RNA–Protein interactions for RNA: ENST00000460509.1

VBP1-202, Transcript of VHL binding protein 1, humanhuman

TSL 2

Gene VBP1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-202ENST00000460509 MEIS3P1A6NDR6 274 aa1.51□□□□□ -2.17
VBP1-202ENST00000460509 C1orf196B1AJZ1 125 aa1.51□□□□□ -2.17
VBP1-202ENST00000460509 KPNA4O00629 521 aaPredicted RBP1.51□□□□□ -2.17
VBP1-202ENST00000460509 TAX1BP3O14907 124 aa1.51□□□□□ -2.17
VBP1-202ENST00000460509 ARPC5O15511 151 aa1.51□□□□□ -2.17
VBP1-202ENST00000460509 DHFRP00374 187 aa1.51□□□□□ -2.17
VBP1-202ENST00000460509 TRGC2P03986 189 aa1.51□□□□□ -2.17
VBP1-202ENST00000460509 DEFA4P12838 97 aa1.51□□□□□ -2.17
VBP1-202ENST00000460509 S100A4P26447 101 aaKnown RBP1.51□□□□□ -2.17
VBP1-202ENST00000460509 INSL3P51460 131 aa1.51□□□□□ -2.17
VBP1-202ENST00000460509 EMP1P54849 157 aa1.51□□□□□ -2.17
VBP1-202ENST00000460509 FAM27BQ5VT28 67 aa1.51□□□□□ -2.17
VBP1-202ENST00000460509 CLVS1Q8IUQ0 354 aaPredicted RBP1.51□□□□□ -2.17
VBP1-202ENST00000460509 HIST3H2BBQ8N257 126 aa1.51□□□□□ -2.17
VBP1-202ENST00000460509 SIGLECL1Q8N7X8 197 aa1.51□□□□□ -2.17
VBP1-202ENST00000460509 STAG3L4Q8TBR4 150 aa1.51□□□□□ -2.17
VBP1-202ENST00000460509 C11orf40Q8WZ69 217 aa1.51□□□□□ -2.17
VBP1-202ENST00000460509 CARD19Q96LW7 228 aa1.51□□□□□ -2.17
VBP1-202ENST00000460509 GPX7Q96SL4 187 aaPredicted RBP1.51□□□□□ -2.17
VBP1-202ENST00000460509 OR2J1Q9GZK6 312 aa1.51□□□□□ -2.17
VBP1-202ENST00000460509 NAT8Q9UHE5 227 aa1.51□□□□□ -2.17
VBP1-202ENST00000460509 UBR2Q8IWV8 1755 aa1.51□□□□□ -2.17
VBP1-202ENST00000460509 DENND4CQ5VZ89 1909 aa1.5□□□□□ -2.17
VBP1-202ENST00000460509 ZNF106Q9H2Y7 1883 aaKnown RBP1.5□□□□□ -2.17
VBP1-202ENST00000460509 ECM29Q5VYK3 1845 aa1.5□□□□□ -2.17
VBP1-202ENST00000460509 HELZ2Q9BYK8 2649 aaKnown RBP1.5□□□□□ -2.17
VBP1-202ENST00000460509 A0A087X0T9 212 aa1.5□□□□□ -2.17
VBP1-202ENST00000460509 HMSDA8MTL9 139 aa1.5□□□□□ -2.17
VBP1-202ENST00000460509 PFDN1O60925 122 aa1.5□□□□□ -2.17
VBP1-202ENST00000460509 C1QCP02747 245 aa1.5□□□□□ -2.17
VBP1-202ENST00000460509 NFYAP23511 347 aaPredicted RBP1.5□□□□□ -2.17
VBP1-202ENST00000460509 POLR2HP52434 150 aaKnown RBP1.5□□□□□ -2.17
VBP1-202ENST00000460509 BPIFA4PQ86YQ2 179 aa1.5□□□□□ -2.17
VBP1-202ENST00000460509 PRR15Q8IV56 129 aa1.5□□□□□ -2.17
VBP1-202ENST00000460509 DNAJC9Q8WXX5 260 aa1.5□□□□□ -2.17
VBP1-202ENST00000460509 CCDC115Q96NT0 180 aa1.5□□□□□ -2.17
VBP1-202ENST00000460509 AIF1LQ9BQI0 150 aa1.5□□□□□ -2.17
VBP1-202ENST00000460509 CST9LQ9H4G1 147 aa1.5□□□□□ -2.17
VBP1-202ENST00000460509 ASB4Q9Y574 426 aa1.5□□□□□ -2.17
VBP1-202ENST00000460509 RIC1Q4ADV7 1423 aa1.49□□□□□ -2.17
VBP1-202ENST00000460509 STRCQ7RTU9 1775 aa1.49□□□□□ -2.17
VBP1-202ENST00000460509 RIMBP3CA6NJZ7 1639 aa1.49□□□□□ -2.17
VBP1-202ENST00000460509 RIMBP3BA6NNM3 1639 aa1.49□□□□□ -2.17
VBP1-202ENST00000460509 SMARCA4P51532 1647 aa1.49□□□□□ -2.17
VBP1-202ENST00000460509 RIMBP3Q9UFD9 1639 aa1.49□□□□□ -2.17
VBP1-202ENST00000460509 ZFHX2Q9C0A1 2572 aaPredicted RBP1.49□□□□□ -2.17
VBP1-202ENST00000460509 MYH3P11055 1940 aa1.49□□□□□ -2.17
VBP1-202ENST00000460509 A0A087WX48 190 aa1.49□□□□□ -2.17
VBP1-202ENST00000460509 TRBV10-2A0A0K0K1G8 114 aa1.49□□□□□ -2.17
VBP1-202ENST00000460509 TRDV1A0A1B0GX56 115 aa1.49□□□□□ -2.17
VBP1-202ENST00000460509 TLCD2A6NGC4 264 aa1.49□□□□□ -2.17
VBP1-202ENST00000460509 H7BYZ3 331 aa1.49□□□□□ -2.17
VBP1-202ENST00000460509 H7C2G1 150 aa1.49□□□□□ -2.17
VBP1-202ENST00000460509 TMEM256-PLSCR3K7ERE1 68 aa1.49□□□□□ -2.17
VBP1-202ENST00000460509 SLC22A1O15245 554 aa1.49□□□□□ -2.17
VBP1-202ENST00000460509 GGCTO75223 188 aaKnown RBP1.49□□□□□ -2.17
VBP1-202ENST00000460509 ZNF737O75373 536 aa1.49□□□□□ -2.17
VBP1-202ENST00000460509 RPL7P18124 248 aaKnown RBP1.49□□□□□ -2.17
VBP1-202ENST00000460509 OGNP20774 298 aaKnown RBP1.49□□□□□ -2.17
VBP1-202ENST00000460509 RPS3P23396 243 aaKnown RBP eCLIP1.49□□□□□ -2.173e-6■□□□□ 10
VBP1-202ENST00000460509 FXYD2P54710 66 aa1.49□□□□□ -2.17
VBP1-202ENST00000460509 FKBP1CQ5VVH2 108 aa1.49□□□□□ -2.17
VBP1-202ENST00000460509 TRAPPC6BQ86SZ2 158 aa1.49□□□□□ -2.17
VBP1-202ENST00000460509 ANGPTL5Q86XS5 388 aa1.49□□□□□ -2.17
VBP1-202ENST00000460509 TMEM86AQ8N2M4 240 aa1.49□□□□□ -2.17
VBP1-202ENST00000460509 OR8D4Q8NGM9 314 aa1.49□□□□□ -2.17
VBP1-202ENST00000460509 CANT1Q8WVQ1 401 aa1.49□□□□□ -2.17
VBP1-202ENST00000460509 HIST1H2BLQ99880 126 aa1.49□□□□□ -2.17
VBP1-202ENST00000460509 CCDC32Q9BV29 185 aa1.49□□□□□ -2.17
VBP1-202ENST00000460509 OSTCQ9NRP0 149 aa1.49□□□□□ -2.17
VBP1-202ENST00000460509 JPT1Q9UK76 154 aa1.49□□□□□ -2.17
VBP1-202ENST00000460509 EPDR1Q9UM22 224 aa1.49□□□□□ -2.17
VBP1-202ENST00000460509 FN1P02751 2386 aaKnown RBP1.49□□□□□ -2.17
VBP1-202ENST00000460509 CUL9Q8IWT3 2517 aa1.48□□□□□ -2.17
VBP1-202ENST00000460509 PIK3C2AO00443 1686 aa1.48□□□□□ -2.17
VBP1-202ENST00000460509 PEG3Q9GZU2 1588 aa1.48□□□□□ -2.17
VBP1-202ENST00000460509 IGHV1-18A0A0C4DH31 117 aa1.48□□□□□ -2.17
VBP1-202ENST00000460509 FAM107AO95990 144 aa1.48□□□□□ -2.17
VBP1-202ENST00000460509 SHBGP04278 402 aa1.48□□□□□ -2.17
VBP1-202ENST00000460509 HMGN1P05114 100 aa1.48□□□□□ -2.17
VBP1-202ENST00000460509 ZNF705BP0CI00 300 aaPredicted RBP1.48□□□□□ -2.17
VBP1-202ENST00000460509 COX6A1P12074 109 aa1.48□□□□□ -2.17
VBP1-202ENST00000460509 GPX2P18283 190 aa1.48□□□□□ -2.17
VBP1-202ENST00000460509 NFYBP25208 207 aa1.48□□□□□ -2.17
VBP1-202ENST00000460509 UBE2BP63146 152 aa1.48□□□□□ -2.17
VBP1-202ENST00000460509 BCL2L15Q5TBC7 163 aa1.48□□□□□ -2.17
VBP1-202ENST00000460509 C22orf39Q6P5X5 142 aa1.48□□□□□ -2.17
VBP1-202ENST00000460509 OR9Q1Q8NGQ5 310 aa1.48□□□□□ -2.17
VBP1-202ENST00000460509 TEX37Q96LM6 180 aa1.48□□□□□ -2.17
VBP1-202ENST00000460509 HSPB9Q9BQS6 159 aa1.48□□□□□ -2.17
VBP1-202ENST00000460509 C6orf62Q9GZU0 229 aaPredicted RBP1.48□□□□□ -2.17
VBP1-202ENST00000460509 TMEM126AQ9H061 195 aa1.48□□□□□ -2.17
VBP1-202ENST00000460509 SPANXA1Q9NS26 97 aa1.48□□□□□ -2.17
VBP1-202ENST00000460509 MED11Q9P086 117 aa1.48□□□□□ -2.17
VBP1-202ENST00000460509 CKLFQ9UBR5 152 aa1.48□□□□□ -2.17
VBP1-202ENST00000460509 LAMTOR3Q9UHA4 124 aa1.48□□□□□ -2.17
VBP1-202ENST00000460509 MED31Q9Y3C7 131 aa1.48□□□□□ -2.17
VBP1-202ENST00000460509 NUBP2Q9Y5Y2 271 aa1.48□□□□□ -2.17
VBP1-202ENST00000460509 SCN10AQ9Y5Y9 1956 aa1.48□□□□□ -2.17
VBP1-202ENST00000460509 ARHGEF28Q8N1W1 1705 aaKnown RBP1.48□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms