-209ENST00000488908 FANCMQ8IYD8 2048 aa-0.34□□□□□ -2.46
CCDC93-209ENST00000488908 KLK6Q92876 244 aa-0.34□□□□□ -2.46
CCDC93-209ENST00000488908 RAB8BQ92930 207 aa-0.34□□□□□ -2.46
CCDC93-209ENST00000488908 LINC00467Q9BRT7 94 aa-0.34□□□□□ -2.46
CCDC93-209ENST00000488908 UPF3BQ9BZI7 483 aaKnown RBP-0.34□□□□□ -2.46
CCDC93-209ENST00000488908 BCL2L10Q9HD36 194 aa-0.34□□□□□ -2.46
CCDC93-209ENST00000488908 CYSLTR1Q9Y271 337 aa-0.34□□□□□ -2.46
CCDC93-209ENST00000488908 UTP11Q9Y3A2 253 aaKnown RBP-0.34□□□□□ -2.46
CCDC93-209ENST00000488908 NUP155O75694 1391 aa-0.34□□□□□ -2.46
CCDC93-209ENST00000488908 CECR2Q9BXF3 1484 aa-0.35□□□□□ -2.46
CCDC93-209ENST00000488908 DOCK5Q9H7D0 1870 aa-0.35□□□□□ -2.46
CCDC93-209ENST00000488908 MAP1AP78559 2803 aaPredicted RBP-0.35□□□□□ -2.47
CCDC93-209ENST00000488908 SPTBP11277 2137 aa-0.35□□□□□ -2.47
CCDC93-209ENST00000488908 LRP2P98164 4655 aa-0.35□□□□□ -2.47
CCDC93-209ENST00000488908 TENM2Q9NT68 2774 aa-0.35□□□□□ -2.47
CCDC93-209ENST00000488908 M0QZ92 97 aa-0.35□□□□□ -2.47
CCDC93-209ENST00000488908 PSMD12O00232 456 aaPredicted RBP-0.35□□□□□ -2.47
CCDC93-209ENST00000488908 SLC16A4O15374 487 aa-0.35□□□□□ -2.47
CCDC93-209ENST00000488908 OR2J2O76002 312 aa-0.35□□□□□ -2.47
CCDC93-209ENST00000488908 COX7CP15954 63 aa-0.35□□□□□ -2.47
CCDC93-209ENST00000488908 RPS12P25398 132 aaKnown RBP-0.35□□□□□ -2.47
CCDC93-209ENST00000488908 CASP1P29466 404 aa-0.35□□□□□ -2.47
CCDC93-209ENST00000488908 BLVRAP53004 296 aa-0.35□□□□□ -2.47
CCDC93-209ENST00000488908 SNRPD2P62316 118 aaKnown RBP-0.35□□□□□ -2.47
CCDC93-209ENST00000488908 Q5BKY6 102 aa-0.35□□□□□ -2.47
CCDC93-209ENST00000488908 HIST2H3PS2Q5TEC6 136 aa-0.35□□□□□ -2.47
CCDC93-209ENST00000488908 GLIPR1L1Q6UWM5 242 aa-0.35□□□□□ -2.47
CCDC93-209ENST00000488908 ALKAL1Q6UXT8 129 aa-0.35□□□□□ -2.47
CCDC93-209ENST00000488908 C4orf22Q6V702 233 aa-0.35□□□□□ -2.47
CCDC93-209ENST00000488908 ZNF833PQ6ZTB9 187 aa-0.35□□□□□ -2.47
CCDC93-209ENST00000488908 PRR15Q8IV56 129 aa-0.35□□□□□ -2.47
CCDC93-209ENST00000488908 FAM9CQ8IZT9 166 aa-0.35□□□□□ -2.47
CCDC93-209ENST00000488908 ANKRD29Q8N6D5 301 aa-0.35□□□□□ -2.47
CCDC93-209ENST00000488908 HIST1H2BLQ99880 126 aa-0.35□□□□□ -2.47
CCDC93-209ENST00000488908 DRC3Q9H069 523 aa-0.35□□□□□ -2.47
CCDC93-209ENST00000488908 OR51I1Q9H343 314 aa-0.35□□□□□ -2.47
CCDC93-209ENST00000488908 IMP3Q9NV31 184 aaKnown RBP-0.35□□□□□ -2.47
CCDC93-209ENST00000488908 HSPB8Q9UJY1 196 aa-0.35□□□□□ -2.47
CCDC93-209ENST00000488908 TNXBP22105 4242 aa-0.35□□□□□ -2.47
CCDC93-209ENST00000488908 LAMA2P24043 3122 aaKnown RBP-0.35□□□□□ -2.47
CCDC93-209ENST00000488908 LOC285556D6RIA3 1793 aa-0.35□□□□□ -2.47
CCDC93-209ENST00000488908 ABCA2Q9BZC7 2435 aa-0.35□□□□□ -2.47
CCDC93-209ENST00000488908 PLXNA4Q9HCM2 1894 aa-0.35□□□□□ -2.47
CCDC93-209ENST00000488908 FAT1Q14517 4588 aa-0.35□□□□□ -2.47
CCDC93-209ENST00000488908 FREM3P0C091 2139 aa-0.35□□□□□ -2.47
CCDC93-209ENST00000488908 ZGRF1Q86YA3 2104 aa-0.35□□□□□ -2.47
CCDC93-209ENST00000488908 DSPP15924 2871 aaKnown RBP-0.35□□□□□ -2.47
CCDC93-209ENST00000488908 EVC2Q86UK5 1308 aa-0.36□□□□□ -2.47
CCDC93-209ENST00000488908 MED1Q15648 1581 aaPredicted RBP-0.36□□□□□ -2.47
CCDC93-209ENST00000488908 TRAV10A0A0B4J240 114 aa-0.36□□□□□ -2.47
CCDC93-209ENST00000488908 ZNF727A8MUV8 499 aa-0.36□□□□□ -2.47
CCDC93-209ENST00000488908 LRRN3E7EW58 273 aa-0.36□□□□□ -2.47
CCDC93-209ENST00000488908 H0Y980 276 aa-0.36□□□□□ -2.47
CCDC93-209ENST00000488908 J3QRK9 145 aa-0.36□□□□□ -2.47
CCDC93-209ENST00000488908 DCTN3O75935 186 aa-0.36□□□□□ -2.47
CCDC93-209ENST00000488908 GADD45GO95257 159 aa-0.36□□□□□ -2.47
CCDC93-209ENST00000488908 CRYZL1O95825 349 aa-0.36□□□□□ -2.47
CCDC93-209ENST00000488908 CD3DP04234 171 aa-0.36□□□□□ -2.47
CCDC93-209ENST00000488908 RBP1P09455 135 aa-0.36□□□□□ -2.47
CCDC93-209ENST00000488908 SMIM10L2AP0DMW4 78 aa-0.36□□□□□ -2.47
CCDC93-209ENST00000488908 SMIM10L2BP0DMW5 78 aa-0.36□□□□□ -2.47
CCDC93-209ENST00000488908 HIST1H1TP22492 207 aaPredicted RBP-0.36□□□□□ -2.47
CCDC93-209ENST00000488908 AP3S2P59780 193 aa-0.36□□□□□ -2.47
CCDC93-209ENST00000488908 UBE2G2P60604 165 aa-0.36□□□□□ -2.47
CCDC93-209ENST00000488908 HIST3H3Q16695 136 aa-0.36□□□□□ -2.47
CCDC93-209ENST00000488908 KRTAP19-8Q3LI54 63 aa-0.36□□□□□ -2.47
CCDC93-209ENST00000488908 SPOPLQ6IQ16 392 aa-0.36□□□□□ -2.47
CCDC93-209ENST00000488908 PLAC4Q8WY50 150 aa-0.36□□□□□ -2.47
CCDC93-209ENST00000488908 SLC35B4Q969S0 331 aa-0.36□□□□□ -2.47
CCDC93-209ENST00000488908 C2orf50Q96LR7 162 aa-0.36□□□□□ -2.47
CCDC93-209ENST00000488908 WFDC10AQ9H1F0 79 aa-0.36□□□□□ -2.47
CCDC93-209ENST00000488908 CMTM6Q9NX76 183 aa-0.36□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 415 ms