RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 HYLS1Q96M11 299 aa4.06□□□□□ -1.76
HMGB1P4-201ENST00000455362 RCHY1Q96PM5 261 aa4.06□□□□□ -1.76
HMGB1P4-201ENST00000455362 SPIN2AQ99865 258 aa4.06□□□□□ -1.76
HMGB1P4-201ENST00000455362 SPIN2BQ9BPZ2 258 aa4.06□□□□□ -1.76
HMGB1P4-201ENST00000455362 COMMD9Q9P000 198 aa4.06□□□□□ -1.76
HMGB1P4-201ENST00000455362 AMMECR1Q9Y4X0 333 aaPredicted RBP4.06□□□□□ -1.76
HMGB1P4-201ENST00000455362 MINOS1-NBL1R4GNA1 71 aa4.06□□□□□ -1.76
HMGB1P4-201ENST00000455362 IGHV1-3A0A0C4DH29 117 aa4.05□□□□□ -1.76
HMGB1P4-201ENST00000455362 CENPVL3A0A0U1RRI6 287 aa4.05□□□□□ -1.76
HMGB1P4-201ENST00000455362 HMSDA8MTL9 139 aa4.05□□□□□ -1.76
HMGB1P4-201ENST00000455362 OOSP1A8MZH6 123 aa4.05□□□□□ -1.76
HMGB1P4-201ENST00000455362 H7C2Y5 167 aa4.05□□□□□ -1.76
HMGB1P4-201ENST00000455362 HRASP01112 189 aa4.05□□□□□ -1.76
HMGB1P4-201ENST00000455362 APOA2P02652 100 aa4.05□□□□□ -1.76
HMGB1P4-201ENST00000455362 RLN2P04090 185 aa4.05□□□□□ -1.76
HMGB1P4-201ENST00000455362 LEPP41159 167 aa4.05□□□□□ -1.76
HMGB1P4-201ENST00000455362 AKR1C2P52895 323 aa4.05□□□□□ -1.76
HMGB1P4-201ENST00000455362 OR5I1Q13606 314 aa4.05□□□□□ -1.76
HMGB1P4-201ENST00000455362 SMCO1Q147U7 214 aa4.05□□□□□ -1.76
HMGB1P4-201ENST00000455362 POU2AF1Q16633 256 aa4.05□□□□□ -1.76
HMGB1P4-201ENST00000455362 TMEM249Q2WGJ8 235 aa4.05□□□□□ -1.76
HMGB1P4-201ENST00000455362 LAMTOR1Q6IAA8 161 aa4.05□□□□□ -1.76
HMGB1P4-201ENST00000455362 C11orf87Q6NUJ2 197 aa4.05□□□□□ -1.76
HMGB1P4-201ENST00000455362 ZNF546Q86UE3 836 aa4.05□□□□□ -1.76
HMGB1P4-201ENST00000455362 PDPNQ86YL7 162 aa4.05□□□□□ -1.76
HMGB1P4-201ENST00000455362 VKORC1L1Q8N0U8 176 aa4.05□□□□□ -1.76
HMGB1P4-201ENST00000455362 DYNAPQ8N1N2 210 aa4.05□□□□□ -1.76
HMGB1P4-201ENST00000455362 MAPK1IP1LQ8NDC0 245 aa4.05□□□□□ -1.76
HMGB1P4-201ENST00000455362 WFDC11Q8NEX6 87 aa4.05□□□□□ -1.76
HMGB1P4-201ENST00000455362 OR1S1Q8NH92 325 aa4.05□□□□□ -1.76
HMGB1P4-201ENST00000455362 RNASE11Q8TAA1 199 aaKnown RBP4.05□□□□□ -1.76
HMGB1P4-201ENST00000455362 RPEQ96AT9 228 aa4.05□□□□□ -1.76
HMGB1P4-201ENST00000455362 FLYWCH2Q96CP2 140 aaKnown RBP4.05□□□□□ -1.76
HMGB1P4-201ENST00000455362 FAM218AQ96MZ4 157 aa4.05□□□□□ -1.76
HMGB1P4-201ENST00000455362 FOXC2Q99958 501 aa4.05□□□□□ -1.76
HMGB1P4-201ENST00000455362 MAP1LC3CQ9BXW4 147 aa4.05□□□□□ -1.76
HMGB1P4-201ENST00000455362 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P4-201ENST00000455362 CLEC5AQ9NY25 188 aa4.05□□□□□ -1.76
HMGB1P4-201ENST00000455362 COA4Q9NYJ1 87 aa4.05□□□□□ -1.76
HMGB1P4-201ENST00000455362 CACNG5Q9UF02 275 aa4.05□□□□□ -1.76
HMGB1P4-201ENST00000455362 WASHC3Q9Y3C0 194 aa4.05□□□□□ -1.76
HMGB1P4-201ENST00000455362 TBL2Q9Y4P3 447 aaKnown RBP4.05□□□□□ -1.76
HMGB1P4-201ENST00000455362 HILPDAQ9Y5L2 63 aa4.05□□□□□ -1.76
HMGB1P4-201ENST00000455362 AUP1Q9Y679 476 aa4.05□□□□□ -1.76
HMGB1P4-201ENST00000455362 NSD1Q96L73 2696 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P4-201ENST00000455362 ANK3Q12955 4377 aaKnown RBP4.04□□□□□ -1.76
HMGB1P4-201ENST00000455362 FXYD6-FXYD2A0A087WZ82 144 aa4.04□□□□□ -1.76
HMGB1P4-201ENST00000455362 IGHV3-72A0A0B4J1Y9 119 aa4.04□□□□□ -1.76
HMGB1P4-201ENST00000455362 TRAV3A0A0B4J244 114 aa4.04□□□□□ -1.76
HMGB1P4-201ENST00000455362 IGHV1-69DA0A0B4J2H0 117 aa4.04□□□□□ -1.76
HMGB1P4-201ENST00000455362 J3QLI3 93 aa4.04□□□□□ -1.76
HMGB1P4-201ENST00000455362 K7EPK0 472 aa4.04□□□□□ -1.76
HMGB1P4-201ENST00000455362 UPK2O00526 184 aa4.04□□□□□ -1.76
HMGB1P4-201ENST00000455362 NPFFO15130 113 aa4.04□□□□□ -1.76
HMGB1P4-201ENST00000455362 NUPL2O15504 423 aaKnown RBP4.04□□□□□ -1.76
HMGB1P4-201ENST00000455362 DEDDO75618 318 aa4.04□□□□□ -1.76
HMGB1P4-201ENST00000455362 SNAPC5O75971 98 aa4.04□□□□□ -1.76
HMGB1P4-201ENST00000455362 IGLV2-23P01705 113 aa4.04□□□□□ -1.76
HMGB1P4-201ENST00000455362 IGHV1-69P01742 117 aa4.04□□□□□ -1.76
HMGB1P4-201ENST00000455362 CXCL2P19875 107 aa4.04□□□□□ -1.76
HMGB1P4-201ENST00000455362 PAX6P26367 422 aa4.04□□□□□ -1.76
HMGB1P4-201ENST00000455362 LGALS7P47929 136 aa4.04□□□□□ -1.76
HMGB1P4-201ENST00000455362 RAB13P51153 203 aa4.04□□□□□ -1.76
HMGB1P4-201ENST00000455362 AP2S1P53680 142 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P4-201ENST00000455362 UBE2G2P60604 165 aa4.04□□□□□ -1.76
HMGB1P4-201ENST00000455362 S100A10P60903 97 aa4.04□□□□□ -1.76
HMGB1P4-201ENST00000455362 ERVK-16P61578 105 aa4.04□□□□□ -1.76
HMGB1P4-201ENST00000455362 LGALSLQ3ZCW2 172 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P4-201ENST00000455362 PVRIGQ6DKI7 326 aa4.04□□□□□ -1.76
HMGB1P4-201ENST00000455362 PRSS54Q6PEW0 395 aa4.04□□□□□ -1.76
HMGB1P4-201ENST00000455362 ACOT7LQ6ZUV0 252 aa4.04□□□□□ -1.76
HMGB1P4-201ENST00000455362 PUSL1Q8N0Z8 303 aaKnown RBP4.04□□□□□ -1.76
HMGB1P4-201ENST00000455362 CIARTQ8N365 385 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P4-201ENST00000455362 C9orf62Q8N4C0 152 aa4.04□□□□□ -1.76
HMGB1P4-201ENST00000455362 FAM71E2Q8N5Q1 922 aa4.04□□□□□ -1.76
HMGB1P4-201ENST00000455362 OR4C13Q8NGP0 309 aa4.04□□□□□ -1.76
HMGB1P4-201ENST00000455362 GRPEL2Q8TAA5 225 aa4.04□□□□□ -1.76
HMGB1P4-201ENST00000455362 MALSU1Q96EH3 234 aa4.04□□□□□ -1.76
HMGB1P4-201ENST00000455362 RNF5Q99942 180 aa4.04□□□□□ -1.76
HMGB1P4-201ENST00000455362 PARD6GQ9BYG4 376 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P4-201ENST00000455362 PPDPFQ9H3Y8 114 aa4.04□□□□□ -1.76
HMGB1P4-201ENST00000455362 SAV1Q9H4B6 383 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P4-201ENST00000455362 C11orf1Q9H5F2 150 aa4.04□□□□□ -1.76
HMGB1P4-201ENST00000455362 RETNQ9HD89 108 aa4.04□□□□□ -1.76
HMGB1P4-201ENST00000455362 ZFP57Q9NU63 452 aa4.04□□□□□ -1.76
HMGB1P4-201ENST00000455362 OR5AC2Q9NZP5 309 aa4.04□□□□□ -1.76
HMGB1P4-201ENST00000455362 TNFSF18Q9UNG2 199 aa4.04□□□□□ -1.76
HMGB1P4-201ENST00000455362 LSM5Q9Y4Y9 91 aaKnown RBP4.04□□□□□ -1.76
HMGB1P4-201ENST00000455362 HSPB11Q9Y547 144 aa4.04□□□□□ -1.76
HMGB1P4-201ENST00000455362 HIVEP2P31629 2446 aa4.04□□□□□ -1.76
HMGB1P4-201ENST00000455362 MAST4O15021 2626 aa4.04□□□□□ -1.76
HMGB1P4-201ENST00000455362 NIPBLQ6KC79 2804 aaeCLIP4.03□□□□□ -1.76
HMGB1P4-201ENST00000455362 IGHV3OR16-10A0A075B7F0 116 aa4.03□□□□□ -1.76
HMGB1P4-201ENST00000455362 MSGN1A6NI15 193 aa4.03□□□□□ -1.76
HMGB1P4-201ENST00000455362 ARPC5O15511 151 aa4.03□□□□□ -1.76
HMGB1P4-201ENST00000455362 SYNGR2O43760 224 aa4.03□□□□□ -1.76
HMGB1P4-201ENST00000455362 KBTBD11O94819 623 aa4.03□□□□□ -1.76
HMGB1P4-201ENST00000455362 VENTXO95231 258 aa4.03□□□□□ -1.76
HMGB1P4-201ENST00000455362 MOSP00540 346 aa4.03□□□□□ -1.76
HMGB1P4-201ENST00000455362 PET100P0DJ07 73 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms