RNA–Protein interactions for RNA: ENST00000479868.6

SEC13-216, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC13, Length 2,374 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-216ENST00000479868 FXYD3Q14802 87 aa10.32□□□□□ -0.76
SEC13-216ENST00000479868 PERPQ96FX8 193 aa10.32□□□□□ -0.76
SEC13-216ENST00000479868 LINC00479Q96M42 142 aa10.32□□□□□ -0.76
SEC13-216ENST00000479868 TRAV20A0A0B4J274 112 aa10.31□□□□□ -0.76
SEC13-216ENST00000479868 IGLV2-8P01709 118 aa10.31□□□□□ -0.76
SEC13-216ENST00000479868 ERVFC1-1P60608 527 aa10.31□□□□□ -0.76
SEC13-216ENST00000479868 RPL15P61313 204 aaKnown RBP10.31□□□□□ -0.76
SEC13-216ENST00000479868 C5orf64Q2M2E5 130 aa10.31□□□□□ -0.76
SEC13-216ENST00000479868 ZNF329Q86UD4 541 aa10.31□□□□□ -0.76
SEC13-216ENST00000479868 IGF2BP2-AS1Q96M15 143 aa10.31□□□□□ -0.76
SEC13-216ENST00000479868 SRSF8Q9BRL6 282 aaKnown RBP10.31□□□□□ -0.76
SEC13-216ENST00000479868 SIRPDQ9H106 197 aa10.31□□□□□ -0.76
SEC13-216ENST00000479868 NIT2Q9NQR4 276 aa10.31□□□□□ -0.76
SEC13-216ENST00000479868 PITPNC1Q9UKF7 332 aa10.31□□□□□ -0.76
SEC13-216ENST00000479868 HYPMO75409 117 aa10.31□□□□□ -0.76
SEC13-216ENST00000479868 PSG1P11464 419 aa10.31□□□□□ -0.76
SEC13-216ENST00000479868 S100A2P29034 98 aa10.31□□□□□ -0.76
SEC13-216ENST00000479868 LEMD1Q68G75 181 aa10.31□□□□□ -0.76
SEC13-216ENST00000479868 BPESC1Q9GZL8 116 aa10.31□□□□□ -0.76
SEC13-216ENST00000479868 IL36BQ9NZH7 164 aa10.31□□□□□ -0.76
SEC13-216ENST00000479868 V9GYV3 84 aa10.31□□□□□ -0.76
SEC13-216ENST00000479868 K7EIM0 57 aa10.3□□□□□ -0.76
SEC13-216ENST00000479868 PLP1P60201 277 aa10.3□□□□□ -0.76
SEC13-216ENST00000479868 TIGITQ495A1 244 aa10.3□□□□□ -0.76
SEC13-216ENST00000479868 RNASE7Q9H1E1 156 aaKnown RBP10.3□□□□□ -0.76
SEC13-216ENST00000479868 FABP4P15090 132 aa10.3□□□□□ -0.76
SEC13-216ENST00000479868 RANP62826 216 aaKnown RBP10.3□□□□□ -0.76
SEC13-216ENST00000479868 PYY3Q5JQD4 70 aa10.3□□□□□ -0.76
SEC13-216ENST00000479868 KLF17Q5JT82 389 aaPredicted RBP10.3□□□□□ -0.76
SEC13-216ENST00000479868 CCDC144NLQ6NUI1 221 aa10.3□□□□□ -0.76
SEC13-216ENST00000479868 NHLRC2Q8NBF2 726 aa10.3□□□□□ -0.76
SEC13-216ENST00000479868 OR10D4PQ8NGN7 298 aa10.3□□□□□ -0.76
SEC13-216ENST00000479868 BLNKQ8WV28 456 aa10.3□□□□□ -0.76
SEC13-216ENST00000479868 FLNCQ14315 2725 aa10.3□□□□□ -0.76
SEC13-216ENST00000479868 IGHV2-70DA0A0C4DH43 119 aa10.29□□□□□ -0.76
SEC13-216ENST00000479868 XKRY2A2RUG3 117 aa10.29□□□□□ -0.76
SEC13-216ENST00000479868 GCGP01275 180 aa10.29□□□□□ -0.76
SEC13-216ENST00000479868 IGKV1-17P01599 117 aa10.29□□□□□ -0.76
SEC13-216ENST00000479868 MYCNOSP40205 109 aa10.29□□□□□ -0.76
SEC13-216ENST00000479868 LYZP61626 148 aa10.29□□□□□ -0.76
SEC13-216ENST00000479868 NDPQ00604 133 aa10.29□□□□□ -0.76
SEC13-216ENST00000479868 C21orf62-AS1Q17RA5 79 aa10.29□□□□□ -0.76
SEC13-216ENST00000479868 TMEM183AQ8IXX5 376 aa10.29□□□□□ -0.76
SEC13-216ENST00000479868 STXBP6Q8NFX7 210 aa10.29□□□□□ -0.76
SEC13-216ENST00000479868 CDC42EP3Q9UKI2 254 aa10.29□□□□□ -0.76
SEC13-216ENST00000479868 TRAPPC1Q9Y5R8 145 aa10.29□□□□□ -0.76
SEC13-216ENST00000479868 TRAV34A0A0B4J273 112 aa10.29□□□□□ -0.76
SEC13-216ENST00000479868 NCBP2LA6PVI3 153 aaKnown RBP10.29□□□□□ -0.76
SEC13-216ENST00000479868 MGST1P10620 155 aaKnown RBP10.29□□□□□ -0.76
SEC13-216ENST00000479868 GP9P14770 177 aa10.29□□□□□ -0.76
SEC13-216ENST00000479868 LMO4P61968 165 aa10.29□□□□□ -0.76
SEC13-216ENST00000479868 GNG5P63218 68 aa10.29□□□□□ -0.76
SEC13-216ENST00000479868 CX3CL1P78423 397 aa10.29□□□□□ -0.76
SEC13-216ENST00000479868 MINOS1Q5TGZ0 78 aa10.29□□□□□ -0.76
SEC13-216ENST00000479868 ASPHD1Q5U4P2 390 aa10.29□□□□□ -0.76
SEC13-216ENST00000479868 Q8N6K4 173 aa10.29□□□□□ -0.76
SEC13-216ENST00000479868 BTF3L4Q96K17 158 aa10.29□□□□□ -0.76
SEC13-216ENST00000479868 RASL11BQ9BPW5 248 aa10.29□□□□□ -0.76
SEC13-216ENST00000479868 MINOS1-NBL1R4GNA1 71 aa10.29□□□□□ -0.76
SEC13-216ENST00000479868 ACACBO00763 2458 aa10.29□□□□□ -0.76
SEC13-216ENST00000479868 ZFHX3Q15911 3703 aa10.28□□□□□ -0.76
SEC13-216ENST00000479868 LINC00587B1AMM8 73 aa10.28□□□□□ -0.76
SEC13-216ENST00000479868 OVOL3O00110 214 aa10.28□□□□□ -0.76
SEC13-216ENST00000479868 PEX7O00628 323 aa10.28□□□□□ -0.76
SEC13-216ENST00000479868 TOX4O94842 621 aa10.28□□□□□ -0.76
SEC13-216ENST00000479868 RPEL1Q2QD12 228 aa10.28□□□□□ -0.76
SEC13-216ENST00000479868 TMEM68Q96MH6 324 aa10.28□□□□□ -0.76
SEC13-216ENST00000479868 HIST1H2BLQ99880 126 aa10.28□□□□□ -0.76
SEC13-216ENST00000479868 HIGD1AQ9Y241 93 aa10.28□□□□□ -0.76
SEC13-216ENST00000479868 OOSP1A8MZH6 123 aa10.28□□□□□ -0.76
SEC13-216ENST00000479868 H3BTX0 84 aa10.28□□□□□ -0.76
SEC13-216ENST00000479868 NBEAP1P0C6P0 100 aa10.28□□□□□ -0.76
SEC13-216ENST00000479868 CNN1P51911 297 aaKnown RBP10.28□□□□□ -0.76
SEC13-216ENST00000479868 COA6Q5JTJ3 125 aaKnown RBP10.28□□□□□ -0.76
SEC13-216ENST00000479868 ZNF562Q6V9R5 426 aa10.28□□□□□ -0.76
SEC13-216ENST00000479868 TBX15Q96SF7 602 aa10.28□□□□□ -0.76
SEC13-216ENST00000479868 S4R3C0 116 aa10.28□□□□□ -0.76
SEC13-216ENST00000479868 ISLRO14498 428 aa10.27□□□□□ -0.77
SEC13-216ENST00000479868 FRMD6-AS1P0C7T7 363 aa10.27□□□□□ -0.77
SEC13-216ENST00000479868 TAS2R60P59551 318 aa10.27□□□□□ -0.77
SEC13-216ENST00000479868 EBI3Q14213 229 aa10.27□□□□□ -0.77
SEC13-216ENST00000479868 ARPC1AQ92747 370 aa10.27□□□□□ -0.77
SEC13-216ENST00000479868 AJUBAQ96IF1 538 aa10.27□□□□□ -0.77
SEC13-216ENST00000479868 OSTCQ9NRP0 149 aa10.27□□□□□ -0.77
SEC13-216ENST00000479868 PGPA6NDG6 321 aa10.26□□□□□ -0.77
SEC13-216ENST00000479868 IGHV4-39P01824 125 aa10.26□□□□□ -0.77
SEC13-216ENST00000479868 RD3LP0DJH9 198 aa10.26□□□□□ -0.77
SEC13-216ENST00000479868 IBA57Q5T440 356 aaKnown RBP10.26□□□□□ -0.77
SEC13-216ENST00000479868 CDPF1Q6NVV7 123 aa10.26□□□□□ -0.77
SEC13-216ENST00000479868 OR8I2Q8N0Y5 310 aa10.26□□□□□ -0.77
SEC13-216ENST00000479868 FANCD2OSQ96PS1 177 aa10.26□□□□□ -0.77
SEC13-216ENST00000479868 SLC25A39Q9BZJ4 359 aaPredicted RBP10.26□□□□□ -0.77
SEC13-216ENST00000479868 ABCA2Q9BZC7 2435 aa10.26□□□□□ -0.77
SEC13-216ENST00000479868 TRAV9-1A0A075B6T8 112 aa10.26□□□□□ -0.77
SEC13-216ENST00000479868 SLC25A5P05141 298 aaKnown RBP10.26□□□□□ -0.77
SEC13-216ENST00000479868 HIST1H1BP16401 226 aaKnown RBP10.26□□□□□ -0.77
SEC13-216ENST00000479868 TMEM11P17152 192 aa10.26□□□□□ -0.77
SEC13-216ENST00000479868 CBLN1P23435 193 aa10.26□□□□□ -0.77
SEC13-216ENST00000479868 PDLIM4P50479 330 aa10.26□□□□□ -0.77
SEC13-216ENST00000479868 YPEL3P61236 119 aaPredicted RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms