RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 SSSCA1O60232 199 aa11.3□□□□□ -0.6
VARS-223ENST00000474643 PVALBP20472 110 aaPredicted RBP11.3□□□□□ -0.6
VARS-223ENST00000474643 OR10J1P30954 320 aa11.3□□□□□ -0.6
VARS-223ENST00000474643 BMI1P35226 326 aa11.3□□□□□ -0.6
VARS-223ENST00000474643 POLR2GP62487 172 aaKnown RBP eCLIP11.3□□□□□ -0.6
VARS-223ENST00000474643 TIGITQ495A1 244 aa11.3□□□□□ -0.6
VARS-223ENST00000474643 PRSS54Q6PEW0 395 aa11.3□□□□□ -0.6
VARS-223ENST00000474643 TOMM20LQ6UXN7 152 aa11.3□□□□□ -0.6
VARS-223ENST00000474643 OR1S2Q8NGQ3 325 aa11.3□□□□□ -0.6
VARS-223ENST00000474643 NPIPB3Q92617 1050 aa11.3□□□□□ -0.6
VARS-223ENST00000474643 STRAPQ9Y3F4 350 aaKnown RBP11.3□□□□□ -0.6
VARS-223ENST00000474643 LYSTQ99698 3801 aa11.3□□□□□ -0.6
VARS-223ENST00000474643 IGHV3-49A0A0A0MS15 119 aa11.29□□□□□ -0.6
VARS-223ENST00000474643 TSC22D2O75157 780 aa11.29□□□□□ -0.6
VARS-223ENST00000474643 DEDDO75618 318 aa11.29□□□□□ -0.6
VARS-223ENST00000474643 C8orf88P0DMB2 117 aa11.29□□□□□ -0.6
VARS-223ENST00000474643 TMEM116Q8NCL8 245 aa11.29□□□□□ -0.6
VARS-223ENST00000474643 PPP1R1CQ8WVI7 109 aa11.29□□□□□ -0.6
VARS-223ENST00000474643 NARS2Q96I59 477 aaKnown RBP11.29□□□□□ -0.6
VARS-223ENST00000474643 PSENENQ9NZ42 101 aa11.29□□□□□ -0.6
VARS-223ENST00000474643 IGHV3OR16-13A0A075B7E8 117 aa11.28□□□□□ -0.6
VARS-223ENST00000474643 IGHV3-74A0A0B4J1X5 117 aa11.28□□□□□ -0.6
VARS-223ENST00000474643 IGHV7-4-1A0A0J9YVY3 117 aa11.28□□□□□ -0.6
VARS-223ENST00000474643 CXorf65A6NEN9 183 aa11.28□□□□□ -0.6
VARS-223ENST00000474643 ZFP92A6NM28 416 aa11.28□□□□□ -0.6
VARS-223ENST00000474643 K7EPK0 472 aa11.28□□□□□ -0.6
VARS-223ENST00000474643 TSPAN4O14817 238 aa11.28□□□□□ -0.6
VARS-223ENST00000474643 SIX6O95475 246 aa11.28□□□□□ -0.6
VARS-223ENST00000474643 GPX4P36969 197 aaPredicted RBP11.28□□□□□ -0.6
VARS-223ENST00000474643 RAB32Q13637 225 aa11.28□□□□□ -0.6
VARS-223ENST00000474643 STPG3Q8N7X2 389 aa11.28□□□□□ -0.6
VARS-223ENST00000474643 Q8WTZ3 238 aa11.28□□□□□ -0.6
VARS-223ENST00000474643 RHPN1-AS1Q9BWJ2 59 aa11.28□□□□□ -0.6
VARS-223ENST00000474643 C11orf1Q9H5F2 150 aa11.28□□□□□ -0.6
VARS-223ENST00000474643 SMPXQ9UHP9 88 aa11.28□□□□□ -0.6
VARS-223ENST00000474643 RCL1Q9Y2P8 373 aaKnown RBP11.28□□□□□ -0.6
VARS-223ENST00000474643 IGKV3-7A0A075B6H7 116 aa11.27□□□□□ -0.61
VARS-223ENST00000474643 E5RGE8 158 aa11.27□□□□□ -0.61
VARS-223ENST00000474643 L7N2F9 121 aa11.27□□□□□ -0.61
VARS-223ENST00000474643 MPC2O95563 127 aa11.27□□□□□ -0.61
VARS-223ENST00000474643 IGLC1P0CG04 106 aa11.27□□□□□ -0.61
VARS-223ENST00000474643 NPPCP23582 126 aa11.27□□□□□ -0.61
VARS-223ENST00000474643 TFPI2P48307 235 aa11.27□□□□□ -0.61
VARS-223ENST00000474643 BCAP31P51572 246 aa11.27□□□□□ -0.61
VARS-223ENST00000474643 VAMP2P63027 116 aa11.27□□□□□ -0.61
VARS-223ENST00000474643 PMS2P11Q13670 270 aa11.27□□□□□ -0.61
VARS-223ENST00000474643 METTL26Q96S19 204 aa11.27□□□□□ -0.61
VARS-223ENST00000474643 LSM5Q9Y4Y9 91 aaKnown RBP11.27□□□□□ -0.61
VARS-223ENST00000474643 STARD9Q9P2P6 4700 aa11.26□□□□□ -0.61
VARS-223ENST00000474643 CHEK1O14757 476 aa11.26□□□□□ -0.61
VARS-223ENST00000474643 IGKV1-17P01599 117 aa11.26□□□□□ -0.61
VARS-223ENST00000474643 FABP1P07148 127 aa11.26□□□□□ -0.61
VARS-223ENST00000474643 RD3LP0DJH9 198 aa11.26□□□□□ -0.61
VARS-223ENST00000474643 RPL35AP18077 110 aaKnown RBP11.26□□□□□ -0.61
VARS-223ENST00000474643 P2RY1P47900 373 aa11.26□□□□□ -0.61
VARS-223ENST00000474643 PAX9P55771 341 aa11.26□□□□□ -0.61
VARS-223ENST00000474643 YPEL3P61236 119 aaPredicted RBP11.26□□□□□ -0.61
VARS-223ENST00000474643 PAFAH1B2P68402 229 aa11.26□□□□□ -0.61
VARS-223ENST00000474643 GAMTQ14353 236 aa11.26□□□□□ -0.61
VARS-223ENST00000474643 DEFB135Q30KP9 77 aa11.26□□□□□ -0.61
VARS-223ENST00000474643 OR8G2PQ6IF36 304 aa11.26□□□□□ -0.61
VARS-223ENST00000474643 TMEM231Q9H6L2 316 aa11.26□□□□□ -0.61
VARS-223ENST00000474643 ZFAND3Q9H8U3 227 aa11.26□□□□□ -0.61
VARS-223ENST00000474643 IGHV3-66A0A0C4DH42 116 aa11.25□□□□□ -0.61
VARS-223ENST00000474643 A0A1W2PS18 150 aa11.25□□□□□ -0.61
VARS-223ENST00000474643 SMCO3A2RU48 225 aa11.25□□□□□ -0.61
VARS-223ENST00000474643 UBE2CO00762 179 aa11.25□□□□□ -0.61
VARS-223ENST00000474643 SPRY2O43597 315 aa11.25□□□□□ -0.61
VARS-223ENST00000474643 S100A10P60903 97 aa11.25□□□□□ -0.61
VARS-223ENST00000474643 RPL11P62913 178 aaKnown RBP11.25□□□□□ -0.61
VARS-223ENST00000474643 AKR1C1Q04828 323 aa11.25□□□□□ -0.61
VARS-223ENST00000474643 TMEM14EPQ6UXP3 125 aa11.25□□□□□ -0.61
VARS-223ENST00000474643 THAP6Q8TBB0 222 aa11.25□□□□□ -0.61
VARS-223ENST00000474643 RNF2Q99496 336 aa11.25□□□□□ -0.61
VARS-223ENST00000474643 OVOL2Q9BRP0 275 aa11.25□□□□□ -0.61
VARS-223ENST00000474643 LYRM2Q9NU23 88 aaPredicted RBP11.25□□□□□ -0.61
VARS-223ENST00000474643 FNDC10F2Z333 226 aa11.24□□□□□ -0.61
VARS-223ENST00000474643 TOMM40O96008 361 aa11.24□□□□□ -0.61
VARS-223ENST00000474643 IL4P05112 153 aa11.24□□□□□ -0.61
VARS-223ENST00000474643 CMC4P56277 68 aaPredicted RBP11.24□□□□□ -0.61
VARS-223ENST00000474643 Q6ZWC4 215 aa11.24□□□□□ -0.61
VARS-223ENST00000474643 TCTE3Q8IZS6 198 aa11.24□□□□□ -0.61
VARS-223ENST00000474643 TMEM217Q8N7C4 229 aa11.24□□□□□ -0.61
VARS-223ENST00000474643 OR2T35Q8NGX2 323 aa11.24□□□□□ -0.61
VARS-223ENST00000474643 ST8SIA2Q92186 375 aa11.24□□□□□ -0.61
VARS-223ENST00000474643 GRAMD2BQ96HH9 432 aa11.24□□□□□ -0.61
VARS-223ENST00000474643 ZNF414Q96IQ9 312 aa11.24□□□□□ -0.61
VARS-223ENST00000474643 RNF126Q9BV68 326 aa11.24□□□□□ -0.61
VARS-223ENST00000474643 GGACTQ9BVM4 153 aa11.24□□□□□ -0.61
VARS-223ENST00000474643 SLC25A31Q9H0C2 315 aa11.24□□□□□ -0.61
VARS-223ENST00000474643 KIR2DL5BA0A0G2JN68 375 aa11.23□□□□□ -0.61
VARS-223ENST00000474643 KIR2DL5BA0A0G2JPC4 375 aa11.23□□□□□ -0.61
VARS-223ENST00000474643 A0A0J9YWU9 116 aa11.23□□□□□ -0.61
VARS-223ENST00000474643 DNASE2O00115 360 aaPredicted RBP11.23□□□□□ -0.61
VARS-223ENST00000474643 METTL15P1P0C7V9 234 aa11.23□□□□□ -0.61
VARS-223ENST00000474643 BAXQ07812 192 aa11.23□□□□□ -0.61
VARS-223ENST00000474643 TCF24Q7RTU0 167 aa11.23□□□□□ -0.61
VARS-223ENST00000474643 KIR2DL5AQ8N109 375 aa11.23□□□□□ -0.61
VARS-223ENST00000474643 KIR2DL5BQ8NHK3 375 aa11.23□□□□□ -0.61
VARS-223ENST00000474643 PBDC1Q9BVG4 233 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms