RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 TMEM86BQ8N661 226 aa7.33□□□□□ -1.24
VPS52-216ENST00000471309 ZNF502Q8TBZ5 544 aa7.33□□□□□ -1.24
VPS52-216ENST00000471309 RXFP4Q8TDU9 374 aa7.33□□□□□ -1.24
VPS52-216ENST00000471309 ATP6V0BQ99437 205 aa7.33□□□□□ -1.24
VPS52-216ENST00000471309 SLC35B3Q9H1N7 401 aa7.33□□□□□ -1.24
VPS52-216ENST00000471309 TMPRSS5Q9H3S3 457 aa7.33□□□□□ -1.24
VPS52-216ENST00000471309 GAR1Q9NY12 217 aaKnown RBP7.33□□□□□ -1.24
VPS52-216ENST00000471309 DOK5Q9P104 306 aa7.33□□□□□ -1.24
VPS52-216ENST00000471309 ARL2-SNX15V9GYD0 113 aa7.33□□□□□ -1.24
VPS52-216ENST00000471309 PDZD2O15018 2839 aa7.33□□□□□ -1.24
VPS52-216ENST00000471309 HYPMO75409 117 aa7.32□□□□□ -1.24
VPS52-216ENST00000471309 OR2C1O95371 312 aa7.32□□□□□ -1.24
VPS52-216ENST00000471309 APOC3P02656 99 aa7.32□□□□□ -1.24
VPS52-216ENST00000471309 RD3LP0DJH9 198 aa7.32□□□□□ -1.24
VPS52-216ENST00000471309 HNF1AP20823 631 aa7.32□□□□□ -1.24
VPS52-216ENST00000471309 PPIFP30405 207 aaKnown RBP7.32□□□□□ -1.24
VPS52-216ENST00000471309 DEFA5Q01523 94 aa7.32□□□□□ -1.24
VPS52-216ENST00000471309 CFHR3Q02985 330 aa7.32□□□□□ -1.24
VPS52-216ENST00000471309 PATE2Q6UY27 113 aa7.32□□□□□ -1.24
VPS52-216ENST00000471309 SVBPQ8N300 66 aa7.32□□□□□ -1.24
VPS52-216ENST00000471309 OR51G1Q8NGK1 321 aa7.32□□□□□ -1.24
VPS52-216ENST00000471309 OR1B1Q8NGR6 318 aa7.32□□□□□ -1.24
VPS52-216ENST00000471309 EEF1AKMT3Q96AZ1 226 aa7.32□□□□□ -1.24
VPS52-216ENST00000471309 TXNDC17Q9BRA2 123 aa7.32□□□□□ -1.24
VPS52-216ENST00000471309 SLC25A2Q9BXI2 301 aa7.32□□□□□ -1.24
VPS52-216ENST00000471309 NPFFR1Q9GZQ6 430 aa7.32□□□□□ -1.24
VPS52-216ENST00000471309 TMEM167BQ9NRX6 74 aa7.32□□□□□ -1.24
VPS52-216ENST00000471309 ZNF355PQ9NSJ1 428 aa7.32□□□□□ -1.24
VPS52-216ENST00000471309 TMEM160Q9NX00 188 aa7.32□□□□□ -1.24
VPS52-216ENST00000471309 TRBV7-1A0A0A6YYK4 115 aa7.31□□□□□ -1.24
VPS52-216ENST00000471309 WI2-2373I1.2A0A1W2PRP0 233 aa7.31□□□□□ -1.24
VPS52-216ENST00000471309 TMEM250H0YL14 139 aa7.31□□□□□ -1.24
VPS52-216ENST00000471309 OR7C2O60412 319 aa7.31□□□□□ -1.24
VPS52-216ENST00000471309 PAGE4O60829 102 aa7.31□□□□□ -1.24
VPS52-216ENST00000471309 IGLV1-40P01703 118 aa7.31□□□□□ -1.24
VPS52-216ENST00000471309 ORM2P19652 201 aa7.31□□□□□ -1.24
VPS52-216ENST00000471309 SRP14P37108 136 aaKnown RBP7.31□□□□□ -1.24
VPS52-216ENST00000471309 CD81P60033 236 aa7.31□□□□□ -1.24
VPS52-216ENST00000471309 LYZP61626 148 aa7.31□□□□□ -1.24
VPS52-216ENST00000471309 MORN5Q5VZ52 161 aa7.31□□□□□ -1.24
VPS52-216ENST00000471309 Q6ZS46 218 aa7.31□□□□□ -1.24
VPS52-216ENST00000471309 IL17RELQ6ZVW7 336 aa7.31□□□□□ -1.24
VPS52-216ENST00000471309 LINC00305Q7Z4B0 112 aa7.31□□□□□ -1.24
VPS52-216ENST00000471309 SIGLECL1Q8N7X8 197 aa7.31□□□□□ -1.24
VPS52-216ENST00000471309 CYB561D1Q8N8Q1 229 aa7.31□□□□□ -1.24
VPS52-216ENST00000471309 STXBP6Q8NFX7 210 aa7.31□□□□□ -1.24
VPS52-216ENST00000471309 OR5AU1Q8NGC0 362 aa7.31□□□□□ -1.24
VPS52-216ENST00000471309 SUN5Q8TC36 379 aa7.31□□□□□ -1.24
VPS52-216ENST00000471309 Q8WTZ3 238 aa7.31□□□□□ -1.24
VPS52-216ENST00000471309 RNF125Q96EQ8 232 aa7.31□□□□□ -1.24
VPS52-216ENST00000471309 ZNF503Q96F45 646 aa7.31□□□□□ -1.24
VPS52-216ENST00000471309 FAM167A-AS1Q96KT0 104 aa7.31□□□□□ -1.24
VPS52-216ENST00000471309 CCDC140Q96MF4 163 aa7.31□□□□□ -1.24
VPS52-216ENST00000471309 NOL4LQ96MY1 436 aaPredicted RBP7.31□□□□□ -1.24
VPS52-216ENST00000471309 UHRF2Q96PU4 802 aa7.31□□□□□ -1.24
VPS52-216ENST00000471309 YAE1D1Q9NRH1 226 aa7.31□□□□□ -1.24
VPS52-216ENST00000471309 HIGD1AQ9Y241 93 aa7.31□□□□□ -1.24
VPS52-216ENST00000471309 S4R3C0 116 aa7.31□□□□□ -1.24
VPS52-216ENST00000471309 TMEM89A2RUT3 159 aa7.3□□□□□ -1.24
VPS52-216ENST00000471309 OR2T8A6NH00 312 aa7.3□□□□□ -1.24
VPS52-216ENST00000471309 C11orf94C9JXX5 98 aa7.3□□□□□ -1.24
VPS52-216ENST00000471309 NUPL2O15504 423 aaKnown RBP7.3□□□□□ -1.24
VPS52-216ENST00000471309 PDE6DO43924 150 aa7.3□□□□□ -1.24
VPS52-216ENST00000471309 IGHV3-23P01764 117 aa7.3□□□□□ -1.24
VPS52-216ENST00000471309 TRGV3P03979 118 aa7.3□□□□□ -1.24
VPS52-216ENST00000471309 CTSGP08311 255 aa7.3□□□□□ -1.24
VPS52-216ENST00000471309 GPR183P32249 361 aa7.3□□□□□ -1.24
VPS52-216ENST00000471309 ADMP35318 185 aa7.3□□□□□ -1.24
VPS52-216ENST00000471309 TPPP2P59282 170 aa7.3□□□□□ -1.24
VPS52-216ENST00000471309 UBE2L3P68036 154 aaKnown RBP7.3□□□□□ -1.24
VPS52-216ENST00000471309 ATP5G2Q06055 141 aa7.3□□□□□ -1.24
VPS52-216ENST00000471309 SCGB2A2Q13296 93 aa7.3□□□□□ -1.24
VPS52-216ENST00000471309 GUCA2BQ16661 112 aa7.3□□□□□ -1.24
VPS52-216ENST00000471309 SOHLH1Q5JUK2 328 aa7.3□□□□□ -1.24
VPS52-216ENST00000471309 FAM90A2PQ658T7 463 aa7.3□□□□□ -1.24
VPS52-216ENST00000471309 ZNF491Q8N8L2 437 aa7.3□□□□□ -1.24
VPS52-216ENST00000471309 USMG5Q96IX5 58 aa7.3□□□□□ -1.24
VPS52-216ENST00000471309 MS4A10Q96PG2 267 aa7.3□□□□□ -1.24
VPS52-216ENST00000471309 PRSS22Q9GZN4 317 aa7.3□□□□□ -1.24
VPS52-216ENST00000471309 ZNF702PQ9H963 129 aa7.3□□□□□ -1.24
VPS52-216ENST00000471309 MRPL27Q9P0M9 148 aaKnown RBP7.3□□□□□ -1.24
VPS52-216ENST00000471309 LINC00527Q9UJ94 153 aa7.3□□□□□ -1.24
VPS52-216ENST00000471309 C2CD3Q4AC94 2353 aa7.3□□□□□ -1.24
VPS52-216ENST00000471309 VPS13CQ709C8 3753 aa7.3□□□□□ -1.24
VPS52-216ENST00000471309 ITPR3Q14573 2671 aa7.29□□□□□ -1.24
VPS52-216ENST00000471309 FAM74A7A6NL05 159 aa7.29□□□□□ -1.24
VPS52-216ENST00000471309 F6UZH7 168 aa7.29□□□□□ -1.24
VPS52-216ENST00000471309 H3BRN7 92 aa7.29□□□□□ -1.24
VPS52-216ENST00000471309 TGOLN2O43493 480 aa7.29□□□□□ -1.24
VPS52-216ENST00000471309 SNAPINO95295 136 aa7.29□□□□□ -1.24
VPS52-216ENST00000471309 IGHG4P01861 327 aa7.29□□□□□ -1.24
VPS52-216ENST00000471309 IL4P05112 153 aa7.29□□□□□ -1.24
VPS52-216ENST00000471309 ATP5G3P48201 142 aa7.29□□□□□ -1.24
VPS52-216ENST00000471309 USF2Q15853 346 aaPredicted RBP7.29□□□□□ -1.24
VPS52-216ENST00000471309 ZNF600Q6ZNG1 722 aa7.29□□□□□ -1.24
VPS52-216ENST00000471309 S100A7AQ86SG5 101 aa7.29□□□□□ -1.24
VPS52-216ENST00000471309 Q8N2B8 174 aa7.29□□□□□ -1.24
VPS52-216ENST00000471309 OR4F5Q8NH21 305 aa7.29□□□□□ -1.24
VPS52-216ENST00000471309 OR4F4Q96R69 305 aa7.29□□□□□ -1.24
VPS52-216ENST00000471309 SHANK2-AS3Q9BTD1 123 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms