RNA–Protein interactions for RNA: ENST00000479135.5

EWSR1-216, Transcript of EWS RNA binding protein 1, humanhuman

TSL 1 (best)

Gene EWSR1, Length 7,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-216ENST00000479135 ACP7Q6ZNF0 438 aa9.13□□□□□ -0.95
EWSR1-216ENST00000479135 OR9G1Q8NH87 305 aa9.13□□□□□ -0.95
EWSR1-216ENST00000479135 HIST1H2BLQ99880 126 aa9.13□□□□□ -0.95
EWSR1-216ENST00000479135 FAM110AQ9BQ89 295 aa9.13□□□□□ -0.95
EWSR1-216ENST00000479135 LOXL1Q08397 574 aaPredicted RBP9.13□□□□□ -0.95
EWSR1-216ENST00000479135 FAM53BQ14153 422 aa9.13□□□□□ -0.95
EWSR1-216ENST00000479135 IGKV1-5P01602 117 aa9.13□□□□□ -0.95
EWSR1-216ENST00000479135 ZC2HC1BQ5TFG8 222 aa9.13□□□□□ -0.95
EWSR1-216ENST00000479135 C5orf66Q9H5L9 145 aa9.13□□□□□ -0.95
EWSR1-216ENST00000479135 RALGAPA1Q6GYQ0 2036 aa9.13□□□□□ -0.95
EWSR1-216ENST00000479135 FAM236AA0A1B0GUQ0 79 aa9.13□□□□□ -0.95
EWSR1-216ENST00000479135 FAM236BA0A1B0GV22 79 aa9.13□□□□□ -0.95
EWSR1-216ENST00000479135 LIFP15018 202 aa9.12□□□□□ -0.95
EWSR1-216ENST00000479135 TMEM242Q9NWH2 141 aa9.12□□□□□ -0.95
EWSR1-216ENST00000479135 NANOS3P60323 173 aaKnown RBP9.12□□□□□ -0.95
EWSR1-216ENST00000479135 OCC1Q8TAD7 63 aa9.12□□□□□ -0.95
EWSR1-216ENST00000479135 HIST1H2BKO60814 126 aa9.12□□□□□ -0.95
EWSR1-216ENST00000479135 HIST1H2BJP06899 126 aa9.12□□□□□ -0.95
EWSR1-216ENST00000479135 HIST1H2BOP23527 126 aa9.12□□□□□ -0.95
EWSR1-216ENST00000479135 HIST1H2BBP33778 126 aa9.12□□□□□ -0.95
EWSR1-216ENST00000479135 HIST1H2BDP58876 126 aa9.12□□□□□ -0.95
EWSR1-216ENST00000479135 HIST1H2BCP62807 126 aa9.12□□□□□ -0.95
EWSR1-216ENST00000479135 HIST2H2BEQ16778 126 aa9.12□□□□□ -0.95
EWSR1-216ENST00000479135 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.12□□□□□ -0.95
EWSR1-216ENST00000479135 HIST1H2BHQ93079 126 aa9.12□□□□□ -0.95
EWSR1-216ENST00000479135 HIST1H2BNQ99877 126 aa9.12□□□□□ -0.95
EWSR1-216ENST00000479135 HIST1H2BMQ99879 126 aa9.12□□□□□ -0.95
EWSR1-216ENST00000479135 A0A1W2PPV9 198 aa9.12□□□□□ -0.95
EWSR1-216ENST00000479135 CDKN1AP38936 164 aa9.12□□□□□ -0.95
EWSR1-216ENST00000479135 GATA4P43694 442 aa9.12□□□□□ -0.95
EWSR1-216ENST00000479135 RASL10BQ96S79 203 aa9.12□□□□□ -0.95
EWSR1-216ENST00000479135 TTTY12Q9BZ98 90 aa9.12□□□□□ -0.95
EWSR1-216ENST00000479135 ZNF703Q9H7S9 590 aaPredicted RBP9.12□□□□□ -0.95
EWSR1-216ENST00000479135 SPEM1Q8N4L4 309 aa9.12□□□□□ -0.95
EWSR1-216ENST00000479135 LHX9Q9NQ69 397 aa9.12□□□□□ -0.95
EWSR1-216ENST00000479135 DKK1O94907 266 aa9.12□□□□□ -0.95
EWSR1-216ENST00000479135 NTN5Q8WTR8 489 aaPredicted RBP9.12□□□□□ -0.95
EWSR1-216ENST00000479135 KLF2Q9Y5W3 355 aaPredicted RBP9.12□□□□□ -0.95
EWSR1-216ENST00000479135 COL18A1P39060 1754 aa9.11□□□□□ -0.95
EWSR1-216ENST00000479135 C17orf98A8MV24 154 aa9.11□□□□□ -0.95
EWSR1-216ENST00000479135 F2Z2F3 143 aa9.11□□□□□ -0.95
EWSR1-216ENST00000479135 DUSP15Q9H1R2 295 aaPredicted RBP9.11□□□□□ -0.95
EWSR1-216ENST00000479135 TRAV26-2A0A0B4J265 109 aa9.11□□□□□ -0.95
EWSR1-216ENST00000479135 CXCL1P09341 107 aa9.11□□□□□ -0.95
EWSR1-216ENST00000479135 C4orf48Q5BLP8 95 aa9.11□□□□□ -0.95
EWSR1-216ENST00000479135 C9orf47Q6ZRZ4 202 aa9.11□□□□□ -0.95
EWSR1-216ENST00000479135 HLA-DQB1P01920 261 aa9.1□□□□□ -0.95
EWSR1-216ENST00000479135 AMBPP02760 352 aa9.1□□□□□ -0.95
EWSR1-216ENST00000479135 TMEM187Q14656 261 aa9.1□□□□□ -0.95
EWSR1-216ENST00000479135 COX7B2Q8TF08 81 aa9.1□□□□□ -0.95
EWSR1-216ENST00000479135 RP1P56715 2156 aa9.1□□□□□ -0.95
EWSR1-216ENST00000479135 IGKV2D-24A0A075B6R9 120 aa9.1□□□□□ -0.95
EWSR1-216ENST00000479135 RHODO00212 210 aa9.1□□□□□ -0.95
EWSR1-216ENST00000479135 BAALC-AS2P0C853 105 aa9.1□□□□□ -0.95
EWSR1-216ENST00000479135 SMIM8Q96KF7 97 aa9.1□□□□□ -0.95
EWSR1-216ENST00000479135 ADAMTSL3P82987 1691 aa9.1□□□□□ -0.95
EWSR1-216ENST00000479135 IGKV1-39P01597 117 aa9.1□□□□□ -0.95
EWSR1-216ENST00000479135 IGKV1D-39P04432 117 aa9.1□□□□□ -0.95
EWSR1-216ENST00000479135 LTBP3Q9NS15 1303 aa9.1□□□□□ -0.95
EWSR1-216ENST00000479135 LOC101059948A0A1B0GTJ6 334 aa9.1□□□□□ -0.95
EWSR1-216ENST00000479135 HLA-DRB4P13762 266 aa9.1□□□□□ -0.95
EWSR1-216ENST00000479135 RHOGP84095 191 aa9.1□□□□□ -0.95
EWSR1-216ENST00000479135 ORMDL1Q9P0S3 153 aa9.1□□□□□ -0.95
EWSR1-216ENST00000479135 HLA-DRB4X5D2U9 266 aa9.1□□□□□ -0.95
EWSR1-216ENST00000479135 LINC01465Q8N7H1 131 aa9.1□□□□□ -0.95
EWSR1-216ENST00000479135 ATG2BQ96BY7 2078 aa9.1□□□□□ -0.95
EWSR1-216ENST00000479135 TRAV23DV6A0A075B6W5 121 aa9.1□□□□□ -0.95
EWSR1-216ENST00000479135 NDUFB1O75438 58 aa9.1□□□□□ -0.95
EWSR1-216ENST00000479135 ASPHD1Q5U4P2 390 aa9.1□□□□□ -0.95
EWSR1-216ENST00000479135 ZNF492Q9P255 531 aa9.1□□□□□ -0.95
EWSR1-216ENST00000479135 AKAP11Q9UKA4 1901 aa9.09□□□□□ -0.95
EWSR1-216ENST00000479135 A6NED7 52 aa9.09□□□□□ -0.95
EWSR1-216ENST00000479135 KLK9Q9UKQ9 250 aa9.09□□□□□ -0.95
EWSR1-216ENST00000479135 COLQQ9Y215 455 aaPredicted RBP9.09□□□□□ -0.95
EWSR1-216ENST00000479135 FANCMQ8IYD8 2048 aa9.09□□□□□ -0.95
EWSR1-216ENST00000479135 WIPF3A6NGB9 483 aa9.09□□□□□ -0.95
EWSR1-216ENST00000479135 Q6ZQT7 251 aa9.09□□□□□ -0.95
EWSR1-216ENST00000479135 TRAV13-2A0A0B4J235 113 aa9.09□□□□□ -0.95
EWSR1-216ENST00000479135 ZNF329Q86UD4 541 aa9.09□□□□□ -0.95
EWSR1-216ENST00000479135 ELSPBP1Q96BH3 223 aa9.09□□□□□ -0.95
EWSR1-216ENST00000479135 MVB12AQ96EY5 273 aa9.09□□□□□ -0.95
EWSR1-216ENST00000479135 SLC25A28Q96A46 364 aa9.09□□□□□ -0.95
EWSR1-216ENST00000479135 PIKFYVEQ9Y2I7 2098 aa9.09□□□□□ -0.95
EWSR1-216ENST00000479135 IGLV3-9A0A075B6K5 115 aa9.09□□□□□ -0.96
EWSR1-216ENST00000479135 HOXB4P17483 251 aaPredicted RBP9.09□□□□□ -0.96
EWSR1-216ENST00000479135 LSM6P62312 80 aaKnown RBP9.09□□□□□ -0.96
EWSR1-216ENST00000479135 FHL5Q5TD97 284 aa9.09□□□□□ -0.96
EWSR1-216ENST00000479135 SIPA1L3O60292 1781 aaPredicted RBP9.08□□□□□ -0.96
EWSR1-216ENST00000479135 SPSB3Q6PJ21 355 aa9.08□□□□□ -0.96
EWSR1-216ENST00000479135 MYEOVQ96EZ4 313 aa9.08□□□□□ -0.96
EWSR1-216ENST00000479135 CYTL1Q9NRR1 136 aa9.08□□□□□ -0.96
EWSR1-216ENST00000479135 ESPL1Q14674 2120 aa9.08□□□□□ -0.96
EWSR1-216ENST00000479135 TRBV19A0A075B6N1 114 aa9.08□□□□□ -0.96
EWSR1-216ENST00000479135 C15orf61A6NNL5 157 aa9.08□□□□□ -0.96
EWSR1-216ENST00000479135 NCR3O14931 201 aa9.08□□□□□ -0.96
EWSR1-216ENST00000479135 SH2D1AO60880 128 aa9.08□□□□□ -0.96
EWSR1-216ENST00000479135 TP53TG1Q9Y2A0 90 aa9.08□□□□□ -0.96
EWSR1-216ENST00000479135 DUSP14O95147 198 aaKnown RBP9.08□□□□□ -0.96
EWSR1-216ENST00000479135 XCL1P47992 114 aa9.08□□□□□ -0.96
EWSR1-216ENST00000479135 PAX9P55771 341 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms