RNA–Protein interactions for RNA: ENST00000467885.6

USP39-213, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 338 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-213ENST00000467885 BAP18Q8IXM2 172 aa4.57□□□□□ -1.68
USP39-213ENST00000467885 C11orf44Q8N8P7 122 aa4.57□□□□□ -1.68
USP39-213ENST00000467885 SCGB1C1Q8TD33 95 aa4.57□□□□□ -1.68
USP39-213ENST00000467885 EEF1AKMT3Q96AZ1 226 aa4.57□□□□□ -1.68
USP39-213ENST00000467885 OR5B12Q96R08 314 aa4.57□□□□□ -1.68
USP39-213ENST00000467885 PEF1Q9UBV8 284 aaKnown RBP4.57□□□□□ -1.68
USP39-213ENST00000467885 JMJD1CQ15652 2540 aa4.57□□□□□ -1.68
USP39-213ENST00000467885 BORCS7-ASMTA0A0B4J1R7 106 aa4.56□□□□□ -1.68
USP39-213ENST00000467885 KANTRA0A1W2PQU2 76 aa4.56□□□□□ -1.68
USP39-213ENST00000467885 OR2T8A6NH00 312 aa4.56□□□□□ -1.68
USP39-213ENST00000467885 ZFP92A6NM28 416 aa4.56□□□□□ -1.68
USP39-213ENST00000467885 PPP5D1E7EU14 171 aa4.56□□□□□ -1.68
USP39-213ENST00000467885 BMPR1BO00238 502 aa4.56□□□□□ -1.68
USP39-213ENST00000467885 TGOLN2O43493 480 aa4.56□□□□□ -1.68
USP39-213ENST00000467885 GNG7O60262 68 aa4.56□□□□□ -1.68
USP39-213ENST00000467885 GGCTO75223 188 aaKnown RBP4.56□□□□□ -1.68
USP39-213ENST00000467885 MPDU1O75352 247 aa4.56□□□□□ -1.68
USP39-213ENST00000467885 YIF1AO95070 293 aa4.56□□□□□ -1.68
USP39-213ENST00000467885 LGALS1P09382 135 aaKnown RBP4.56□□□□□ -1.68
USP39-213ENST00000467885 SEC11BP0C7V7 166 aa4.56□□□□□ -1.68
USP39-213ENST00000467885 FGF7P21781 194 aa4.56□□□□□ -1.68
USP39-213ENST00000467885 CAMLGP49069 296 aa4.56□□□□□ -1.68
USP39-213ENST00000467885 PLP1P60201 277 aa4.56□□□□□ -1.68
USP39-213ENST00000467885 SERF2P84101 59 aa4.56□□□□□ -1.68
USP39-213ENST00000467885 ZNF266Q14584 549 aa4.56□□□□□ -1.68
USP39-213ENST00000467885 Q56UQ5 140 aa4.56□□□□□ -1.68
USP39-213ENST00000467885 MIC13Q5XKP0 118 aa4.56□□□□□ -1.68
USP39-213ENST00000467885 SPSB3Q6PJ21 355 aa4.56□□□□□ -1.68
USP39-213ENST00000467885 TOMM20LQ6UXN7 152 aa4.56□□□□□ -1.68
USP39-213ENST00000467885 CYP2G1PQ6ZSU1 146 aa4.56□□□□□ -1.68
USP39-213ENST00000467885 GPHB5Q86YW7 130 aa4.56□□□□□ -1.68
USP39-213ENST00000467885 STPG3Q8N7X2 389 aa4.56□□□□□ -1.68
USP39-213ENST00000467885 OR1N2Q8NGR9 330 aa4.56□□□□□ -1.68
USP39-213ENST00000467885 STOML3Q8TAV4 291 aa4.56□□□□□ -1.68
USP39-213ENST00000467885 Q8WTZ3 238 aa4.56□□□□□ -1.68
USP39-213ENST00000467885 TMEM37Q8WXS4 190 aa4.56□□□□□ -1.68
USP39-213ENST00000467885 SLC35E1Q96K37 410 aa4.56□□□□□ -1.68
USP39-213ENST00000467885 CITED1Q99966 193 aa4.56□□□□□ -1.68
USP39-213ENST00000467885 RSG1Q9BU20 258 aa4.56□□□□□ -1.68
USP39-213ENST00000467885 ZNF747Q9BV97 191 aa4.56□□□□□ -1.68
USP39-213ENST00000467885 C19orf24Q9BVV8 132 aa4.56□□□□□ -1.68
USP39-213ENST00000467885 GGTLC1Q9BX51 225 aa4.56□□□□□ -1.68
USP39-213ENST00000467885 ZNF471Q9BX82 626 aaPredicted RBP4.56□□□□□ -1.68
USP39-213ENST00000467885 SH3BGRL3Q9H299 93 aa4.56□□□□□ -1.68
USP39-213ENST00000467885 VSIRQ9H7M9 311 aa4.56□□□□□ -1.68
USP39-213ENST00000467885 GAR1Q9NY12 217 aaKnown RBP4.56□□□□□ -1.68
USP39-213ENST00000467885 MRPL27Q9P0M9 148 aaKnown RBP4.56□□□□□ -1.68
USP39-213ENST00000467885 TSSC4Q9Y5U2 329 aaPredicted RBP4.56□□□□□ -1.68
USP39-213ENST00000467885 U3KQE9 123 aa4.56□□□□□ -1.68
USP39-213ENST00000467885 IGHV4OR15-8A0A075B7B6 117 aa4.55□□□□□ -1.68
USP39-213ENST00000467885 A0A087WW49 117 aa4.55□□□□□ -1.68
USP39-213ENST00000467885 IGHV3-35A0A0C4DH35 117 aa4.55□□□□□ -1.68
USP39-213ENST00000467885 UBE2L5PA0A1B0GUS4 154 aa4.55□□□□□ -1.68
USP39-213ENST00000467885 SMCO3A2RU48 225 aa4.55□□□□□ -1.68
USP39-213ENST00000467885 NUPL2O15504 423 aaKnown RBP4.55□□□□□ -1.68
USP39-213ENST00000467885 TOMM40O96008 361 aa4.55□□□□□ -1.68
USP39-213ENST00000467885 C4BPBP20851 252 aa4.55□□□□□ -1.68
USP39-213ENST00000467885 GPR183P32249 361 aa4.55□□□□□ -1.68
USP39-213ENST00000467885 SELENOTP62341 195 aa4.55□□□□□ -1.68
USP39-213ENST00000467885 RAB31Q13636 194 aa4.55□□□□□ -1.68
USP39-213ENST00000467885 GCSAMLQ5JQS6 135 aa4.55□□□□□ -1.68
USP39-213ENST00000467885 TEX261Q6UWH6 196 aa4.55□□□□□ -1.68
USP39-213ENST00000467885 UNQ9165/PRO28630Q6UXU0 137 aa4.55□□□□□ -1.68
USP39-213ENST00000467885 IL34Q6ZMJ4 242 aa4.55□□□□□ -1.68
USP39-213ENST00000467885 NDUFA11Q86Y39 141 aa4.55□□□□□ -1.68
USP39-213ENST00000467885 RPP25LQ8N5L8 163 aaKnown RBP4.55□□□□□ -1.68
USP39-213ENST00000467885 HSD17B11Q8NBQ5 300 aa4.55□□□□□ -1.68
USP39-213ENST00000467885 ZNF680Q8NEM1 530 aa4.55□□□□□ -1.68
USP39-213ENST00000467885 BPIFCQ8NFQ6 507 aa4.55□□□□□ -1.68
USP39-213ENST00000467885 OR11H1Q8NG94 326 aa4.55□□□□□ -1.68
USP39-213ENST00000467885 OR2G3Q8NGZ4 309 aa4.55□□□□□ -1.68
USP39-213ENST00000467885 C4orf3Q8WVX3 66 aa4.55□□□□□ -1.68
USP39-213ENST00000467885 TMEM158Q8WZ71 300 aa4.55□□□□□ -1.68
USP39-213ENST00000467885 ST8SIA2Q92186 375 aa4.55□□□□□ -1.68
USP39-213ENST00000467885 GNPNAT1Q96EK6 184 aaPredicted RBP4.55□□□□□ -1.68
USP39-213ENST00000467885 RAX2Q96IS3 184 aa4.55□□□□□ -1.68
USP39-213ENST00000467885 PSMG3Q9BT73 122 aaPredicted RBP4.55□□□□□ -1.68
USP39-213ENST00000467885 NPCDR1Q9BY65 106 aa4.55□□□□□ -1.68
USP39-213ENST00000467885 SLC25A32Q9H2D1 315 aa4.55□□□□□ -1.68
USP39-213ENST00000467885 DNAJC4Q9NNZ3 241 aa4.55□□□□□ -1.68
USP39-213ENST00000467885 RPRMQ9NS64 109 aa4.55□□□□□ -1.68
USP39-213ENST00000467885 SLC39A9Q9NUM3 307 aa4.55□□□□□ -1.68
USP39-213ENST00000467885 TIMM9Q9Y5J7 89 aa4.55□□□□□ -1.68
USP39-213ENST00000467885 C2CD3Q4AC94 2353 aa4.55□□□□□ -1.68
USP39-213ENST00000467885 K7EMT4 169 aa4.54□□□□□ -1.68
USP39-213ENST00000467885 CCL24O00175 119 aa4.54□□□□□ -1.68
USP39-213ENST00000467885 LGALS9O00182 355 aa4.54□□□□□ -1.68
USP39-213ENST00000467885 APOHP02749 345 aaPredicted RBP4.54□□□□□ -1.68
USP39-213ENST00000467885 C8orf88P0DMB2 117 aa4.54□□□□□ -1.68
USP39-213ENST00000467885 TPT1P13693 172 aaKnown RBP4.54□□□□□ -1.68
USP39-213ENST00000467885 ARL3P36405 182 aa4.54□□□□□ -1.68
USP39-213ENST00000467885 MYCNOSP40205 109 aa4.54□□□□□ -1.68
USP39-213ENST00000467885 EIF5AP63241 154 aaKnown RBP4.54□□□□□ -1.68
USP39-213ENST00000467885 AKR1C1Q04828 323 aa4.54□□□□□ -1.68
USP39-213ENST00000467885 ZNF616Q08AN1 781 aa4.54□□□□□ -1.68
USP39-213ENST00000467885 FAM209BQ5JX69 171 aa4.54□□□□□ -1.68
USP39-213ENST00000467885 ADAMTSL5Q6ZMM2 481 aa4.54□□□□□ -1.68
USP39-213ENST00000467885 ZNF600Q6ZNG1 722 aa4.54□□□□□ -1.68
USP39-213ENST00000467885 ZNF709Q8N972 641 aa4.54□□□□□ -1.68
USP39-213ENST00000467885 OR51G1Q8NGK1 321 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms