RNA–Protein interactions for RNA: ENST00000480562.3

ABCF3-214, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 1 (best)

Gene ABCF3, Length 1,182 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-214ENST00000480562 KCNIP3Q9Y2W7 256 aa13.59□□□□□ -0.23
ABCF3-214ENST00000480562 FAT2Q9NYQ8 4349 aa13.58□□□□□ -0.23
ABCF3-214ENST00000480562 IGHV4-4A0A075B6R2 117 aa13.58□□□□□ -0.24
ABCF3-214ENST00000480562 ANKRD20A5PA0PJZ0 165 aa13.58□□□□□ -0.24
ABCF3-214ENST00000480562 CENPSQ8N2Z9 138 aa13.58□□□□□ -0.24
ABCF3-214ENST00000480562 RBKSQ9H477 322 aa13.58□□□□□ -0.24
ABCF3-214ENST00000480562 DNAH17Q9UFH2 4485 aa13.58□□□□□ -0.24
ABCF3-214ENST00000480562 H3BMM0 161 aa13.57□□□□□ -0.24
ABCF3-214ENST00000480562 GSTZ1O43708 216 aaPredicted RBP13.57□□□□□ -0.24
ABCF3-214ENST00000480562 AKR1C4P17516 323 aa13.57□□□□□ -0.24
ABCF3-214ENST00000480562 DEFB1P60022 68 aa13.57□□□□□ -0.24
ABCF3-214ENST00000480562 C12orf74Q32Q52 190 aa13.57□□□□□ -0.24
ABCF3-214ENST00000480562 LYZL2Q7Z4W2 148 aa13.57□□□□□ -0.24
ABCF3-214ENST00000480562 LGI3Q8N145 548 aa13.57□□□□□ -0.24
ABCF3-214ENST00000480562 DTD1Q8TEA8 209 aa13.57□□□□□ -0.24
ABCF3-214ENST00000480562 PBDC1Q9BVG4 233 aa13.57□□□□□ -0.24
ABCF3-214ENST00000480562 MCUBQ9NWR8 336 aa13.57□□□□□ -0.24
ABCF3-214ENST00000480562 HSPB7Q9UBY9 170 aa13.57□□□□□ -0.24
ABCF3-214ENST00000480562 CACFD1Q9UGQ2 172 aa13.57□□□□□ -0.24
ABCF3-214ENST00000480562 U3KQ87 197 aa13.57□□□□□ -0.24
ABCF3-214ENST00000480562 CCR6P51684 374 aa13.56□□□□□ -0.24
ABCF3-214ENST00000480562 SUPT4H1P63272 117 aaKnown RBP13.56□□□□□ -0.24
ABCF3-214ENST00000480562 KLF9Q13886 244 aaPredicted RBP13.56□□□□□ -0.24
ABCF3-214ENST00000480562 SMCO1Q147U7 214 aa13.56□□□□□ -0.24
ABCF3-214ENST00000480562 DYNC2LI1Q8TCX1 351 aa13.56□□□□□ -0.24
ABCF3-214ENST00000480562 RNF125Q96EQ8 232 aa13.56□□□□□ -0.24
ABCF3-214ENST00000480562 SEPSECSQ9HD40 501 aaKnown RBP13.56□□□□□ -0.24
ABCF3-214ENST00000480562 SCP2D1Q9UJQ7 156 aa13.56□□□□□ -0.24
ABCF3-214ENST00000480562 A0A0B4J2A0 478 aa13.55□□□□□ -0.24
ABCF3-214ENST00000480562 NUTF2P61970 127 aaKnown RBP13.55□□□□□ -0.24
ABCF3-214ENST00000480562 ZNF90Q03938 601 aa13.55□□□□□ -0.24
ABCF3-214ENST00000480562 GDF5OSQ5U4N7 250 aa13.55□□□□□ -0.24
ABCF3-214ENST00000480562 GSG1LQ6UXU4 331 aa13.55□□□□□ -0.24
ABCF3-214ENST00000480562 SCGB3A2Q96PL1 93 aa13.55□□□□□ -0.24
ABCF3-214ENST00000480562 RNF126Q9BV68 326 aa13.55□□□□□ -0.24
ABCF3-214ENST00000480562 SCRT1Q9BWW7 348 aa13.55□□□□□ -0.24
ABCF3-214ENST00000480562 C1QTNF4Q9BXJ3 329 aa13.55□□□□□ -0.24
ABCF3-214ENST00000480562 CCDC59Q9P031 241 aaKnown RBP13.55□□□□□ -0.24
ABCF3-214ENST00000480562 RABL2AQ9UBK7 228 aaPredicted RBP13.55□□□□□ -0.24
ABCF3-214ENST00000480562 SHPKQ9UHJ6 478 aa13.55□□□□□ -0.24
ABCF3-214ENST00000480562 RABL2BQ9UNT1 228 aa13.55□□□□□ -0.24
ABCF3-214ENST00000480562 DEFB131BA0A096LNP1 70 aa13.54□□□□□ -0.24
ABCF3-214ENST00000480562 ZFP92A6NM28 416 aa13.54□□□□□ -0.24
ABCF3-214ENST00000480562 IGKV3-20P01619 116 aa13.54□□□□□ -0.24
ABCF3-214ENST00000480562 HLA-DRB4P13762 266 aa13.54□□□□□ -0.24
ABCF3-214ENST00000480562 FXYD7P58549 80 aa13.54□□□□□ -0.24
ABCF3-214ENST00000480562 GAMTQ14353 236 aa13.54□□□□□ -0.24
ABCF3-214ENST00000480562 WDR12Q9GZL7 423 aaKnown RBP13.54□□□□□ -0.24
ABCF3-214ENST00000480562 HLA-DRB4X5D2U9 266 aa13.54□□□□□ -0.24
ABCF3-214ENST00000480562 IGKV1D-37A0A075B6S9 117 aa13.53□□□□□ -0.24
ABCF3-214ENST00000480562 NKX2-1P43699 371 aaPredicted RBP13.53□□□□□ -0.24
ABCF3-214ENST00000480562 OR1S1Q8NH92 325 aa13.53□□□□□ -0.24
ABCF3-214ENST00000480562 RAB2BQ8WUD1 216 aa13.53□□□□□ -0.24
ABCF3-214ENST00000480562 LINC00052Q96N35 136 aa13.53□□□□□ -0.24
ABCF3-214ENST00000480562 RSL24D1Q9UHA3 163 aaKnown RBP13.53□□□□□ -0.24
ABCF3-214ENST00000480562 GPX4P36969 197 aaPredicted RBP13.52□□□□□ -0.25
ABCF3-214ENST00000480562 LYZP61626 148 aa13.52□□□□□ -0.25
ABCF3-214ENST00000480562 OR8G2PQ6IF36 304 aa13.52□□□□□ -0.25
ABCF3-214ENST00000480562 SLC35E1Q96K37 410 aa13.52□□□□□ -0.25
ABCF3-214ENST00000480562 AMBPP02760 352 aa13.51□□□□□ -0.25
ABCF3-214ENST00000480562 ANXA3P12429 323 aa13.51□□□□□ -0.25
ABCF3-214ENST00000480562 TNFSF8P32971 234 aa13.51□□□□□ -0.25
ABCF3-214ENST00000480562 NUP62P37198 522 aaPredicted RBP13.51□□□□□ -0.25
ABCF3-214ENST00000480562 EMP1P54849 157 aa13.51□□□□□ -0.25
ABCF3-214ENST00000480562 OR2F1Q13607 317 aa13.51□□□□□ -0.25
ABCF3-214ENST00000480562 SOSTQ9BQB4 213 aa13.51□□□□□ -0.25
ABCF3-214ENST00000480562 KIAA1109Q2LD37 5005 aa13.51□□□□□ -0.25
ABCF3-214ENST00000480562 IGHV3OR16-12A0A075B7B8 117 aa13.5□□□□□ -0.25
ABCF3-214ENST00000480562 FABP12A6NFH5 140 aa13.5□□□□□ -0.25
ABCF3-214ENST00000480562 IAPPP10997 89 aa13.5□□□□□ -0.25
ABCF3-214ENST00000480562 ID1P41134 155 aa13.5□□□□□ -0.25
ABCF3-214ENST00000480562 TMBIM6P55061 237 aa13.5□□□□□ -0.25
ABCF3-214ENST00000480562 SRPXP78539 464 aa13.5□□□□□ -0.25
ABCF3-214ENST00000480562 ZNF705AQ6ZN79 300 aaPredicted RBP13.5□□□□□ -0.25
ABCF3-214ENST00000480562 TMED4Q7Z7H5 227 aa13.5□□□□□ -0.25
ABCF3-214ENST00000480562 SLIRPQ9GZT3 109 aaKnown RBP13.5□□□□□ -0.25
ABCF3-214ENST00000480562 SAV1Q9H4B6 383 aaPredicted RBP13.5□□□□□ -0.25
ABCF3-214ENST00000480562 PFDN2Q9UHV9 154 aa13.5□□□□□ -0.25
ABCF3-214ENST00000480562 DYNC1H1Q14204 4646 aaKnown RBP13.49□□□□□ -0.25
ABCF3-214ENST00000480562 ZNF705FA8MVS1 300 aaPredicted RBP13.49□□□□□ -0.25
ABCF3-214ENST00000480562 SOCS3O14543 225 aa13.49□□□□□ -0.25
ABCF3-214ENST00000480562 ZNF705DP0CH99 300 aaPredicted RBP13.49□□□□□ -0.25
ABCF3-214ENST00000480562 ZNF705BP0CI00 300 aaPredicted RBP13.49□□□□□ -0.25
ABCF3-214ENST00000480562 ATP5IP56385 69 aaPredicted RBP13.49□□□□□ -0.25
ABCF3-214ENST00000480562 FOXI2Q6ZQN5 318 aa13.49□□□□□ -0.25
ABCF3-214ENST00000480562 COQ8AQ8NI60 647 aa13.49□□□□□ -0.25
ABCF3-214ENST00000480562 PPP1R14BQ96C90 147 aa13.49□□□□□ -0.25
ABCF3-214ENST00000480562 PAIP2BQ9ULR5 123 aaKnown RBP13.49□□□□□ -0.25
ABCF3-214ENST00000480562 SNRPGP15A8MWD9 76 aa13.48□□□□□ -0.25
ABCF3-214ENST00000480562 PITX3O75364 302 aa13.48□□□□□ -0.25
ABCF3-214ENST00000480562 FABP1P07148 127 aa13.48□□□□□ -0.25
ABCF3-214ENST00000480562 PSMB3P49720 205 aa13.48□□□□□ -0.25
ABCF3-214ENST00000480562 OR4B1Q8NGF8 309 aa13.48□□□□□ -0.25
ABCF3-214ENST00000480562 NEU1Q99519 415 aa13.48□□□□□ -0.25
ABCF3-214ENST00000480562 BCL7BQ9BQE9 202 aa13.48□□□□□ -0.25
ABCF3-214ENST00000480562 NDUFAF3Q9BU61 184 aa13.48□□□□□ -0.25
ABCF3-214ENST00000480562 F6UB75 175 aa13.47□□□□□ -0.25
ABCF3-214ENST00000480562 SPART-AS1P0CW21 52 aa13.47□□□□□ -0.25
ABCF3-214ENST00000480562 RAB11AP62491 216 aa13.47□□□□□ -0.25
ABCF3-214ENST00000480562 C1orf194Q5T5A4 169 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 114.3 ms