RNA–Protein interactions for RNA: ENST00000465282.5

USP39-211, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-211ENST00000465282 HAPLN4Q86UW8 402 aa12.81□□□□□ -0.36
USP39-211ENST00000465282 RNF126Q9BV68 326 aa12.81□□□□□ -0.36
USP39-211ENST00000465282 AURKAIP1Q9NWT8 199 aaPredicted RBP12.81□□□□□ -0.36
USP39-211ENST00000465282 OR5AC2Q9NZP5 309 aa12.81□□□□□ -0.36
USP39-211ENST00000465282 MLXQ9UH92 298 aa12.81□□□□□ -0.36
USP39-211ENST00000465282 PFDN2Q9UHV9 154 aa12.81□□□□□ -0.36
USP39-211ENST00000465282 IGHV3OR16-8A0A075B7F1 116 aa12.8□□□□□ -0.36
USP39-211ENST00000465282 WI2-2373I1.2A0A1W2PRP0 233 aa12.8□□□□□ -0.36
USP39-211ENST00000465282 SMCO3A2RU48 225 aa12.8□□□□□ -0.36
USP39-211ENST00000465282 H0YIZ8 118 aa12.8□□□□□ -0.36
USP39-211ENST00000465282 CHEK1O14757 476 aa12.8□□□□□ -0.36
USP39-211ENST00000465282 CST7O76096 145 aa12.8□□□□□ -0.36
USP39-211ENST00000465282 GIPP09681 153 aaPredicted RBP12.8□□□□□ -0.36
USP39-211ENST00000465282 GP9P14770 177 aa12.8□□□□□ -0.36
USP39-211ENST00000465282 EDN2P20800 178 aa12.8□□□□□ -0.36
USP39-211ENST00000465282 NUP62P37198 522 aaPredicted RBP12.8□□□□□ -0.36
USP39-211ENST00000465282 SELENOTP62341 195 aa12.8□□□□□ -0.36
USP39-211ENST00000465282 ZNF90Q03938 601 aa12.8□□□□□ -0.36
USP39-211ENST00000465282 ARL16Q0P5N6 197 aa12.8□□□□□ -0.36
USP39-211ENST00000465282 BTNL8Q6UX41 500 aa12.8□□□□□ -0.36
USP39-211ENST00000465282 RHPN1-AS1Q9BWJ2 59 aa12.8□□□□□ -0.36
USP39-211ENST00000465282 VSIRQ9H7M9 311 aa12.8□□□□□ -0.36
USP39-211ENST00000465282 IGSF23A1L1A6 192 aa12.79□□□□□ -0.36
USP39-211ENST00000465282 ZNF207O43670 478 aaKnown RBP12.79□□□□□ -0.36
USP39-211ENST00000465282 IL4P05112 153 aa12.79□□□□□ -0.36
USP39-211ENST00000465282 LYL1P12980 280 aa12.79□□□□□ -0.36
USP39-211ENST00000465282 RAP2BP61225 183 aa12.79□□□□□ -0.36
USP39-211ENST00000465282 RBPMS2Q6ZRY4 209 aaKnown RBP12.79□□□□□ -0.36
USP39-211ENST00000465282 THAP6Q8TBB0 222 aa12.79□□□□□ -0.36
USP39-211ENST00000465282 RNF125Q96EQ8 232 aa12.79□□□□□ -0.36
USP39-211ENST00000465282 WDR89Q96FK6 387 aaPredicted RBP12.79□□□□□ -0.36
USP39-211ENST00000465282 HNRNPCP07910 306 aaKnown RBP eCLIP12.78□□□□□ -0.36
USP39-211ENST00000465282 S100A7P31151 101 aa12.78□□□□□ -0.36
USP39-211ENST00000465282 RAB31Q13636 194 aa12.78□□□□□ -0.36
USP39-211ENST00000465282 VWC2Q2TAL6 325 aa12.78□□□□□ -0.36
USP39-211ENST00000465282 LILRB2Q8N423 598 aa12.78□□□□□ -0.36
USP39-211ENST00000465282 TMEM217Q8N7C4 229 aa12.78□□□□□ -0.36
USP39-211ENST00000465282 BPIFCQ8NFQ6 507 aa12.78□□□□□ -0.36
USP39-211ENST00000465282 GRAMD2BQ96HH9 432 aa12.78□□□□□ -0.36
USP39-211ENST00000465282 TMEM147Q9BVK8 224 aa12.78□□□□□ -0.36
USP39-211ENST00000465282 UQCC1Q9NVA1 299 aa12.78□□□□□ -0.36
USP39-211ENST00000465282 RABAC1Q9UI14 185 aa12.78□□□□□ -0.36
USP39-211ENST00000465282 LSM4Q9Y4Z0 139 aaKnown RBP12.78□□□□□ -0.36
USP39-211ENST00000465282 U3KQE9 123 aa12.78□□□□□ -0.36
USP39-211ENST00000465282 IZUMO1RA6ND01 250 aa12.77□□□□□ -0.37
USP39-211ENST00000465282 ZNF785A8K8V0 405 aa12.77□□□□□ -0.37
USP39-211ENST00000465282 TSPAN4O14817 238 aa12.77□□□□□ -0.37
USP39-211ENST00000465282 EWSR1Q01844 656 aaKnown RBP eCLIP12.77□□□□□ -0.37
USP39-211ENST00000465282 CYP2G1PQ6ZSU1 146 aa12.77□□□□□ -0.37
USP39-211ENST00000465282 TMEM61Q8N0U2 210 aa12.77□□□□□ -0.37
USP39-211ENST00000465282 SLC45A2Q9UMX9 530 aa12.77□□□□□ -0.37
USP39-211ENST00000465282 MPDU1O75352 247 aa12.76□□□□□ -0.37
USP39-211ENST00000465282 EIF2B2P49770 351 aaKnown RBP12.76□□□□□ -0.37
USP39-211ENST00000465282 NHLH2Q02577 135 aa12.76□□□□□ -0.37
USP39-211ENST00000465282 USF2Q15853 346 aaPredicted RBP12.76□□□□□ -0.37
USP39-211ENST00000465282 S100A7AQ86SG5 101 aa12.76□□□□□ -0.37
USP39-211ENST00000465282 ZNF546Q86UE3 836 aa12.76□□□□□ -0.37
USP39-211ENST00000465282 GTSCR1Q86UQ5 136 aa12.76□□□□□ -0.37
USP39-211ENST00000465282 PRR25Q96S07 402 aa12.76□□□□□ -0.37
USP39-211ENST00000465282 SPAG8Q99932 426 aaPredicted RBP12.76□□□□□ -0.37
USP39-211ENST00000465282 MBD2Q9UBB5 411 aa12.76□□□□□ -0.37
USP39-211ENST00000465282 K7EIL1 84 aa12.75□□□□□ -0.37
USP39-211ENST00000465282 PRB2P02812 416 aaPredicted RBP12.75□□□□□ -0.37
USP39-211ENST00000465282 RPL12P30050 165 aaKnown RBP12.75□□□□□ -0.37
USP39-211ENST00000465282 PLP1P60201 277 aa12.75□□□□□ -0.37
USP39-211ENST00000465282 OR2F1Q13607 317 aa12.75□□□□□ -0.37
USP39-211ENST00000465282 GUCA2BQ16661 112 aa12.75□□□□□ -0.37
USP39-211ENST00000465282 PXDC1Q5TGL8 231 aa12.75□□□□□ -0.37
USP39-211ENST00000465282 FAM90A2PQ658T7 463 aa12.75□□□□□ -0.37
USP39-211ENST00000465282 CHAC2Q8WUX2 184 aa12.75□□□□□ -0.37
USP39-211ENST00000465282 ST8SIA2Q92186 375 aa12.75□□□□□ -0.37
USP39-211ENST00000465282 RNF2Q99496 336 aa12.75□□□□□ -0.37
USP39-211ENST00000465282 WDR83OSQ9Y284 106 aa12.75□□□□□ -0.37
USP39-211ENST00000465282 IGHV3-49A0A0A0MS15 119 aa12.74□□□□□ -0.37
USP39-211ENST00000465282 AGPAT2O15120 278 aa12.74□□□□□ -0.37
USP39-211ENST00000465282 APOHP02749 345 aaPredicted RBP12.74□□□□□ -0.37
USP39-211ENST00000465282 AP2S1P53680 142 aaPredicted RBP12.74□□□□□ -0.37
USP39-211ENST00000465282 LYZP61626 148 aa12.74□□□□□ -0.37
USP39-211ENST00000465282 PAFAH1B2P68402 229 aa12.74□□□□□ -0.37
USP39-211ENST00000465282 C1orf194Q5T5A4 169 aa12.74□□□□□ -0.37
USP39-211ENST00000465282 OR5C1Q8NGR4 320 aa12.74□□□□□ -0.37
USP39-211ENST00000465282 MRAPQ8TCY5 172 aa12.74□□□□□ -0.37
USP39-211ENST00000465282 PBDC1Q9BVG4 233 aa12.74□□□□□ -0.37
USP39-211ENST00000465282 HELTA6NFD8 242 aa12.73□□□□□ -0.37
USP39-211ENST00000465282 OR4C46A6NHA9 309 aa12.73□□□□□ -0.37
USP39-211ENST00000465282 BUB3O43684 328 aa12.73□□□□□ -0.37
USP39-211ENST00000465282 C16orf54Q6UWD8 224 aa12.73□□□□□ -0.37
USP39-211ENST00000465282 TCF24Q7RTU0 167 aa12.73□□□□□ -0.37
USP39-211ENST00000465282 RNF24Q9Y225 148 aa12.73□□□□□ -0.37
USP39-211ENST00000465282 HSPB11Q9Y547 144 aa12.73□□□□□ -0.37
USP39-211ENST00000465282 IGHV3OR16-13A0A075B7E8 117 aa12.72□□□□□ -0.37
USP39-211ENST00000465282 IGHV3-74A0A0B4J1X5 117 aa12.72□□□□□ -0.37
USP39-211ENST00000465282 TRAV2A0A0B4J234 112 aa12.72□□□□□ -0.37
USP39-211ENST00000465282 DFFBO76075 338 aa12.72□□□□□ -0.37
USP39-211ENST00000465282 LINC00869P0C866 280 aa12.72□□□□□ -0.37
USP39-211ENST00000465282 CAMLGP49069 296 aa12.72□□□□□ -0.37
USP39-211ENST00000465282 CMC4P56277 68 aaPredicted RBP12.72□□□□□ -0.37
USP39-211ENST00000465282 TMEM182Q6ZP80 229 aaPredicted RBP12.72□□□□□ -0.37
USP39-211ENST00000465282 Q8N1Y9 231 aa12.72□□□□□ -0.37
USP39-211ENST00000465282 OR2T35Q8NGX2 323 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 104.8 ms