RNA–Protein interactions for RNA: ENST00000465073.6

USP42-205, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-205ENST00000465073 CTDSP2O14595 271 aa16.37■□□□□ 0.21
USP42-205ENST00000465073 IFNA10P01566 189 aa16.37■□□□□ 0.21
USP42-205ENST00000465073 HLA-DRB4P13762 266 aa16.37■□□□□ 0.21
USP42-205ENST00000465073 NKX2-1P43699 371 aaPredicted RBP16.37■□□□□ 0.21
USP42-205ENST00000465073 ZNF767PQ75MW2 155 aa16.37■□□□□ 0.21
USP42-205ENST00000465073 OR4C16Q8NGL9 310 aa16.37■□□□□ 0.21
USP42-205ENST00000465073 HLA-DRB4X5D2U9 266 aa16.37■□□□□ 0.21
USP42-205ENST00000465073 CTDSPLO15194 276 aa16.36■□□□□ 0.21
USP42-205ENST00000465073 SMIM18P0DKX4 95 aa16.36■□□□□ 0.21
USP42-205ENST00000465073 KLF9Q13886 244 aaPredicted RBP16.36■□□□□ 0.21
USP42-205ENST00000465073 OR51G1Q8NGK1 321 aa16.36■□□□□ 0.21
USP42-205ENST00000465073 P0DMU3 169 aa16.35■□□□□ 0.21
USP42-205ENST00000465073 FAM231AP0DMU4 169 aa16.35■□□□□ 0.21
USP42-205ENST00000465073 FAM231CP0DMU5 169 aa16.35■□□□□ 0.21
USP42-205ENST00000465073 POM121L12Q8N7R1 296 aa16.35■□□□□ 0.21
USP42-205ENST00000465073 OR51S1Q8NGJ8 323 aa16.35■□□□□ 0.21
USP42-205ENST00000465073 RNF125Q96EQ8 232 aa16.35■□□□□ 0.21
USP42-205ENST00000465073 NEU1Q99519 415 aa16.35■□□□□ 0.21
USP42-205ENST00000465073 NDUFAF3Q9BU61 184 aa16.35■□□□□ 0.21
USP42-205ENST00000465073 RABL2AQ9UBK7 228 aaPredicted RBP16.35■□□□□ 0.21
USP42-205ENST00000465073 RABL2BQ9UNT1 228 aa16.35■□□□□ 0.21
USP42-205ENST00000465073 CCR6P51684 374 aa16.35■□□□□ 0.21
USP42-205ENST00000465073 OR8G2PQ6IF36 304 aa16.35■□□□□ 0.21
USP42-205ENST00000465073 ZNF705AQ6ZN79 300 aaPredicted RBP16.35■□□□□ 0.21
USP42-205ENST00000465073 LGI3Q8N145 548 aa16.35■□□□□ 0.21
USP42-205ENST00000465073 HSPB7Q9UBY9 170 aa16.35■□□□□ 0.21
USP42-205ENST00000465073 SMIM9A6NGZ8 99 aa16.34■□□□□ 0.21
USP42-205ENST00000465073 ATP5IP56385 69 aaPredicted RBP16.34■□□□□ 0.21
USP42-205ENST00000465073 SMCO1Q147U7 214 aa16.34■□□□□ 0.21
USP42-205ENST00000465073 CLVS1Q8IUQ0 354 aaPredicted RBP16.34■□□□□ 0.21
USP42-205ENST00000465073 DTD1Q8TEA8 209 aa16.34■□□□□ 0.21
USP42-205ENST00000465073 SCGB3A2Q96PL1 93 aa16.34■□□□□ 0.21
USP42-205ENST00000465073 TMEM189A5PLL7 270 aa16.33■□□□□ 0.2
USP42-205ENST00000465073 ZNF705FA8MVS1 300 aaPredicted RBP16.33■□□□□ 0.2
USP42-205ENST00000465073 ZNF705DP0CH99 300 aaPredicted RBP16.33■□□□□ 0.2
USP42-205ENST00000465073 ZNF705BP0CI00 300 aaPredicted RBP16.33■□□□□ 0.2
USP42-205ENST00000465073 IL18Q14116 193 aa16.33■□□□□ 0.2
USP42-205ENST00000465073 PBDC1Q9BVG4 233 aa16.33■□□□□ 0.2
USP42-205ENST00000465073 SCP2D1Q9UJQ7 156 aa16.33■□□□□ 0.2
USP42-205ENST00000465073 A0A0B4J2A0 478 aa16.32■□□□□ 0.2
USP42-205ENST00000465073 SPART-AS1P0CW21 52 aa16.32■□□□□ 0.2
USP42-205ENST00000465073 GPX4P36969 197 aaPredicted RBP16.32■□□□□ 0.2
USP42-205ENST00000465073 ID1P41134 155 aa16.32■□□□□ 0.2
USP42-205ENST00000465073 DIRAS2Q96HU8 199 aa16.32■□□□□ 0.2
USP42-205ENST00000465073 CLUHP3Q96NS8 147 aa16.32■□□□□ 0.2
USP42-205ENST00000465073 RBKSQ9H477 322 aa16.32■□□□□ 0.2
USP42-205ENST00000465073 PRR13Q9NZ81 148 aa16.32■□□□□ 0.2
USP42-205ENST00000465073 SHPKQ9UHJ6 478 aa16.32■□□□□ 0.2
USP42-205ENST00000465073 KIAA1109Q2LD37 5005 aa16.32■□□□□ 0.2
USP42-205ENST00000465073 ANKRD20A5PA0PJZ0 165 aa16.31■□□□□ 0.2
USP42-205ENST00000465073 ZFP92A6NM28 416 aa16.31■□□□□ 0.2
USP42-205ENST00000465073 GAMTQ14353 236 aa16.31■□□□□ 0.2
USP42-205ENST00000465073 SPCS2Q15005 226 aa16.31■□□□□ 0.2
USP42-205ENST00000465073 C1orf194Q5T5A4 169 aa16.31■□□□□ 0.2
USP42-205ENST00000465073 GPR141Q7Z602 305 aa16.31■□□□□ 0.2
USP42-205ENST00000465073 LINC00052Q96N35 136 aa16.31■□□□□ 0.2
USP42-205ENST00000465073 SAV1Q9H4B6 383 aaPredicted RBP16.31■□□□□ 0.2
USP42-205ENST00000465073 FABP1P07148 127 aa16.3■□□□□ 0.2
USP42-205ENST00000465073 PSMB3P49720 205 aa16.3■□□□□ 0.2
USP42-205ENST00000465073 GDF5OSQ5U4N7 250 aa16.3■□□□□ 0.2
USP42-205ENST00000465073 FOXI2Q6ZQN5 318 aa16.3■□□□□ 0.2
USP42-205ENST00000465073 LYZL2Q7Z4W2 148 aa16.3■□□□□ 0.2
USP42-205ENST00000465073 SCRT1Q9BWW7 348 aa16.3■□□□□ 0.2
USP42-205ENST00000465073 WDR12Q9GZL7 423 aaKnown RBP16.3■□□□□ 0.2
USP42-205ENST00000465073 IGKV3-20P01619 116 aa16.29■□□□□ 0.2
USP42-205ENST00000465073 AKR1C4P17516 323 aa16.29■□□□□ 0.2
USP42-205ENST00000465073 SRPXP78539 464 aa16.29■□□□□ 0.2
USP42-205ENST00000465073 ZNF90Q03938 601 aa16.29■□□□□ 0.2
USP42-205ENST00000465073 SLC35E1Q96K37 410 aa16.29■□□□□ 0.2
USP42-205ENST00000465073 RFNGQ9Y644 331 aa16.29■□□□□ 0.2
USP42-205ENST00000465073 PCLOQ9Y6V0 5065 aa16.29■□□□□ 0.2
USP42-205ENST00000465073 IGKV1D-37A0A075B6S9 117 aa16.29■□□□□ 0.2
USP42-205ENST00000465073 EMP1P54849 157 aa16.29■□□□□ 0.2
USP42-205ENST00000465073 SUPT4H1P63272 117 aaKnown RBP16.29■□□□□ 0.2
USP42-205ENST00000465073 SPATA31B1PQ5VZV4 182 aa16.29■□□□□ 0.2
USP42-205ENST00000465073 FAM210BQ96KR6 192 aa16.29■□□□□ 0.2
USP42-205ENST00000465073 RSL24D1Q9UHA3 163 aaKnown RBP16.29■□□□□ 0.2
USP42-205ENST00000465073 PIGBOS1A0A0B4J2F0 54 aa16.28■□□□□ 0.2
USP42-205ENST00000465073 TEX48A0A1B0GUV7 120 aa16.28■□□□□ 0.2
USP42-205ENST00000465073 A0A1B0GVY2 172 aa16.28■□□□□ 0.2
USP42-205ENST00000465073 SNRPGP15A8MWD9 76 aa16.28■□□□□ 0.2
USP42-205ENST00000465073 ANXA3P12429 323 aa16.28■□□□□ 0.2
USP42-205ENST00000465073 ALDH3B2P48448 385 aa16.28■□□□□ 0.2
USP42-205ENST00000465073 FXYD7P58549 80 aa16.28■□□□□ 0.2
USP42-205ENST00000465073 DEFB1P60022 68 aa16.28■□□□□ 0.2
USP42-205ENST00000465073 OR1S1Q8NH92 325 aa16.28■□□□□ 0.2
USP42-205ENST00000465073 COQ8AQ8NI60 647 aa16.28■□□□□ 0.2
USP42-205ENST00000465073 MRPS26Q9BYN8 205 aaKnown RBP16.28■□□□□ 0.2
USP42-205ENST00000465073 IGHV3OR16-12A0A075B7B8 117 aa16.27■□□□□ 0.19
USP42-205ENST00000465073 SOCS3O14543 225 aa16.27■□□□□ 0.19
USP42-205ENST00000465073 LYZP61626 148 aa16.27■□□□□ 0.19
USP42-205ENST00000465073 ZNF709Q8N972 641 aa16.27■□□□□ 0.19
USP42-205ENST00000465073 OR4B1Q8NGF8 309 aa16.27■□□□□ 0.19
USP42-205ENST00000465073 MCUBQ9NWR8 336 aa16.27■□□□□ 0.19
USP42-205ENST00000465073 CCDC59Q9P031 241 aaKnown RBP16.26■□□□□ 0.19
USP42-205ENST00000465073 M0R2N4 97 aa16.25■□□□□ 0.19
USP42-205ENST00000465073 ISLRO14498 428 aa16.25■□□□□ 0.19
USP42-205ENST00000465073 ZNF79Q15937 498 aa16.25■□□□□ 0.19
USP42-205ENST00000465073 LGALS9BQ3B8N2 356 aa16.25■□□□□ 0.19
USP42-205ENST00000465073 SAMD13Q5VXD3 122 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms