RNA–Protein interactions for RNA: ENST00000463631.1

HMGN1-209, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-209ENST00000463631 RNF125Q96EQ8 232 aa12.26□□□□□ -0.45
HMGN1-209ENST00000463631 CACNG5Q9UF02 275 aa12.26□□□□□ -0.45
HMGN1-209ENST00000463631 CACFD1Q9UGQ2 172 aa12.26□□□□□ -0.45
HMGN1-209ENST00000463631 IGHV3OR16-12A0A075B7B8 117 aa12.25□□□□□ -0.45
HMGN1-209ENST00000463631 HPGDSO60760 199 aa12.25□□□□□ -0.45
HMGN1-209ENST00000463631 OR5AC1P0C628 307 aa12.25□□□□□ -0.45
HMGN1-209ENST00000463631 PSG1P11464 419 aa12.25□□□□□ -0.45
HMGN1-209ENST00000463631 PAX9P55771 341 aa12.25□□□□□ -0.45
HMGN1-209ENST00000463631 NMSQ5H8A3 153 aa12.25□□□□□ -0.45
HMGN1-209ENST00000463631 OR8G2PQ6IF36 304 aa12.25□□□□□ -0.45
HMGN1-209ENST00000463631 NOXA1Q86UR1 476 aa12.25□□□□□ -0.45
HMGN1-209ENST00000463631 OR4D10Q8NGI6 311 aa12.25□□□□□ -0.45
HMGN1-209ENST00000463631 OR51G1Q8NGK1 321 aa12.25□□□□□ -0.45
HMGN1-209ENST00000463631 OR52I2Q8NH67 350 aa12.25□□□□□ -0.45
HMGN1-209ENST00000463631 GLYATL2Q8WU03 294 aa12.25□□□□□ -0.45
HMGN1-209ENST00000463631 ACY3Q96HD9 319 aa12.25□□□□□ -0.45
HMGN1-209ENST00000463631 VCX3AQ9NNX9 186 aa12.25□□□□□ -0.45
HMGN1-209ENST00000463631 PFDN2Q9UHV9 154 aa12.25□□□□□ -0.45
HMGN1-209ENST00000463631 SOCS3O14543 225 aa12.24□□□□□ -0.45
HMGN1-209ENST00000463631 DEFB1P60022 68 aa12.24□□□□□ -0.45
HMGN1-209ENST00000463631 NCS1P62166 190 aa12.24□□□□□ -0.45
HMGN1-209ENST00000463631 TMEM88Q6PEY1 159 aa12.24□□□□□ -0.45
HMGN1-209ENST00000463631 MARCH1Q8TCQ1 289 aa12.24□□□□□ -0.45
HMGN1-209ENST00000463631 WDR12Q9GZL7 423 aaKnown RBP12.24□□□□□ -0.45
HMGN1-209ENST00000463631 GOLT1BQ9Y3E0 138 aa12.24□□□□□ -0.45
HMGN1-209ENST00000463631 CEBPZOSA8MTT3 80 aa12.23□□□□□ -0.45
HMGN1-209ENST00000463631 IGKV3-20P01619 116 aa12.23□□□□□ -0.45
HMGN1-209ENST00000463631 HBE1P02100 147 aa12.23□□□□□ -0.45
HMGN1-209ENST00000463631 ID1P41134 155 aa12.23□□□□□ -0.45
HMGN1-209ENST00000463631 ALDH3B2P48448 385 aa12.23□□□□□ -0.45
HMGN1-209ENST00000463631 FXYD7P58549 80 aa12.23□□□□□ -0.45
HMGN1-209ENST00000463631 RNASE12Q5GAN4 147 aaKnown RBP12.23□□□□□ -0.45
HMGN1-209ENST00000463631 C1orf194Q5T5A4 169 aa12.23□□□□□ -0.45
HMGN1-209ENST00000463631 C15orf53Q8NAA6 179 aa12.23□□□□□ -0.45
HMGN1-209ENST00000463631 SLC35B3Q9H1N7 401 aa12.23□□□□□ -0.45
HMGN1-209ENST00000463631 NAA60Q9H7X0 242 aa12.23□□□□□ -0.45
HMGN1-209ENST00000463631 PLA2G2EQ9NZK7 142 aa12.23□□□□□ -0.45
HMGN1-209ENST00000463631 YTHDF2Q9Y5A9 579 aaKnown RBP12.23□□□□□ -0.45
HMGN1-209ENST00000463631 TEX13DA0A0J9YY54 714 aaPredicted RBP12.22□□□□□ -0.45
HMGN1-209ENST00000463631 LOC102723971A0A1B0GUV8 181 aa12.22□□□□□ -0.45
HMGN1-209ENST00000463631 ISLRO14498 428 aa12.22□□□□□ -0.45
HMGN1-209ENST00000463631 HTN3P15516 51 aa12.22□□□□□ -0.45
HMGN1-209ENST00000463631 RORCP51449 518 aa12.22□□□□□ -0.45
HMGN1-209ENST00000463631 TAS2R19P59542 299 aa12.22□□□□□ -0.45
HMGN1-209ENST00000463631 SUPT4H1P63272 117 aaKnown RBP12.22□□□□□ -0.45
HMGN1-209ENST00000463631 PSG9Q00887 426 aa12.22□□□□□ -0.45
HMGN1-209ENST00000463631 SURF2Q15527 256 aaPredicted RBP12.22□□□□□ -0.45
HMGN1-209ENST00000463631 SAMD13Q5VXD3 122 aa12.22□□□□□ -0.45
HMGN1-209ENST00000463631 SELENOHQ8IZQ5 122 aaKnown RBP12.22□□□□□ -0.45
HMGN1-209ENST00000463631 C1orf158Q8N1D5 194 aa12.22□□□□□ -0.45
HMGN1-209ENST00000463631 TMEM229BQ8NBD8 167 aa12.22□□□□□ -0.45
HMGN1-209ENST00000463631 COQ8AQ8NI60 647 aa12.22□□□□□ -0.45
HMGN1-209ENST00000463631 GPR146Q96CH1 333 aa12.22□□□□□ -0.45
HMGN1-209ENST00000463631 A8MTW9 85 aa12.21□□□□□ -0.45
HMGN1-209ENST00000463631 RAB3DO95716 219 aa12.21□□□□□ -0.45
HMGN1-209ENST00000463631 RRN3P1Q2M238 152 aa12.21□□□□□ -0.45
HMGN1-209ENST00000463631 SCGB2B2Q4G0G5 96 aa12.21□□□□□ -0.45
HMGN1-209ENST00000463631 GPR107Q5VW38 600 aa12.21□□□□□ -0.45
HMGN1-209ENST00000463631 TMEM268Q5VZI3 342 aa12.21□□□□□ -0.45
HMGN1-209ENST00000463631 OR4B1Q8NGF8 309 aa12.21□□□□□ -0.45
HMGN1-209ENST00000463631 C15orf40Q8WUR7 153 aa12.21□□□□□ -0.45
HMGN1-209ENST00000463631 LINC00052Q96N35 136 aa12.21□□□□□ -0.45
HMGN1-209ENST00000463631 RTBDNQ9BSG5 229 aaPredicted RBP12.21□□□□□ -0.45
HMGN1-209ENST00000463631 C14orf166Q9Y224 244 aaKnown RBP12.21□□□□□ -0.45
HMGN1-209ENST00000463631 TMEM56-RWDD3S4R434 201 aa12.21□□□□□ -0.45
HMGN1-209ENST00000463631 LRP1BQ9NZR2 4599 aa12.21□□□□□ -0.45
HMGN1-209ENST00000463631 A0A087WXM4 84 aa12.2□□□□□ -0.46
HMGN1-209ENST00000463631 A0A0J9YX75 114 aa12.2□□□□□ -0.46
HMGN1-209ENST00000463631 C16orf90A8MZG2 172 aa12.2□□□□□ -0.46
HMGN1-209ENST00000463631 FAM25AB3EWG3 89 aa12.2□□□□□ -0.46
HMGN1-209ENST00000463631 FAM25CB3EWG5 89 aa12.2□□□□□ -0.46
HMGN1-209ENST00000463631 FAM25GB3EWG6 89 aa12.2□□□□□ -0.46
HMGN1-209ENST00000463631 TNFAIP8O95379 198 aa12.2□□□□□ -0.46
HMGN1-209ENST00000463631 VBP1P61758 197 aa12.2□□□□□ -0.46
HMGN1-209ENST00000463631 DAD1P61803 113 aa12.2□□□□□ -0.46
HMGN1-209ENST00000463631 SSBP1Q04837 148 aaKnown RBP12.2□□□□□ -0.46
HMGN1-209ENST00000463631 MEF2DQ14814 521 aa12.2□□□□□ -0.46
HMGN1-209ENST00000463631 FAM78BQ5VT40 261 aa12.2□□□□□ -0.46
HMGN1-209ENST00000463631 STEAP1BQ6NZ63 245 aa12.2□□□□□ -0.46
HMGN1-209ENST00000463631 MZT2AQ6P582 158 aa12.2□□□□□ -0.46
HMGN1-209ENST00000463631 PBDC1Q9BVG4 233 aa12.2□□□□□ -0.46
HMGN1-209ENST00000463631 FUNDC2Q9BWH2 189 aa12.2□□□□□ -0.46
HMGN1-209ENST00000463631 TMED3Q9Y3Q3 217 aa12.2□□□□□ -0.46
HMGN1-209ENST00000463631 U3KQ87 197 aa12.2□□□□□ -0.46
HMGN1-209ENST00000463631 IGKV1D-37A0A075B6S9 117 aa12.19□□□□□ -0.46
HMGN1-209ENST00000463631 CRYM-AS1A6NIL9 109 aa12.19□□□□□ -0.46
HMGN1-209ENST00000463631 SULT1A3P0DMM9 295 aa12.19□□□□□ -0.46
HMGN1-209ENST00000463631 SULT1A4P0DMN0 295 aa12.19□□□□□ -0.46
HMGN1-209ENST00000463631 ATP5IP56385 69 aaPredicted RBP12.19□□□□□ -0.46
HMGN1-209ENST00000463631 TNP2Q05952 138 aa12.19□□□□□ -0.46
HMGN1-209ENST00000463631 KLF9Q13886 244 aaPredicted RBP12.19□□□□□ -0.46
HMGN1-209ENST00000463631 EBLN2Q6P2I7 272 aa12.19□□□□□ -0.46
HMGN1-209ENST00000463631 AP3S1Q92572 193 aa12.19□□□□□ -0.46
HMGN1-209ENST00000463631 IL22RA2Q969J5 263 aa12.19□□□□□ -0.46
HMGN1-209ENST00000463631 C7orf50Q9BRJ6 194 aaKnown RBP12.19□□□□□ -0.46
HMGN1-209ENST00000463631 EXTL2Q9UBQ6 330 aa12.19□□□□□ -0.46
HMGN1-209ENST00000463631 HSPB7Q9UBY9 170 aa12.19□□□□□ -0.46
HMGN1-209ENST00000463631 FABP1P07148 127 aa12.18□□□□□ -0.46
HMGN1-209ENST00000463631 MEOX2P50222 304 aa12.18□□□□□ -0.46
HMGN1-209ENST00000463631 LGI3Q8N145 548 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms