RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 GUCA2BQ16661 112 aa8.16□□□□□ -1.1
ATG4B-219ENST00000479941 DEFB121Q5J5C9 76 aa8.16□□□□□ -1.1
ATG4B-219ENST00000479941 STX12Q86Y82 276 aa8.16□□□□□ -1.1
ATG4B-219ENST00000479941 TMEM61Q8N0U2 210 aa8.16□□□□□ -1.1
ATG4B-219ENST00000479941 PPP1R1CQ8WVI7 109 aa8.16□□□□□ -1.1
ATG4B-219ENST00000479941 NARS2Q96I59 477 aaKnown RBP8.16□□□□□ -1.1
ATG4B-219ENST00000479941 MED28Q9H204 178 aa8.16□□□□□ -1.1
ATG4B-219ENST00000479941 TMEM231Q9H6L2 316 aa8.16□□□□□ -1.1
ATG4B-219ENST00000479941 VSIRQ9H7M9 311 aa8.16□□□□□ -1.1
ATG4B-219ENST00000479941 NPVFQ9HCQ7 196 aa8.16□□□□□ -1.1
ATG4B-219ENST00000479941 LSM4Q9Y4Z0 139 aaKnown RBP8.16□□□□□ -1.1
ATG4B-219ENST00000479941 TSPAN4O14817 238 aa8.15□□□□□ -1.1
ATG4B-219ENST00000479941 HNRNPCP07910 306 aaKnown RBP eCLIP8.15□□□□□ -1.1
ATG4B-219ENST00000479941 S100A11P31949 105 aa8.15□□□□□ -1.1
ATG4B-219ENST00000479941 RRAS2P62070 204 aaPredicted RBP8.15□□□□□ -1.1
ATG4B-219ENST00000479941 ARL16Q0P5N6 197 aa8.15□□□□□ -1.1
ATG4B-219ENST00000479941 LRRC37A5PQ49AS3 106 aa8.15□□□□□ -1.1
ATG4B-219ENST00000479941 GTSCR1Q86UQ5 136 aa8.15□□□□□ -1.1
ATG4B-219ENST00000479941 TMEM252Q8N6L7 170 aa8.15□□□□□ -1.1
ATG4B-219ENST00000479941 RNF125Q96EQ8 232 aa8.15□□□□□ -1.1
ATG4B-219ENST00000479941 WDR89Q96FK6 387 aaPredicted RBP8.15□□□□□ -1.1
ATG4B-219ENST00000479941 RNF2Q99496 336 aa8.15□□□□□ -1.1
ATG4B-219ENST00000479941 SPAG8Q99932 426 aaPredicted RBP8.15□□□□□ -1.1
ATG4B-219ENST00000479941 SMAD5-AS1Q9Y6J3 95 aa8.15□□□□□ -1.1
ATG4B-219ENST00000479941 IGHV3OR16-13A0A075B7E8 117 aa8.14□□□□□ -1.11
ATG4B-219ENST00000479941 IGHV3-49A0A0A0MS15 119 aa8.14□□□□□ -1.11
ATG4B-219ENST00000479941 IGHV3-74A0A0B4J1X5 117 aa8.14□□□□□ -1.11
ATG4B-219ENST00000479941 H0YIZ8 118 aa8.14□□□□□ -1.11
ATG4B-219ENST00000479941 CST7O76096 145 aa8.14□□□□□ -1.11
ATG4B-219ENST00000479941 MPC2O95563 127 aa8.14□□□□□ -1.11
ATG4B-219ENST00000479941 APOHP02749 345 aaPredicted RBP8.14□□□□□ -1.11
ATG4B-219ENST00000479941 CXCL3P19876 107 aa8.14□□□□□ -1.11
ATG4B-219ENST00000479941 P2RY1P47900 373 aa8.14□□□□□ -1.11
ATG4B-219ENST00000479941 HBG1P69891 147 aa8.14□□□□□ -1.11
ATG4B-219ENST00000479941 HBG2P69892 147 aa8.14□□□□□ -1.11
ATG4B-219ENST00000479941 SLC38A11Q08AI6 406 aa8.14□□□□□ -1.11
ATG4B-219ENST00000479941 FCN2Q15485 313 aa8.14□□□□□ -1.11
ATG4B-219ENST00000479941 USF2Q15853 346 aaPredicted RBP8.14□□□□□ -1.11
ATG4B-219ENST00000479941 TEPPQ6URK8 271 aa8.14□□□□□ -1.11
ATG4B-219ENST00000479941 Q8N1Y9 231 aa8.14□□□□□ -1.11
ATG4B-219ENST00000479941 BPIFCQ8NFQ6 507 aa8.14□□□□□ -1.11
ATG4B-219ENST00000479941 ASB13Q8WXK3 278 aa8.14□□□□□ -1.11
ATG4B-219ENST00000479941 ST8SIA2Q92186 375 aa8.14□□□□□ -1.11
ATG4B-219ENST00000479941 GRAMD2BQ96HH9 432 aa8.14□□□□□ -1.11
ATG4B-219ENST00000479941 SLC25A31Q9H0C2 315 aa8.14□□□□□ -1.11
ATG4B-219ENST00000479941 PFDN2Q9UHV9 154 aa8.14□□□□□ -1.11
ATG4B-219ENST00000479941 RABAC1Q9UI14 185 aa8.14□□□□□ -1.11
ATG4B-219ENST00000479941 SELENOKQ9Y6D0 94 aa8.14□□□□□ -1.11
ATG4B-219ENST00000479941 U3KQE9 123 aa8.14□□□□□ -1.11
ATG4B-219ENST00000479941 IGSF23A1L1A6 192 aa8.13□□□□□ -1.11
ATG4B-219ENST00000479941 NUP62P37198 522 aaPredicted RBP8.13□□□□□ -1.11
ATG4B-219ENST00000479941 EIF2B2P49770 351 aaKnown RBP8.13□□□□□ -1.11
ATG4B-219ENST00000479941 CD81P60033 236 aa8.13□□□□□ -1.11
ATG4B-219ENST00000479941 SELENOTP62341 195 aa8.13□□□□□ -1.11
ATG4B-219ENST00000479941 PAFAH1B2P68402 229 aa8.13□□□□□ -1.11
ATG4B-219ENST00000479941 BAXQ07812 192 aa8.13□□□□□ -1.11
ATG4B-219ENST00000479941 OR2F1Q13607 317 aa8.13□□□□□ -1.11
ATG4B-219ENST00000479941 ATP6V1FQ16864 119 aa8.13□□□□□ -1.11
ATG4B-219ENST00000479941 FAM90A2PQ658T7 463 aa8.13□□□□□ -1.11
ATG4B-219ENST00000479941 TCF24Q7RTU0 167 aa8.13□□□□□ -1.11
ATG4B-219ENST00000479941 LILRB2Q8N423 598 aa8.13□□□□□ -1.11
ATG4B-219ENST00000479941 TMEM217Q8N7C4 229 aa8.13□□□□□ -1.11
ATG4B-219ENST00000479941 NEURL2Q9BR09 285 aa8.13□□□□□ -1.11
ATG4B-219ENST00000479941 PBDC1Q9BVG4 233 aa8.13□□□□□ -1.11
ATG4B-219ENST00000479941 OR5AC2Q9NZP5 309 aa8.13□□□□□ -1.11
ATG4B-219ENST00000479941 IGHV3-66A0A0C4DH42 116 aa8.12□□□□□ -1.11
ATG4B-219ENST00000479941 OR4C46A6NHA9 309 aa8.12□□□□□ -1.11
ATG4B-219ENST00000479941 BUB3O43684 328 aa8.12□□□□□ -1.11
ATG4B-219ENST00000479941 DFFBO76075 338 aa8.12□□□□□ -1.11
ATG4B-219ENST00000479941 S100A7P31151 101 aa8.12□□□□□ -1.11
ATG4B-219ENST00000479941 AP2S1P53680 142 aaPredicted RBP8.12□□□□□ -1.11
ATG4B-219ENST00000479941 LYZP61626 148 aa8.12□□□□□ -1.11
ATG4B-219ENST00000479941 VWC2Q2TAL6 325 aa8.12□□□□□ -1.11
ATG4B-219ENST00000479941 CYP2G1PQ6ZSU1 146 aa8.12□□□□□ -1.11
ATG4B-219ENST00000479941 OR11H7Q8NGC8 314 aa8.12□□□□□ -1.11
ATG4B-219ENST00000479941 RNF126Q9BV68 326 aa8.12□□□□□ -1.11
ATG4B-219ENST00000479941 UQCC1Q9NVA1 299 aa8.12□□□□□ -1.11
ATG4B-219ENST00000479941 SLC45A2Q9UMX9 530 aa8.12□□□□□ -1.11
ATG4B-219ENST00000479941 HUWE1Q7Z6Z7 4374 aaKnown RBP8.11□□□□□ -1.11
ATG4B-219ENST00000479941 HELTA6NFD8 242 aa8.11□□□□□ -1.11
ATG4B-219ENST00000479941 A8MZ25 164 aa8.11□□□□□ -1.11
ATG4B-219ENST00000479941 CD7P09564 240 aa8.11□□□□□ -1.11
ATG4B-219ENST00000479941 GIPP09681 153 aaPredicted RBP8.11□□□□□ -1.11
ATG4B-219ENST00000479941 GATA2P23769 480 aaPredicted RBP8.11□□□□□ -1.11
ATG4B-219ENST00000479941 EWSR1Q01844 656 aaKnown RBP eCLIP8.11□□□□□ -1.11
ATG4B-219ENST00000479941 FGL1Q08830 312 aa8.11□□□□□ -1.11
ATG4B-219ENST00000479941 RAB31Q13636 194 aa8.11□□□□□ -1.11
ATG4B-219ENST00000479941 C16orf54Q6UWD8 224 aa8.11□□□□□ -1.11
ATG4B-219ENST00000479941 TMEM182Q6ZP80 229 aaPredicted RBP8.11□□□□□ -1.11
ATG4B-219ENST00000479941 ZNF546Q86UE3 836 aa8.11□□□□□ -1.11
ATG4B-219ENST00000479941 THAP6Q8TBB0 222 aa8.11□□□□□ -1.11
ATG4B-219ENST00000479941 TMEM147Q9BVK8 224 aa8.11□□□□□ -1.11
ATG4B-219ENST00000479941 TRAV2A0A0B4J234 112 aa8.1□□□□□ -1.11
ATG4B-219ENST00000479941 OR11H12B2RN74 326 aa8.1□□□□□ -1.11
ATG4B-219ENST00000479941 AGPAT2O15120 278 aa8.1□□□□□ -1.11
ATG4B-219ENST00000479941 LINC00869P0C866 280 aa8.1□□□□□ -1.11
ATG4B-219ENST00000479941 IGHV4-30-4P0DP06 118 aa8.1□□□□□ -1.11
ATG4B-219ENST00000479941 LYL1P12980 280 aa8.1□□□□□ -1.11
ATG4B-219ENST00000479941 ORM2P19652 201 aa8.1□□□□□ -1.11
ATG4B-219ENST00000479941 CAMLGP49069 296 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 120.7 ms