RNA–Protein interactions for RNA: ENST00000460616.5

SSR4-206, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,482 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-206ENST00000460616 FOXE3Q13461 319 aa12.54□□□□□ -0.4
SSR4-206ENST00000460616 ABHD17BQ5VST6 288 aa12.54□□□□□ -0.4
SSR4-206ENST00000460616 C2orf91Q6ZV80 131 aa12.54□□□□□ -0.4
SSR4-206ENST00000460616 AP1S3Q96PC3 154 aa12.54□□□□□ -0.4
SSR4-206ENST00000460616 NDFIP1Q9BT67 221 aa12.54□□□□□ -0.4
SSR4-206ENST00000460616 DKK4Q9UBT3 224 aa12.54□□□□□ -0.4
SSR4-206ENST00000460616 TEX50A0A1B0GTY4 177 aa12.53□□□□□ -0.4
SSR4-206ENST00000460616 ZNF137PP52743 207 aa12.53□□□□□ -0.4
SSR4-206ENST00000460616 C10orf113Q5VZT2 155 aa12.53□□□□□ -0.4
SSR4-206ENST00000460616 UFSP1Q6NVU6 142 aa12.53□□□□□ -0.4
SSR4-206ENST00000460616 GTSF1Q8WW33 167 aa12.53□□□□□ -0.4
SSR4-206ENST00000460616 ZNF430Q9H8G1 570 aaPredicted RBP12.53□□□□□ -0.4
SSR4-206ENST00000460616 TIMM8BQ9Y5J9 83 aaPredicted RBP12.53□□□□□ -0.4
SSR4-206ENST00000460616 SOX21Q9Y651 276 aaPredicted RBP12.53□□□□□ -0.4
SSR4-206ENST00000460616 IGKV1D-17A0A075B6S4 117 aa12.53□□□□□ -0.4
SSR4-206ENST00000460616 UPK2O00526 184 aa12.53□□□□□ -0.4
SSR4-206ENST00000460616 FABP6P51161 128 aa12.53□□□□□ -0.4
SSR4-206ENST00000460616 CLEC2AQ6UVW9 174 aa12.53□□□□□ -0.4
SSR4-206ENST00000460616 CALYQ9NYX4 217 aa12.53□□□□□ -0.4
SSR4-206ENST00000460616 LYZL6O75951 148 aa12.52□□□□□ -0.4
SSR4-206ENST00000460616 RNASE2P10153 161 aaKnown RBP12.52□□□□□ -0.4
SSR4-206ENST00000460616 POU2AF1Q16633 256 aa12.52□□□□□ -0.4
SSR4-206ENST00000460616 LINC01545Q5VT33 79 aa12.52□□□□□ -0.4
SSR4-206ENST00000460616 WFDC8Q8IUA0 241 aa12.52□□□□□ -0.4
SSR4-206ENST00000460616 OR1L8Q8NGR8 309 aa12.52□□□□□ -0.4
SSR4-206ENST00000460616 PPP1R35Q8TAP8 253 aa12.52□□□□□ -0.4
SSR4-206ENST00000460616 ZNF714Q96N38 554 aa12.52□□□□□ -0.4
SSR4-206ENST00000460616 GPR82Q96P67 336 aa12.52□□□□□ -0.4
SSR4-206ENST00000460616 EPDR1Q9UM22 224 aa12.52□□□□□ -0.4
SSR4-206ENST00000460616 DSPP15924 2871 aaKnown RBP12.52□□□□□ -0.4
SSR4-206ENST00000460616 CHEK1O14757 476 aa12.52□□□□□ -0.41
SSR4-206ENST00000460616 UQCRFS1P47985 274 aa12.52□□□□□ -0.41
SSR4-206ENST00000460616 LINC00322Q6ZN03 302 aaPredicted RBP12.52□□□□□ -0.41
SSR4-206ENST00000460616 ZNRF1Q8ND25 227 aa12.52□□□□□ -0.41
SSR4-206ENST00000460616 FXYD5Q96DB9 178 aa12.52□□□□□ -0.41
SSR4-206ENST00000460616 TMUB1Q9BVT8 246 aa12.52□□□□□ -0.41
SSR4-206ENST00000460616 PRSS22Q9GZN4 317 aa12.52□□□□□ -0.41
SSR4-206ENST00000460616 P01737 135 aa12.51□□□□□ -0.41
SSR4-206ENST00000460616 IGHV1-2P23083 117 aa12.51□□□□□ -0.41
SSR4-206ENST00000460616 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.51□□□□□ -0.41
SSR4-206ENST00000460616 OR10W1Q8NGF6 305 aa12.51□□□□□ -0.41
SSR4-206ENST00000460616 OR1L4Q8NGR5 311 aa12.51□□□□□ -0.41
SSR4-206ENST00000460616 CACNG8Q8WXS5 425 aa12.51□□□□□ -0.41
SSR4-206ENST00000460616 ADTRPQ96IZ2 230 aa12.51□□□□□ -0.41
SSR4-206ENST00000460616 SELENOKQ9Y6D0 94 aa12.51□□□□□ -0.41
SSR4-206ENST00000460616 C9orf118A6NHY6 69 aa12.51□□□□□ -0.41
SSR4-206ENST00000460616 SLC25A5P05141 298 aaKnown RBP12.51□□□□□ -0.41
SSR4-206ENST00000460616 PATE2Q6UY27 113 aa12.51□□□□□ -0.41
SSR4-206ENST00000460616 BSNQ9UPA5 3926 aa12.5□□□□□ -0.41
SSR4-206ENST00000460616 MOSP00540 346 aa12.5□□□□□ -0.41
SSR4-206ENST00000460616 INO80CQ6PI98 192 aaPredicted RBP12.5□□□□□ -0.41
SSR4-206ENST00000460616 RBPMS2Q6ZRY4 209 aaKnown RBP12.5□□□□□ -0.41
SSR4-206ENST00000460616 MLST8Q9BVC4 326 aa12.5□□□□□ -0.41
SSR4-206ENST00000460616 ABI3Q9P2A4 366 aa12.5□□□□□ -0.41
SSR4-206ENST00000460616 KLF12Q9Y4X4 402 aa12.5□□□□□ -0.41
SSR4-206ENST00000460616 IGHV3OR15-7A0A075B7D8 119 aa12.5□□□□□ -0.41
SSR4-206ENST00000460616 PGPA6NDG6 321 aa12.5□□□□□ -0.41
SSR4-206ENST00000460616 SRRM4A7MD48 611 aaKnown RBP12.5□□□□□ -0.41
SSR4-206ENST00000460616 H3BRM9 83 aa12.5□□□□□ -0.41
SSR4-206ENST00000460616 AGFG2O95081 481 aa12.5□□□□□ -0.41
SSR4-206ENST00000460616 CSN3P07498 182 aa12.5□□□□□ -0.41
SSR4-206ENST00000460616 MYCNOSP40205 109 aa12.5□□□□□ -0.41
SSR4-206ENST00000460616 SSBP2P81877 361 aaPredicted RBP12.5□□□□□ -0.41
SSR4-206ENST00000460616 CT83Q5H943 113 aa12.5□□□□□ -0.41
SSR4-206ENST00000460616 PDPNQ86YL7 162 aa12.5□□□□□ -0.41
SSR4-206ENST00000460616 DAZAP1Q96EP5 407 aaKnown RBP12.5□□□□□ -0.41
SSR4-206ENST00000460616 A6NDN8 102 aa12.49□□□□□ -0.41
SSR4-206ENST00000460616 IGKV1-16P04430 117 aa12.49□□□□□ -0.41
SSR4-206ENST00000460616 TMEM177Q53S58 311 aa12.49□□□□□ -0.41
SSR4-206ENST00000460616 C5orf17Q8NAS9 161 aa12.49□□□□□ -0.41
SSR4-206ENST00000460616 BLNKQ8WV28 456 aa12.49□□□□□ -0.41
SSR4-206ENST00000460616 NEU4Q8WWR8 484 aaPredicted RBP12.49□□□□□ -0.41
SSR4-206ENST00000460616 PIEZO2Q9H5I5 2752 aa12.49□□□□□ -0.41
SSR4-206ENST00000460616 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.49□□□□□ -0.41
SSR4-206ENST00000460616 H3BUT2 72 aa12.49□□□□□ -0.41
SSR4-206ENST00000460616 K7EM74 188 aa12.49□□□□□ -0.41
SSR4-206ENST00000460616 K7ENP7 123 aa12.49□□□□□ -0.41
SSR4-206ENST00000460616 C17orf58Q2M2W7 97 aa12.49□□□□□ -0.41
SSR4-206ENST00000460616 GFRA4Q9GZZ7 299 aa12.49□□□□□ -0.41
SSR4-206ENST00000460616 DEFB127Q9H1M4 99 aa12.49□□□□□ -0.41
SSR4-206ENST00000460616 CGB3P0DN86 165 aa12.48□□□□□ -0.41
SSR4-206ENST00000460616 CGB7P0DN87 165 aa12.48□□□□□ -0.41
SSR4-206ENST00000460616 DNAJC13O75165 2243 aa12.48□□□□□ -0.41
SSR4-206ENST00000460616 C19orf71A6NCJ1 209 aa12.48□□□□□ -0.41
SSR4-206ENST00000460616 K7EP34 96 aa12.48□□□□□ -0.41
SSR4-206ENST00000460616 PLAUP00749 431 aa12.48□□□□□ -0.41
SSR4-206ENST00000460616 CD46P15529 392 aa12.48□□□□□ -0.41
SSR4-206ENST00000460616 LINC00305Q7Z4B0 112 aa12.48□□□□□ -0.41
SSR4-206ENST00000460616 OR2Z1Q8NG97 314 aa12.48□□□□□ -0.41
SSR4-206ENST00000460616 JMJD8Q96S16 334 aa12.48□□□□□ -0.41
SSR4-206ENST00000460616 SRRM5B3KS81 715 aa12.47□□□□□ -0.41
SSR4-206ENST00000460616 CEACAM4O75871 244 aa12.47□□□□□ -0.41
SSR4-206ENST00000460616 FSTL3O95633 263 aa12.47□□□□□ -0.41
SSR4-206ENST00000460616 MEOX1P50221 254 aa12.47□□□□□ -0.41
SSR4-206ENST00000460616 ERHP84090 104 aaKnown RBP12.47□□□□□ -0.41
SSR4-206ENST00000460616 LHFPL4Q7Z7J7 247 aa12.47□□□□□ -0.41
SSR4-206ENST00000460616 NPIPB3Q92617 1050 aa12.47□□□□□ -0.41
SSR4-206ENST00000460616 ZNF747Q9BV97 191 aa12.47□□□□□ -0.41
SSR4-206ENST00000460616 RABAC1Q9UI14 185 aa12.47□□□□□ -0.41
SSR4-206ENST00000460616 PRRC2CQ9Y520 2896 aaKnown RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms