RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 IGKV1OR2-108A0A075B7D4 117 aa9.6□□□□□ -0.87
COL5A1-206ENST00000465877 DFFBO76075 338 aa9.6□□□□□ -0.87
COL5A1-206ENST00000465877 MBPP02686 304 aaPredicted RBP9.6□□□□□ -0.87
COL5A1-206ENST00000465877 IL5P05113 134 aa9.6□□□□□ -0.87
COL5A1-206ENST00000465877 RD3LP0DJH9 198 aa9.6□□□□□ -0.87
COL5A1-206ENST00000465877 PAX9P55771 341 aa9.6□□□□□ -0.87
COL5A1-206ENST00000465877 DEFA1P59665 94 aa9.6□□□□□ -0.87
COL5A1-206ENST00000465877 DEFA3P59666 94 aa9.6□□□□□ -0.87
COL5A1-206ENST00000465877 ZNF90Q03938 601 aa9.6□□□□□ -0.87
COL5A1-206ENST00000465877 AKR1C1Q04828 323 aa9.6□□□□□ -0.87
COL5A1-206ENST00000465877 LILRB2Q8N423 598 aa9.6□□□□□ -0.87
COL5A1-206ENST00000465877 GBGT1Q8N5D6 347 aa9.6□□□□□ -0.87
COL5A1-206ENST00000465877 GRAMD2BQ96HH9 432 aa9.6□□□□□ -0.87
COL5A1-206ENST00000465877 SMIM8Q96KF7 97 aa9.6□□□□□ -0.87
COL5A1-206ENST00000465877 CITED4Q96RK1 184 aa9.6□□□□□ -0.87
COL5A1-206ENST00000465877 RAB40CQ96S21 281 aa9.6□□□□□ -0.87
COL5A1-206ENST00000465877 FAM110AQ9BQ89 295 aa9.6□□□□□ -0.87
COL5A1-206ENST00000465877 RABAC1Q9UI14 185 aa9.6□□□□□ -0.87
COL5A1-206ENST00000465877 CSMD3Q7Z407 3707 aa9.6□□□□□ -0.87
COL5A1-206ENST00000465877 STARD9Q9P2P6 4700 aa9.59□□□□□ -0.87
COL5A1-206ENST00000465877 C5orf51A6NDU8 294 aa9.59□□□□□ -0.87
COL5A1-206ENST00000465877 PMS2P5A8MQ11 134 aa9.59□□□□□ -0.87
COL5A1-206ENST00000465877 TSC22D2O75157 780 aa9.59□□□□□ -0.87
COL5A1-206ENST00000465877 CCNKO75909 580 aa9.59□□□□□ -0.87
COL5A1-206ENST00000465877 FABP1P07148 127 aa9.59□□□□□ -0.87
COL5A1-206ENST00000465877 LYZP61626 148 aa9.59□□□□□ -0.87
COL5A1-206ENST00000465877 RPL11P62913 178 aaKnown RBP9.59□□□□□ -0.87
COL5A1-206ENST00000465877 PAFAH1B2P68402 229 aa9.59□□□□□ -0.87
COL5A1-206ENST00000465877 OR8G2PQ6IF36 304 aa9.59□□□□□ -0.87
COL5A1-206ENST00000465877 TMEM14EPQ6UXP3 125 aa9.59□□□□□ -0.87
COL5A1-206ENST00000465877 GLMPQ8WWB7 406 aa9.59□□□□□ -0.87
COL5A1-206ENST00000465877 TRGV9Q99603 122 aa9.59□□□□□ -0.87
COL5A1-206ENST00000465877 PBDC1Q9BVG4 233 aa9.59□□□□□ -0.87
COL5A1-206ENST00000465877 GGTLC1Q9BX51 225 aa9.59□□□□□ -0.87
COL5A1-206ENST00000465877 MS4A6AQ9H2W1 248 aa9.59□□□□□ -0.87
COL5A1-206ENST00000465877 MAP6D1Q9H9H5 199 aa9.59□□□□□ -0.87
COL5A1-206ENST00000465877 GPN1Q9HCN4 374 aaPredicted RBP9.59□□□□□ -0.87
COL5A1-206ENST00000465877 LSM5Q9Y4Y9 91 aaKnown RBP9.59□□□□□ -0.87
COL5A1-206ENST00000465877 U3KQE9 123 aa9.59□□□□□ -0.87
COL5A1-206ENST00000465877 LOC102724200A0A096LPH7 203 aaPredicted RBP9.58□□□□□ -0.88
COL5A1-206ENST00000465877 TRAV2A0A0B4J234 112 aa9.58□□□□□ -0.88
COL5A1-206ENST00000465877 SMCO3A2RU48 225 aa9.58□□□□□ -0.88
COL5A1-206ENST00000465877 C7orf66A4D0T2 115 aa9.58□□□□□ -0.88
COL5A1-206ENST00000465877 K7EPK0 472 aa9.58□□□□□ -0.88
COL5A1-206ENST00000465877 PRAF2O60831 178 aa9.58□□□□□ -0.88
COL5A1-206ENST00000465877 METTL15P1P0C7V9 234 aa9.58□□□□□ -0.88
COL5A1-206ENST00000465877 NUP62P37198 522 aaPredicted RBP9.58□□□□□ -0.88
COL5A1-206ENST00000465877 EIF2B2P49770 351 aaKnown RBP9.58□□□□□ -0.88
COL5A1-206ENST00000465877 TAS2R30P59541 319 aa9.58□□□□□ -0.88
COL5A1-206ENST00000465877 STXBP6Q8NFX7 210 aa9.58□□□□□ -0.88
COL5A1-206ENST00000465877 RETNQ9HD89 108 aa9.58□□□□□ -0.88
COL5A1-206ENST00000465877 KMT2CQ8NEZ4 4911 aaKnown RBP9.57□□□□□ -0.88
COL5A1-206ENST00000465877 HELTA6NFD8 242 aa9.57□□□□□ -0.88
COL5A1-206ENST00000465877 INMT-MINDY4F8WBC2 141 aa9.57□□□□□ -0.88
COL5A1-206ENST00000465877 DNASE2O00115 360 aaPredicted RBP9.57□□□□□ -0.88
COL5A1-206ENST00000465877 S100A10P60903 97 aa9.57□□□□□ -0.88
COL5A1-206ENST00000465877 RRAS2P62070 204 aaPredicted RBP9.57□□□□□ -0.88
COL5A1-206ENST00000465877 OR2F1Q13607 317 aa9.57□□□□□ -0.88
COL5A1-206ENST00000465877 ZNF124Q15973 351 aa9.57□□□□□ -0.88
COL5A1-206ENST00000465877 C16orf54Q6UWD8 224 aa9.57□□□□□ -0.88
COL5A1-206ENST00000465877 GSG1LQ6UXU4 331 aa9.57□□□□□ -0.88
COL5A1-206ENST00000465877 WFDC3Q8IUB2 231 aa9.57□□□□□ -0.88
COL5A1-206ENST00000465877 APRG1Q8IVJ8 170 aa9.57□□□□□ -0.88
COL5A1-206ENST00000465877 FAM24BQ8N5W8 94 aa9.57□□□□□ -0.88
COL5A1-206ENST00000465877 C2orf50Q96LR7 162 aa9.57□□□□□ -0.88
COL5A1-206ENST00000465877 SNRPGP15A8MWD9 76 aa9.56□□□□□ -0.88
COL5A1-206ENST00000465877 L7N2F9 121 aa9.56□□□□□ -0.88
COL5A1-206ENST00000465877 GOSR2O14653 212 aa9.56□□□□□ -0.88
COL5A1-206ENST00000465877 BUB3O43684 328 aa9.56□□□□□ -0.88
COL5A1-206ENST00000465877 VAMP2P63027 116 aa9.56□□□□□ -0.88
COL5A1-206ENST00000465877 DLK1P80370 383 aa9.56□□□□□ -0.88
COL5A1-206ENST00000465877 SIGLEC15Q6ZMC9 328 aa9.56□□□□□ -0.88
COL5A1-206ENST00000465877 DCANP1Q8TF63 244 aa9.56□□□□□ -0.88
COL5A1-206ENST00000465877 MARVELD1Q9BSK0 173 aa9.56□□□□□ -0.88
COL5A1-206ENST00000465877 C11orf1Q9H5F2 150 aa9.56□□□□□ -0.88
COL5A1-206ENST00000465877 MGAT4CQ9UBM8 478 aa9.56□□□□□ -0.88
COL5A1-206ENST00000465877 K7EQG2 157 aa9.55□□□□□ -0.88
COL5A1-206ENST00000465877 CAV2P51636 162 aa9.55□□□□□ -0.88
COL5A1-206ENST00000465877 APOC4P55056 127 aa9.55□□□□□ -0.88
COL5A1-206ENST00000465877 RAB32Q13637 225 aa9.55□□□□□ -0.88
COL5A1-206ENST00000465877 TMEM144Q7Z5S9 345 aa9.55□□□□□ -0.88
COL5A1-206ENST00000465877 BPIFCQ8NFQ6 507 aa9.55□□□□□ -0.88
COL5A1-206ENST00000465877 OR10P1Q8NGE3 313 aa9.55□□□□□ -0.88
COL5A1-206ENST00000465877 FNDC10F2Z333 226 aa9.54□□□□□ -0.88
COL5A1-206ENST00000465877 CFDP00746 253 aaPredicted RBP9.54□□□□□ -0.88
COL5A1-206ENST00000465877 RPL35AP18077 110 aaKnown RBP9.54□□□□□ -0.88
COL5A1-206ENST00000465877 PVALBP20472 110 aaPredicted RBP9.54□□□□□ -0.88
COL5A1-206ENST00000465877 GATA2P23769 480 aaPredicted RBP9.54□□□□□ -0.88
COL5A1-206ENST00000465877 BCAP31P51572 246 aa9.54□□□□□ -0.88
COL5A1-206ENST00000465877 CMC4P56277 68 aaPredicted RBP9.54□□□□□ -0.88
COL5A1-206ENST00000465877 DEFB131AP59861 70 aa9.54□□□□□ -0.88
COL5A1-206ENST00000465877 ARL16Q0P5N6 197 aa9.54□□□□□ -0.88
COL5A1-206ENST00000465877 LEMD1Q68G75 181 aa9.54□□□□□ -0.88
COL5A1-206ENST00000465877 CYP2G1PQ6ZSU1 146 aa9.54□□□□□ -0.88
COL5A1-206ENST00000465877 NRN1Q9NPD7 142 aa9.54□□□□□ -0.88
COL5A1-206ENST00000465877 PFDN2Q9UHV9 154 aa9.54□□□□□ -0.88
COL5A1-206ENST00000465877 AGRNO00468 2067 aa9.53□□□□□ -0.88
COL5A1-206ENST00000465877 ZNF688P0C7X2 276 aa9.53□□□□□ -0.88
COL5A1-206ENST00000465877 AP2S1P53680 142 aaPredicted RBP9.53□□□□□ -0.88
COL5A1-206ENST00000465877 SLC38A11Q08AI6 406 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 138.3 ms