RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 DAD1P61803 113 aa3.6□□□□□ -1.83
SNRNP40-204ENST00000474025 MXD1Q05195 221 aa3.6□□□□□ -1.83
SNRNP40-204ENST00000474025 USF2Q15853 346 aaPredicted RBP3.6□□□□□ -1.83
SNRNP40-204ENST00000474025 BSXQ3C1V8 233 aa3.6□□□□□ -1.83
SNRNP40-204ENST00000474025 LCE5AQ5TCM9 118 aa3.6□□□□□ -1.83
SNRNP40-204ENST00000474025 SERTAD4-AS1Q5TG53 156 aa3.6□□□□□ -1.83
SNRNP40-204ENST00000474025 SIGLEC15Q6ZMC9 328 aa3.6□□□□□ -1.83
SNRNP40-204ENST00000474025 TBC1D26Q86UD7 250 aa3.6□□□□□ -1.83
SNRNP40-204ENST00000474025 C1orf158Q8N1D5 194 aa3.6□□□□□ -1.83
SNRNP40-204ENST00000474025 SLC35G3Q8N808 338 aa3.6□□□□□ -1.83
SNRNP40-204ENST00000474025 SYT8Q8NBV8 401 aa3.6□□□□□ -1.83
SNRNP40-204ENST00000474025 OR5H2Q8NGV7 314 aa3.6□□□□□ -1.83
SNRNP40-204ENST00000474025 OR6F1Q8NGZ6 308 aa3.6□□□□□ -1.83
SNRNP40-204ENST00000474025 ATG101Q9BSB4 218 aa3.6□□□□□ -1.83
SNRNP40-204ENST00000474025 DIABLOQ9NR28 239 aa3.6□□□□□ -1.83
SNRNP40-204ENST00000474025 PTTG2Q9NZH5 202 aa3.6□□□□□ -1.83
SNRNP40-204ENST00000474025 BLOC1S6Q9UL45 172 aa3.6□□□□□ -1.83
SNRNP40-204ENST00000474025 RABL2BQ9UNT1 228 aa3.6□□□□□ -1.83
SNRNP40-204ENST00000474025 YTHDF2Q9Y5A9 579 aaKnown RBP3.6□□□□□ -1.83
SNRNP40-204ENST00000474025 TRAV30A0A087WSZ9 112 aa3.59□□□□□ -1.83
SNRNP40-204ENST00000474025 BUB3O43684 328 aa3.59□□□□□ -1.83
SNRNP40-204ENST00000474025 GSTZ1O43708 216 aaPredicted RBP3.59□□□□□ -1.83
SNRNP40-204ENST00000474025 HBE1P02100 147 aa3.59□□□□□ -1.83
SNRNP40-204ENST00000474025 IL4P05112 153 aa3.59□□□□□ -1.83
SNRNP40-204ENST00000474025 PSMB9P28065 219 aa3.59□□□□□ -1.83
SNRNP40-204ENST00000474025 S100GP29377 79 aa3.59□□□□□ -1.83
SNRNP40-204ENST00000474025 ALDH3B2P48448 385 aa3.59□□□□□ -1.83
SNRNP40-204ENST00000474025 HOXA1P49639 335 aaPredicted RBP3.59□□□□□ -1.83
SNRNP40-204ENST00000474025 RND2P52198 227 aa3.59□□□□□ -1.83
SNRNP40-204ENST00000474025 SUB1P53999 127 aaKnown RBP eCLIP3.59□□□□□ -1.83
SNRNP40-204ENST00000474025 TAS2R20P59543 309 aa3.59□□□□□ -1.83
SNRNP40-204ENST00000474025 YPEL3P61236 119 aaPredicted RBP3.59□□□□□ -1.83
SNRNP40-204ENST00000474025 DHODHQ02127 395 aa3.59□□□□□ -1.83
SNRNP40-204ENST00000474025 IDNKQ5T6J7 187 aa3.59□□□□□ -1.83
SNRNP40-204ENST00000474025 PRSS54Q6PEW0 395 aa3.59□□□□□ -1.83
SNRNP40-204ENST00000474025 FOXI2Q6ZQN5 318 aa3.59□□□□□ -1.83
SNRNP40-204ENST00000474025 OR1S2Q8NGQ3 325 aa3.59□□□□□ -1.83
SNRNP40-204ENST00000474025 KRTAP1-5Q9BYS1 174 aa3.59□□□□□ -1.83
SNRNP40-204ENST00000474025 SLC35B3Q9H1N7 401 aa3.59□□□□□ -1.83
SNRNP40-204ENST00000474025 SAV1Q9H4B6 383 aaPredicted RBP3.59□□□□□ -1.83
SNRNP40-204ENST00000474025 SSR3Q9UNL2 185 aa3.59□□□□□ -1.83
SNRNP40-204ENST00000474025 GOLT1BQ9Y3E0 138 aa3.59□□□□□ -1.83
SNRNP40-204ENST00000474025 PKHD1L1Q86WI1 4243 aa3.58□□□□□ -1.84
SNRNP40-204ENST00000474025 A0A0G2JRQ6 117 aa3.58□□□□□ -1.84
SNRNP40-204ENST00000474025 RPS10-NUDT3A0A1W2PQS6 291 aa3.58□□□□□ -1.84
SNRNP40-204ENST00000474025 PGPEP1LA6NFU8 196 aa3.58□□□□□ -1.84
SNRNP40-204ENST00000474025 SOCS3O14543 225 aa3.58□□□□□ -1.84
SNRNP40-204ENST00000474025 TMEM127O75204 238 aa3.58□□□□□ -1.84
SNRNP40-204ENST00000474025 NXPH3O95157 252 aa3.58□□□□□ -1.84
SNRNP40-204ENST00000474025 SLC25A4P12235 298 aa3.58□□□□□ -1.84
SNRNP40-204ENST00000474025 HLA-DMAP28067 261 aa3.58□□□□□ -1.84
SNRNP40-204ENST00000474025 OR10J1P30954 320 aa3.58□□□□□ -1.84
SNRNP40-204ENST00000474025 ETV6P41212 452 aa3.58□□□□□ -1.84
SNRNP40-204ENST00000474025 HSPA13P48723 471 aa3.58□□□□□ -1.84
SNRNP40-204ENST00000474025 PSMB3P49720 205 aa3.58□□□□□ -1.84
SNRNP40-204ENST00000474025 RORCP51449 518 aa3.58□□□□□ -1.84
SNRNP40-204ENST00000474025 AKR1C2P52895 323 aa3.58□□□□□ -1.84
SNRNP40-204ENST00000474025 PAX9P55771 341 aa3.58□□□□□ -1.84
SNRNP40-204ENST00000474025 UCP3P55916 312 aa3.58□□□□□ -1.84
SNRNP40-204ENST00000474025 GABARAPL2P60520 117 aa3.58□□□□□ -1.84
SNRNP40-204ENST00000474025 RND3P61587 244 aa3.58□□□□□ -1.84
SNRNP40-204ENST00000474025 ZNF79Q15937 498 aa3.58□□□□□ -1.84
SNRNP40-204ENST00000474025 RRN3P1Q2M238 152 aa3.58□□□□□ -1.84
SNRNP40-204ENST00000474025 TMEM69Q5SWH9 247 aa3.58□□□□□ -1.84
SNRNP40-204ENST00000474025 LPCAT3Q6P1A2 487 aa3.58□□□□□ -1.84
SNRNP40-204ENST00000474025 GSG1LQ6UXU4 331 aa3.58□□□□□ -1.84
SNRNP40-204ENST00000474025 SPARTQ8N0X7 666 aa3.58□□□□□ -1.84
SNRNP40-204ENST00000474025 OR4B1Q8NGF8 309 aa3.58□□□□□ -1.84
SNRNP40-204ENST00000474025 Q8WTZ3 238 aa3.58□□□□□ -1.84
SNRNP40-204ENST00000474025 FRZBQ92765 325 aa3.58□□□□□ -1.84
SNRNP40-204ENST00000474025 CNBD2Q96M20 576 aa3.58□□□□□ -1.84
SNRNP40-204ENST00000474025 LINC00052Q96N35 136 aa3.58□□□□□ -1.84
SNRNP40-204ENST00000474025 C18orf15Q96N68 181 aa3.58□□□□□ -1.84
SNRNP40-204ENST00000474025 TP53RKQ96S44 253 aa3.58□□□□□ -1.84
SNRNP40-204ENST00000474025 PDCD10Q9BUL8 212 aa3.58□□□□□ -1.84
SNRNP40-204ENST00000474025 SCPEP1Q9HB40 452 aa3.58□□□□□ -1.84
SNRNP40-204ENST00000474025 LINC00588Q9Y4M8 146 aa3.58□□□□□ -1.84
SNRNP40-204ENST00000474025 A0A0J9YX75 114 aa3.57□□□□□ -1.84
SNRNP40-204ENST00000474025 LOC100506127A0A0U1RQW1 187 aa3.57□□□□□ -1.84
SNRNP40-204ENST00000474025 LYRM9A8MSI8 78 aa3.57□□□□□ -1.84
SNRNP40-204ENST00000474025 A8MTW9 85 aa3.57□□□□□ -1.84
SNRNP40-204ENST00000474025 F6UB75 175 aa3.57□□□□□ -1.84
SNRNP40-204ENST00000474025 B3GALNT1O75752 331 aa3.57□□□□□ -1.84
SNRNP40-204ENST00000474025 NUDT3O95989 172 aa3.57□□□□□ -1.84
SNRNP40-204ENST00000474025 TOMM40O96008 361 aa3.57□□□□□ -1.84
SNRNP40-204ENST00000474025 PRM2P04554 102 aa3.57□□□□□ -1.84
SNRNP40-204ENST00000474025 RD3LP0DJH9 198 aa3.57□□□□□ -1.84
SNRNP40-204ENST00000474025 PSG1P11464 419 aa3.57□□□□□ -1.84
SNRNP40-204ENST00000474025 PI3P19957 117 aa3.57□□□□□ -1.84
SNRNP40-204ENST00000474025 BTF3P20290 206 aaKnown RBP3.57□□□□□ -1.84
SNRNP40-204ENST00000474025 PRSS3P35030 304 aa3.57□□□□□ -1.84
SNRNP40-204ENST00000474025 HTR2BP41595 481 aa3.57□□□□□ -1.84
SNRNP40-204ENST00000474025 CCL18P55774 89 aa3.57□□□□□ -1.84
SNRNP40-204ENST00000474025 SPCS3P61009 180 aa3.57□□□□□ -1.84
SNRNP40-204ENST00000474025 TSPAN5P62079 268 aa3.57□□□□□ -1.84
SNRNP40-204ENST00000474025 VAMP2P63027 116 aa3.57□□□□□ -1.84
SNRNP40-204ENST00000474025 PSG9Q00887 426 aa3.57□□□□□ -1.84
SNRNP40-204ENST00000474025 AARDQ4LEZ3 155 aa3.57□□□□□ -1.84
SNRNP40-204ENST00000474025 TTC32Q5I0X7 151 aa3.57□□□□□ -1.84
SNRNP40-204ENST00000474025 UBE2NLQ5JXB2 153 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms