RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 OLIG3Q7RTU3 272 aa1.74□□□□□ -2.13
ITGB1-214ENST00000488427 MRPL21Q7Z2W9 205 aaKnown RBP1.74□□□□□ -2.13
ITGB1-214ENST00000488427 C10orf107Q8IVU9 208 aa1.74□□□□□ -2.13
ITGB1-214ENST00000488427 OR5D16Q8NGK9 328 aa1.74□□□□□ -2.13
ITGB1-214ENST00000488427 OR8S1Q8NH09 359 aa1.74□□□□□ -2.13
ITGB1-214ENST00000488427 GLYATL2Q8WU03 294 aa1.74□□□□□ -2.13
ITGB1-214ENST00000488427 OR7D2Q96RA2 312 aa1.74□□□□□ -2.13
ITGB1-214ENST00000488427 VAX2Q9UIW0 290 aa1.74□□□□□ -2.13
ITGB1-214ENST00000488427 GUCA1BQ9UMX6 200 aa1.74□□□□□ -2.13
ITGB1-214ENST00000488427 SLC7A11Q9UPY5 501 aa1.74□□□□□ -2.13
ITGB1-214ENST00000488427 TIMM22Q9Y584 194 aa1.74□□□□□ -2.13
ITGB1-214ENST00000488427 BZW2Q9Y6E2 419 aaKnown RBP1.74□□□□□ -2.13
ITGB1-214ENST00000488427 TRAV36DV7A0A075B6V5 113 aa1.73□□□□□ -2.13
ITGB1-214ENST00000488427 TRAPPC13A5PLN9 417 aa1.73□□□□□ -2.13
ITGB1-214ENST00000488427 C2orf70A6NJV1 201 aa1.73□□□□□ -2.13
ITGB1-214ENST00000488427 CD300LBA8K4G0 201 aa1.73□□□□□ -2.13
ITGB1-214ENST00000488427 H7C2Y5 167 aa1.73□□□□□ -2.13
ITGB1-214ENST00000488427 CDIPTO14735 213 aa1.73□□□□□ -2.13
ITGB1-214ENST00000488427 AKR7A2O43488 359 aa1.73□□□□□ -2.13
ITGB1-214ENST00000488427 ANXA8P13928 327 aa1.73□□□□□ -2.13
ITGB1-214ENST00000488427 EDDM3BP56851 147 aa1.73□□□□□ -2.13
ITGB1-214ENST00000488427 TAS2R60P59551 318 aa1.73□□□□□ -2.13
ITGB1-214ENST00000488427 ATP6V0D1P61421 351 aa1.73□□□□□ -2.13
ITGB1-214ENST00000488427 HIST3H3Q16695 136 aa1.73□□□□□ -2.13
ITGB1-214ENST00000488427 ANXA8L1Q5VT79 327 aa1.73□□□□□ -2.13
ITGB1-214ENST00000488427 ZNF738Q8NE65 137 aa1.73□□□□□ -2.13
ITGB1-214ENST00000488427 OR1M1Q8NGA1 313 aa1.73□□□□□ -2.13
ITGB1-214ENST00000488427 OR2T10Q8NGZ9 312 aa1.73□□□□□ -2.13
ITGB1-214ENST00000488427 GPX8Q8TED1 209 aa1.73□□□□□ -2.13
ITGB1-214ENST00000488427 OR2A7Q96R45 310 aa1.73□□□□□ -2.13
ITGB1-214ENST00000488427 DPY30Q9C005 99 aa1.73□□□□□ -2.13
ITGB1-214ENST00000488427 CHST5Q9GZS9 411 aa1.73□□□□□ -2.13
ITGB1-214ENST00000488427 SND1-IT1Q9HBX3 110 aa1.73□□□□□ -2.13
ITGB1-214ENST00000488427 NAGKQ9UJ70 344 aa1.73□□□□□ -2.13
ITGB1-214ENST00000488427 ERGIC3Q9Y282 383 aa1.73□□□□□ -2.13
ITGB1-214ENST00000488427 AMMECR1Q9Y4X0 333 aaPredicted RBP1.73□□□□□ -2.13
ITGB1-214ENST00000488427 OR6C6A6NF89 314 aa1.72□□□□□ -2.13
ITGB1-214ENST00000488427 GGTLC3B5MD39 225 aa1.72□□□□□ -2.13
ITGB1-214ENST00000488427 J3QT63 122 aa1.72□□□□□ -2.13
ITGB1-214ENST00000488427 PLPP3O14495 311 aa1.72□□□□□ -2.13
ITGB1-214ENST00000488427 S1PR2O95136 353 aa1.72□□□□□ -2.13
ITGB1-214ENST00000488427 TRGV3P03979 118 aa1.72□□□□□ -2.13
ITGB1-214ENST00000488427 SPART-AS1P0CW21 52 aa1.72□□□□□ -2.13
ITGB1-214ENST00000488427 NEFHP12036 1026 aa1.72□□□□□ -2.13
ITGB1-214ENST00000488427 PMCHP20382 165 aa1.72□□□□□ -2.13
ITGB1-214ENST00000488427 BLVRBP30043 206 aaPredicted RBP1.72□□□□□ -2.13
ITGB1-214ENST00000488427 MAP2K4P45985 399 aa1.72□□□□□ -2.13
ITGB1-214ENST00000488427 HPCAP84074 193 aa1.72□□□□□ -2.13
ITGB1-214ENST00000488427 GNA13Q14344 377 aa1.72□□□□□ -2.13
ITGB1-214ENST00000488427 PMVKQ15126 192 aa1.72□□□□□ -2.13
ITGB1-214ENST00000488427 IBA57Q5T440 356 aaKnown RBP1.72□□□□□ -2.13
ITGB1-214ENST00000488427 CD200R1LQ6Q8B3 271 aa1.72□□□□□ -2.13
ITGB1-214ENST00000488427 LYZL2Q7Z4W2 148 aa1.72□□□□□ -2.13
ITGB1-214ENST00000488427 Q8N6K4 173 aa1.72□□□□□ -2.13
ITGB1-214ENST00000488427 STAG3L4Q8TBR4 150 aa1.72□□□□□ -2.13
ITGB1-214ENST00000488427 OR5P2Q8WZ92 322 aa1.72□□□□□ -2.13
ITGB1-214ENST00000488427 SPACA5Q96QH8 159 aa1.72□□□□□ -2.13
ITGB1-214ENST00000488427 TSNAXQ99598 290 aaKnown RBP1.72□□□□□ -2.13
ITGB1-214ENST00000488427 POPDC3Q9HBV1 291 aa1.72□□□□□ -2.13
ITGB1-214ENST00000488427 LINC00846Q9NV44 126 aa1.72□□□□□ -2.13
ITGB1-214ENST00000488427 PEF1Q9UBV8 284 aaKnown RBP1.72□□□□□ -2.13
ITGB1-214ENST00000488427 ORC6Q9Y5N6 252 aa1.72□□□□□ -2.13
ITGB1-214ENST00000488427 ICOSQ9Y6W8 199 aa1.72□□□□□ -2.13
ITGB1-214ENST00000488427 KMT2DO14686 5537 aa1.72□□□□□ -2.13
ITGB1-214ENST00000488427 EXOC1LA0A1B0GW35 172 aa1.71□□□□□ -2.14
ITGB1-214ENST00000488427 hADV38S2A0JD32 116 aa1.71□□□□□ -2.14
ITGB1-214ENST00000488427 RFPL4AA6NLU0 287 aa1.71□□□□□ -2.14
ITGB1-214ENST00000488427 RFPL4AL1F8VTS6 287 aa1.71□□□□□ -2.14
ITGB1-214ENST00000488427 ADAP1O75689 374 aa1.71□□□□□ -2.14
ITGB1-214ENST00000488427 CTSGP08311 255 aa1.71□□□□□ -2.14
ITGB1-214ENST00000488427 TMEM267Q0VDI3 215 aaPredicted RBP1.71□□□□□ -2.14
ITGB1-214ENST00000488427 RAB11BQ15907 218 aa1.71□□□□□ -2.14
ITGB1-214ENST00000488427 ACTBL2Q562R1 376 aa1.71□□□□□ -2.14
ITGB1-214ENST00000488427 TRAPPC6BQ86SZ2 158 aa1.71□□□□□ -2.14
ITGB1-214ENST00000488427 ANGPTL5Q86XS5 388 aa1.71□□□□□ -2.14
ITGB1-214ENST00000488427 AMN1Q8IY45 258 aa1.71□□□□□ -2.14
ITGB1-214ENST00000488427 OR8B12Q8NGG6 310 aa1.71□□□□□ -2.14
ITGB1-214ENST00000488427 OR5J2Q8NH18 312 aa1.71□□□□□ -2.14
ITGB1-214ENST00000488427 CACNG8Q8WXS5 425 aa1.71□□□□□ -2.14
ITGB1-214ENST00000488427 PPCDCQ96CD2 204 aa1.71□□□□□ -2.14
ITGB1-214ENST00000488427 OR52E6Q96RD3 313 aa1.71□□□□□ -2.14
ITGB1-214ENST00000488427 MYCBPQ99417 103 aaPredicted RBP1.71□□□□□ -2.14
ITGB1-214ENST00000488427 UPK3BQ9BT76 320 aa1.71□□□□□ -2.14
ITGB1-214ENST00000488427 SRRQ9GZT4 340 aa1.71□□□□□ -2.14
ITGB1-214ENST00000488427 CST11Q9H112 138 aa1.71□□□□□ -2.14
ITGB1-214ENST00000488427 TLNRD1Q9H1K6 362 aa1.71□□□□□ -2.14
ITGB1-214ENST00000488427 ZNF286AQ9HBT8 521 aa1.71□□□□□ -2.14
ITGB1-214ENST00000488427 ATPIF1Q9UII2 106 aa1.71□□□□□ -2.14
ITGB1-214ENST00000488427 ENPP5Q9UJA9 477 aa1.71□□□□□ -2.14
ITGB1-214ENST00000488427 AP3M1Q9Y2T2 418 aa1.71□□□□□ -2.14
ITGB1-214ENST00000488427 LINC00312Q9Y6C7 94 aa1.71□□□□□ -2.14
ITGB1-214ENST00000488427 IGHV3-21A0A0B4J1V1 117 aa1.7□□□□□ -2.14
ITGB1-214ENST00000488427 IGKV1D-43A0A0B4J1Z2 117 aa1.7□□□□□ -2.14
ITGB1-214ENST00000488427 SERTM2A0A1B0GWG4 89 aa1.7□□□□□ -2.14
ITGB1-214ENST00000488427 LRRN3E7EW58 273 aa1.7□□□□□ -2.14
ITGB1-214ENST00000488427 UPK2O00526 184 aa1.7□□□□□ -2.14
ITGB1-214ENST00000488427 GATCO43716 136 aaKnown RBP1.7□□□□□ -2.14
ITGB1-214ENST00000488427 ZNF73O43830 326 aaPredicted RBP1.7□□□□□ -2.14
ITGB1-214ENST00000488427 HLA-DRB1P01911 266 aa1.7□□□□□ -2.14
ITGB1-214ENST00000488427 REG1AP05451 166 aa1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms