RNA–Protein interactions for RNA: ENST00000456150.5

CSPG5-203, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 1 (best) BASIC

Gene CSPG5, Length 2,089 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-203ENST00000456150 EPDR1Q9UM22 224 aa16.04■□□□□ 0.16
CSPG5-203ENST00000456150 TEX22C9J3V5 150 aa16.04■□□□□ 0.16
CSPG5-203ENST00000456150 SLC25A5P05141 298 aaKnown RBP16.04■□□□□ 0.16
CSPG5-203ENST00000456150 LBHQ53QV2 105 aaPredicted RBP16.04■□□□□ 0.16
CSPG5-203ENST00000456150 RUSC1-AS1Q66K80 236 aa16.04■□□□□ 0.16
CSPG5-203ENST00000456150 TRAV34A0A0B4J273 112 aa16.03■□□□□ 0.16
CSPG5-203ENST00000456150 SLC35B1P78383 322 aa16.03■□□□□ 0.16
CSPG5-203ENST00000456150 MRPL54Q6P161 138 aaKnown RBP16.03■□□□□ 0.16
CSPG5-203ENST00000456150 GRAMD2BQ96HH9 432 aa16.03■□□□□ 0.16
CSPG5-203ENST00000456150 SAMD10Q9BYL1 202 aa16.03■□□□□ 0.16
CSPG5-203ENST00000456150 GNB4Q9HAV0 340 aa16.03■□□□□ 0.16
CSPG5-203ENST00000456150 ZNF331Q9NQX6 463 aaPredicted RBP16.03■□□□□ 0.16
CSPG5-203ENST00000456150 SMG1Q96Q15 3661 aaKnown RBP16.03■□□□□ 0.16
CSPG5-203ENST00000456150 NBEAP1P0C6P0 100 aa16.03■□□□□ 0.16
CSPG5-203ENST00000456150 APELAP0DMC3 54 aa16.03■□□□□ 0.16
CSPG5-203ENST00000456150 USF2Q15853 346 aaPredicted RBP16.03■□□□□ 0.16
CSPG5-203ENST00000456150 LINC00469Q8N7U9 141 aa16.03■□□□□ 0.16
CSPG5-203ENST00000456150 BLNKQ8WV28 456 aa16.03■□□□□ 0.16
CSPG5-203ENST00000456150 MBD6Q96DN6 1003 aa16.03■□□□□ 0.16
CSPG5-203ENST00000456150 SRSF8Q9BRL6 282 aaKnown RBP16.03■□□□□ 0.16
CSPG5-203ENST00000456150 FBXL15Q9H469 300 aa16.03■□□□□ 0.16
CSPG5-203ENST00000456150 SIAH2O43255 324 aa16.02■□□□□ 0.15
CSPG5-203ENST00000456150 LIPFP07098 398 aa16.02■□□□□ 0.15
CSPG5-203ENST00000456150 BRS3P32247 399 aa16.02■□□□□ 0.15
CSPG5-203ENST00000456150 PRB3Q04118 309 aaPredicted RBP16.02■□□□□ 0.15
CSPG5-203ENST00000456150 C1orf194Q5T5A4 169 aa16.02■□□□□ 0.15
CSPG5-203ENST00000456150 Q6ZWC4 215 aa16.02■□□□□ 0.15
CSPG5-203ENST00000456150 WIPF2Q8TF74 440 aaPredicted RBP16.02■□□□□ 0.15
CSPG5-203ENST00000456150 SRSF12Q8WXF0 261 aaKnown RBP16.02■□□□□ 0.15
CSPG5-203ENST00000456150 POLR3KQ9Y2Y1 108 aaPredicted RBP16.02■□□□□ 0.15
CSPG5-203ENST00000456150 PGPA6NDG6 321 aa16.01■□□□□ 0.15
CSPG5-203ENST00000456150 ZNF705FA8MVS1 300 aaPredicted RBP16.01■□□□□ 0.15
CSPG5-203ENST00000456150 LY6LH3BQJ8 138 aa16.01■□□□□ 0.15
CSPG5-203ENST00000456150 ZNF705DP0CH99 300 aaPredicted RBP16.01■□□□□ 0.15
CSPG5-203ENST00000456150 ZNF705BP0CI00 300 aaPredicted RBP16.01■□□□□ 0.15
CSPG5-203ENST00000456150 HIST1H1EP10412 219 aaKnown RBP16.01■□□□□ 0.15
CSPG5-203ENST00000456150 GNG5P63218 68 aa16.01■□□□□ 0.15
CSPG5-203ENST00000456150 PLGLAQ15195 96 aa16.01■□□□□ 0.15
CSPG5-203ENST00000456150 C19orf35Q6ZS72 473 aa16.01■□□□□ 0.15
CSPG5-203ENST00000456150 NUDT10Q8NFP7 164 aa16.01■□□□□ 0.15
CSPG5-203ENST00000456150 NUDT11Q96G61 164 aa16.01■□□□□ 0.15
CSPG5-203ENST00000456150 HSPB9Q9BQS6 159 aa16.01■□□□□ 0.15
CSPG5-203ENST00000456150 ONECUT1Q9UBC0 465 aa16.01■□□□□ 0.15
CSPG5-203ENST00000456150 KLF12Q9Y4X4 402 aa16.01■□□□□ 0.15
CSPG5-203ENST00000456150 TPRP12270 2363 aaKnown RBP16.01■□□□□ 0.15
CSPG5-203ENST00000456150 IGHV3-21A0A0B4J1V1 117 aa16.01■□□□□ 0.15
CSPG5-203ENST00000456150 CA1P00915 261 aaPredicted RBP16.01■□□□□ 0.15
CSPG5-203ENST00000456150 GP9P14770 177 aa16.01■□□□□ 0.15
CSPG5-203ENST00000456150 SSBP3Q9BWW4 388 aaPredicted RBP16.01■□□□□ 0.15
CSPG5-203ENST00000456150 KIR2DL5BA0A0G2JN68 375 aa16■□□□□ 0.15
CSPG5-203ENST00000456150 KIR2DL5BA0A0G2JPC4 375 aa16■□□□□ 0.15
CSPG5-203ENST00000456150 F2Z2F3 143 aa16■□□□□ 0.15
CSPG5-203ENST00000456150 ADORA2A-AS1P86434 159 aa16■□□□□ 0.15
CSPG5-203ENST00000456150 CDSNQ15517 529 aa16■□□□□ 0.15
CSPG5-203ENST00000456150 KIR2DL5AQ8N109 375 aa16■□□□□ 0.15
CSPG5-203ENST00000456150 SIGLECL1Q8N7X8 197 aa16■□□□□ 0.15
CSPG5-203ENST00000456150 C5orf17Q8NAS9 161 aa16■□□□□ 0.15
CSPG5-203ENST00000456150 LY6G5BQ8NDX9 201 aa16■□□□□ 0.15
CSPG5-203ENST00000456150 FAM168AQ92567 244 aa16■□□□□ 0.15
CSPG5-203ENST00000456150 TBX15Q96SF7 602 aa16■□□□□ 0.15
CSPG5-203ENST00000456150 ATG101Q9BSB4 218 aa16■□□□□ 0.15
CSPG5-203ENST00000456150 HIGD1AQ9Y241 93 aa16■□□□□ 0.15
CSPG5-203ENST00000456150 APCSP02743 223 aa15.99■□□□□ 0.15
CSPG5-203ENST00000456150 GRNP28799 593 aaKnown RBP15.99■□□□□ 0.15
CSPG5-203ENST00000456150 RAB1BQ9H0U4 201 aa15.99■□□□□ 0.15
CSPG5-203ENST00000456150 BMPR1BO00238 502 aa15.99■□□□□ 0.15
CSPG5-203ENST00000456150 KIAA1644Q3SXP7 199 aa15.99■□□□□ 0.15
CSPG5-203ENST00000456150 PRR27Q6MZM9 219 aa15.99■□□□□ 0.15
CSPG5-203ENST00000456150 FMC1Q96HJ9 113 aa15.99■□□□□ 0.15
CSPG5-203ENST00000456150 GPR82Q96P67 336 aa15.99■□□□□ 0.15
CSPG5-203ENST00000456150 C7orf69Q9H7B7 122 aa15.99■□□□□ 0.15
CSPG5-203ENST00000456150 COL6A6A6NMZ7 2263 aa15.99■□□□□ 0.15
CSPG5-203ENST00000456150 KALRNO60229 2985 aa15.98■□□□□ 0.15
CSPG5-203ENST00000456150 ADGRG4Q8IZF6 3080 aa15.98■□□□□ 0.15
CSPG5-203ENST00000456150 ACACBO00763 2458 aa15.98■□□□□ 0.15
CSPG5-203ENST00000456150 SNRPCP09234 159 aaKnown RBP15.98■□□□□ 0.15
CSPG5-203ENST00000456150 IGLC1P0CG04 106 aa15.98■□□□□ 0.15
CSPG5-203ENST00000456150 SRIP30626 198 aa15.98■□□□□ 0.15
CSPG5-203ENST00000456150 TPTE2P1Q5T6R2 138 aa15.98■□□□□ 0.15
CSPG5-203ENST00000456150 TOMM20LQ6UXN7 152 aa15.98■□□□□ 0.15
CSPG5-203ENST00000456150 TSKUQ8WUA8 353 aa15.98■□□□□ 0.15
CSPG5-203ENST00000456150 TIMD4Q96H15 378 aa15.98■□□□□ 0.15
CSPG5-203ENST00000456150 KCNS1Q96KK3 526 aa15.98■□□□□ 0.15
CSPG5-203ENST00000456150 ZNF253O75346 499 aa15.98■□□□□ 0.15
CSPG5-203ENST00000456150 TMEM68Q96MH6 324 aa15.98■□□□□ 0.15
CSPG5-203ENST00000456150 C2orf88Q9BSF0 95 aa15.98■□□□□ 0.15
CSPG5-203ENST00000456150 I3L2K1 104 aa15.97■□□□□ 0.15
CSPG5-203ENST00000456150 HTR1DP28221 377 aa15.97■□□□□ 0.15
CSPG5-203ENST00000456150 LYZP61626 148 aa15.97■□□□□ 0.15
CSPG5-203ENST00000456150 NUP35Q8NFH5 326 aa15.97■□□□□ 0.15
CSPG5-203ENST00000456150 RASL11BQ9BPW5 248 aa15.97■□□□□ 0.15
CSPG5-203ENST00000456150 ZNF586Q9NXT0 402 aa15.97■□□□□ 0.15
CSPG5-203ENST00000456150 TIMM23O14925 209 aa15.96■□□□□ 0.15
CSPG5-203ENST00000456150 CNIH1O95406 144 aa15.96■□□□□ 0.15
CSPG5-203ENST00000456150 TOMM40O96008 361 aa15.96■□□□□ 0.15
CSPG5-203ENST00000456150 GPX1P07203 203 aa15.96■□□□□ 0.15
CSPG5-203ENST00000456150 PSG1P11464 419 aa15.96■□□□□ 0.15
CSPG5-203ENST00000456150 TEX43Q6ZNM6 134 aa15.96■□□□□ 0.15
CSPG5-203ENST00000456150 WNT10AQ9GZT5 417 aa15.96■□□□□ 0.15
CSPG5-203ENST00000456150 Q9H3A6 140 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms