RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 M0R2P5 195 aa4.13□□□□□ -1.75
PCDH9-203ENST00000456367 LGALS1P09382 135 aaKnown RBP4.13□□□□□ -1.75
PCDH9-203ENST00000456367 KLRD1Q13241 179 aa4.13□□□□□ -1.75
PCDH9-203ENST00000456367 PCOLCEQ15113 449 aa4.13□□□□□ -1.75
PCDH9-203ENST00000456367 VWC2Q2TAL6 325 aa4.13□□□□□ -1.75
PCDH9-203ENST00000456367 MEIG1Q5JSS6 88 aa4.13□□□□□ -1.75
PCDH9-203ENST00000456367 SPINK14Q6IE38 97 aa4.13□□□□□ -1.75
PCDH9-203ENST00000456367 ZNF329Q86UD4 541 aa4.13□□□□□ -1.75
PCDH9-203ENST00000456367 ITLN1Q8WWA0 313 aa4.13□□□□□ -1.75
PCDH9-203ENST00000456367 TMEM74BQ9NUR3 256 aa4.13□□□□□ -1.75
PCDH9-203ENST00000456367 LINC00312Q9Y6C7 94 aa4.13□□□□□ -1.75
PCDH9-203ENST00000456367 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.12□□□□□ -1.75
PCDH9-203ENST00000456367 DENND4AQ7Z401 1863 aa4.12□□□□□ -1.75
PCDH9-203ENST00000456367 IGHV3-21A0A0B4J1V1 117 aa4.12□□□□□ -1.75
PCDH9-203ENST00000456367 FOXI3A8MTJ6 420 aaPredicted RBP4.12□□□□□ -1.75
PCDH9-203ENST00000456367 H0YJW9 148 aa4.12□□□□□ -1.75
PCDH9-203ENST00000456367 INAFM2P0DMQ5 153 aa4.12□□□□□ -1.75
PCDH9-203ENST00000456367 GATA2P23769 480 aaPredicted RBP4.12□□□□□ -1.75
PCDH9-203ENST00000456367 FOXF2Q12947 444 aa4.12□□□□□ -1.75
PCDH9-203ENST00000456367 UTF1Q5T230 341 aa4.12□□□□□ -1.75
PCDH9-203ENST00000456367 SLC22A18ASQ8N1D0 253 aa4.12□□□□□ -1.75
PCDH9-203ENST00000456367 CT55Q8WUE5 264 aa4.12□□□□□ -1.75
PCDH9-203ENST00000456367 TDRD6O60522 2096 aaKnown RBP4.12□□□□□ -1.75
PCDH9-203ENST00000456367 CASP8AP2Q9UKL3 1982 aa4.12□□□□□ -1.75
PCDH9-203ENST00000456367 H3BMM0 161 aa4.12□□□□□ -1.75
PCDH9-203ENST00000456367 IGHV4-39P01824 125 aa4.12□□□□□ -1.75
PCDH9-203ENST00000456367 SAA1P0DJI8 122 aaPredicted RBP4.12□□□□□ -1.75
PCDH9-203ENST00000456367 ARTNQ5T4W7 220 aa4.12□□□□□ -1.75
PCDH9-203ENST00000456367 HAPLN4Q86UW8 402 aa4.12□□□□□ -1.75
PCDH9-203ENST00000456367 WFDC3Q8IUB2 231 aa4.12□□□□□ -1.75
PCDH9-203ENST00000456367 UBE2WQ96B02 151 aa4.12□□□□□ -1.75
PCDH9-203ENST00000456367 H3BTX0 84 aa4.12□□□□□ -1.75
PCDH9-203ENST00000456367 NPPCP23582 126 aa4.12□□□□□ -1.75
PCDH9-203ENST00000456367 YPEL4Q96NS1 127 aa4.12□□□□□ -1.75
PCDH9-203ENST00000456367 MBNL3Q9NUK0 354 aaKnown RBP4.12□□□□□ -1.75
PCDH9-203ENST00000456367 ZSWIM8A7E2V4 1837 aa4.12□□□□□ -1.75
PCDH9-203ENST00000456367 SBF1O95248 1867 aa4.12□□□□□ -1.75
PCDH9-203ENST00000456367 TEX48A0A1B0GUV7 120 aa4.12□□□□□ -1.75
PCDH9-203ENST00000456367 RBMY1BA6NDE4 496 aaKnown RBP4.12□□□□□ -1.75
PCDH9-203ENST00000456367 RBMY1EA6NEQ0 496 aaKnown RBP4.12□□□□□ -1.75
PCDH9-203ENST00000456367 PRR33A8MZF0 331 aa4.12□□□□□ -1.75
PCDH9-203ENST00000456367 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.12□□□□□ -1.75
PCDH9-203ENST00000456367 FOXH1O75593 365 aa4.12□□□□□ -1.75
PCDH9-203ENST00000456367 ACYP1P07311 99 aa4.12□□□□□ -1.75
PCDH9-203ENST00000456367 RBMY1DP0C7P1 496 aaKnown RBP4.12□□□□□ -1.75
PCDH9-203ENST00000456367 RBMY1A1P0DJD3 496 aaKnown RBP4.12□□□□□ -1.75
PCDH9-203ENST00000456367 RBMY1CP0DJD4 496 aa4.12□□□□□ -1.75
PCDH9-203ENST00000456367 IFI27P40305 119 aaPredicted RBP4.12□□□□□ -1.75
PCDH9-203ENST00000456367 LINC01545Q5VT33 79 aa4.12□□□□□ -1.75
PCDH9-203ENST00000456367 EBLN2Q6P2I7 272 aa4.12□□□□□ -1.75
PCDH9-203ENST00000456367 FAM159AQ6UWV7 190 aa4.12□□□□□ -1.75
PCDH9-203ENST00000456367 PPP1R32Q7Z5V6 425 aa4.12□□□□□ -1.75
PCDH9-203ENST00000456367 SHISA5Q8N114 240 aa4.12□□□□□ -1.75
PCDH9-203ENST00000456367 SCRT2Q9NQ03 307 aa4.12□□□□□ -1.75
PCDH9-203ENST00000456367 PLA2G2EQ9NZK7 142 aa4.12□□□□□ -1.75
PCDH9-203ENST00000456367 TP53BP1Q12888 1972 aaPredicted RBP4.11□□□□□ -1.75
PCDH9-203ENST00000456367 C9JAW5 83 aa4.11□□□□□ -1.75
PCDH9-203ENST00000456367 PRSS46E5RG02 174 aa4.11□□□□□ -1.75
PCDH9-203ENST00000456367 F2RL2O00254 374 aa4.11□□□□□ -1.75
PCDH9-203ENST00000456367 IGKV1D-33P01593 117 aa4.11□□□□□ -1.75
PCDH9-203ENST00000456367 IGKV1-33P01594 117 aa4.11□□□□□ -1.75
PCDH9-203ENST00000456367 PDE6HQ13956 83 aa4.11□□□□□ -1.75
PCDH9-203ENST00000456367 RRN3P1Q2M238 152 aa4.11□□□□□ -1.75
PCDH9-203ENST00000456367 CDCP2Q5VXM1 449 aa4.11□□□□□ -1.75
PCDH9-203ENST00000456367 FAM104BQ5XKR9 115 aa4.11□□□□□ -1.75
PCDH9-203ENST00000456367 LYZL1Q6UWQ5 148 aa4.11□□□□□ -1.75
PCDH9-203ENST00000456367 Q86TA4 180 aa4.11□□□□□ -1.75
PCDH9-203ENST00000456367 FBXL15Q9H469 300 aa4.11□□□□□ -1.75
PCDH9-203ENST00000456367 IGKV3D-15A0A087WSY6 115 aa4.11□□□□□ -1.75
PCDH9-203ENST00000456367 AGFG2O95081 481 aa4.11□□□□□ -1.75
PCDH9-203ENST00000456367 EFEMP2O95967 443 aa4.11□□□□□ -1.75
PCDH9-203ENST00000456367 FAM106CPP0CH98 169 aa4.11□□□□□ -1.75
PCDH9-203ENST00000456367 SAA2P0DJI9 122 aaPredicted RBP4.11□□□□□ -1.75
PCDH9-203ENST00000456367 COX6A1P12074 109 aa4.11□□□□□ -1.75
PCDH9-203ENST00000456367 GLRXP35754 106 aa4.11□□□□□ -1.75
PCDH9-203ENST00000456367 FOXI2Q6ZQN5 318 aa4.11□□□□□ -1.75
PCDH9-203ENST00000456367 SLC25A15Q9Y619 301 aa4.11□□□□□ -1.75
PCDH9-203ENST00000456367 GREB1Q4ZG55 1949 aa4.11□□□□□ -1.75
PCDH9-203ENST00000456367 DOCK6Q96HP0 2047 aa4.11□□□□□ -1.75
PCDH9-203ENST00000456367 B5MCH6 92 aa4.11□□□□□ -1.75
PCDH9-203ENST00000456367 ETV2O00321 342 aaPredicted RBP4.11□□□□□ -1.75
PCDH9-203ENST00000456367 CRXO43186 299 aaPredicted RBP4.11□□□□□ -1.75
PCDH9-203ENST00000456367 SPINK2P20155 84 aa4.11□□□□□ -1.75
PCDH9-203ENST00000456367 LOXL3P58215 753 aa4.11□□□□□ -1.75
PCDH9-203ENST00000456367 Q6ZT83 130 aa4.11□□□□□ -1.75
PCDH9-203ENST00000456367 ZIC4Q8N9L1 334 aa4.11□□□□□ -1.75
PCDH9-203ENST00000456367 TMEM75Q8N9X5 138 aa4.11□□□□□ -1.75
PCDH9-203ENST00000456367 TMEM167AQ8TBQ9 72 aa4.11□□□□□ -1.75
PCDH9-203ENST00000456367 EEF1AKMT3Q96AZ1 226 aa4.11□□□□□ -1.75
PCDH9-203ENST00000456367 ZNF747Q9BV97 191 aa4.11□□□□□ -1.75
PCDH9-203ENST00000456367 TRAV21A0A0B4J279 112 aa4.11□□□□□ -1.75
PCDH9-203ENST00000456367 MYMXA0A1B0GTQ4 84 aa4.11□□□□□ -1.75
PCDH9-203ENST00000456367 HLA-DMBP28068 263 aa4.11□□□□□ -1.75
PCDH9-203ENST00000456367 C12orf74Q32Q52 190 aa4.11□□□□□ -1.75
PCDH9-203ENST00000456367 GAGE2AQ6NT46 116 aa4.11□□□□□ -1.75
PCDH9-203ENST00000456367 Q6P435 159 aa4.11□□□□□ -1.75
PCDH9-203ENST00000456367 Q6ZS52 159 aa4.11□□□□□ -1.75
PCDH9-203ENST00000456367 C8orf86Q6ZUL3 223 aa4.11□□□□□ -1.75
PCDH9-203ENST00000456367 Q8N8P6 123 aa4.11□□□□□ -1.75
PCDH9-203ENST00000456367 C21orf62Q9NYP8 219 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms