RNA–Protein interactions for RNA: ENST00000452660.5

LRCH3-209, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 681 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-209ENST00000452660 DERL2Q9GZP9 239 aa0.36□□□□□ -2.35
LRCH3-209ENST00000452660 NSRP1Q9H0G5 558 aaKnown RBP0.36□□□□□ -2.35
LRCH3-209ENST00000452660 GAL3ST2Q9H3Q3 398 aa0.36□□□□□ -2.35
LRCH3-209ENST00000452660 NIPAL2Q9H841 368 aa0.36□□□□□ -2.35
LRCH3-209ENST00000452660 LINC00574Q9H8X3 128 aa0.36□□□□□ -2.35
LRCH3-209ENST00000452660 NMRAL1Q9HBL8 299 aa0.36□□□□□ -2.35
LRCH3-209ENST00000452660 INIPQ9NRY2 104 aa0.36□□□□□ -2.35
LRCH3-209ENST00000452660 RBFOX1Q9NWB1 397 aaKnown RBP0.36□□□□□ -2.35
LRCH3-209ENST00000452660 C21orf62Q9NYP8 219 aa0.36□□□□□ -2.35
LRCH3-209ENST00000452660 IDI2-AS1Q9NZ38 188 aa0.36□□□□□ -2.35
LRCH3-209ENST00000452660 MTCH1Q9NZJ7 389 aa0.36□□□□□ -2.35
LRCH3-209ENST00000452660 PCTPQ9UKL6 214 aa0.36□□□□□ -2.35
LRCH3-209ENST00000452660 IKZF2Q9UKS7 526 aa0.36□□□□□ -2.35
LRCH3-209ENST00000452660 ZNF257Q9Y2Q1 563 aa0.36□□□□□ -2.35
LRCH3-209ENST00000452660 NOP16Q9Y3C1 178 aaKnown RBP0.36□□□□□ -2.35
LRCH3-209ENST00000452660 UFC1Q9Y3C8 167 aa0.36□□□□□ -2.35
LRCH3-209ENST00000452660 ICOSQ9Y6W8 199 aa0.36□□□□□ -2.35
LRCH3-209ENST00000452660 V9GYY5 206 aaPredicted RBP0.36□□□□□ -2.35
LRCH3-209ENST00000452660 IGKV1-27A0A075B6S5 117 aa0.35□□□□□ -2.35
LRCH3-209ENST00000452660 TRAV27A0A087WT01 109 aa0.35□□□□□ -2.35
LRCH3-209ENST00000452660 MEIKINA0A087WXM9 373 aa0.35□□□□□ -2.35
LRCH3-209ENST00000452660 A0A096LNI7 61 aa0.35□□□□□ -2.35
LRCH3-209ENST00000452660 TRBV9A0A0B4J1U6 114 aa0.35□□□□□ -2.35
LRCH3-209ENST00000452660 A0A0B4J2E0 115 aa0.35□□□□□ -2.35
LRCH3-209ENST00000452660 IGHV7-4-1A0A0J9YVY3 117 aa0.35□□□□□ -2.35
LRCH3-209ENST00000452660 A0A1B0GX12 115 aa0.35□□□□□ -2.35
LRCH3-209ENST00000452660 C9orf92A6NGG3 77 aa0.35□□□□□ -2.35
LRCH3-209ENST00000452660 SMIM9A6NGZ8 99 aa0.35□□□□□ -2.35
LRCH3-209ENST00000452660 TVP23AA6NH52 213 aa0.35□□□□□ -2.35
LRCH3-209ENST00000452660 FAM223BA6NKX1 122 aa0.35□□□□□ -2.35
LRCH3-209ENST00000452660 TMEM210A6NLX4 147 aa0.35□□□□□ -2.35
LRCH3-209ENST00000452660 CPSF4LA6NMK7 179 aaKnown RBP0.35□□□□□ -2.35
LRCH3-209ENST00000452660 TMEM14DPA8MWL7 114 aa0.35□□□□□ -2.35
LRCH3-209ENST00000452660 E7EUB6 86 aa0.35□□□□□ -2.35
LRCH3-209ENST00000452660 H3BMM0 161 aa0.35□□□□□ -2.35
LRCH3-209ENST00000452660 H3BUA1 57 aa0.35□□□□□ -2.35
LRCH3-209ENST00000452660 H7C2Y5 167 aa0.35□□□□□ -2.35
LRCH3-209ENST00000452660 M0R2Z0 102 aa0.35□□□□□ -2.35
LRCH3-209ENST00000452660 SDCBPO00560 298 aaPredicted RBP0.35□□□□□ -2.35
LRCH3-209ENST00000452660 LSM1O15116 133 aaKnown RBP0.35□□□□□ -2.35
LRCH3-209ENST00000452660 ARPC3O15145 178 aa0.35□□□□□ -2.35
LRCH3-209ENST00000452660 PSTPIP1O43586 416 aa0.35□□□□□ -2.35
LRCH3-209ENST00000452660 TPST1O60507 370 aa0.35□□□□□ -2.35
LRCH3-209ENST00000452660 NOL3O60936 208 aaKnown RBP0.35□□□□□ -2.35
LRCH3-209ENST00000452660 ENTPD6O75354 484 aa0.35□□□□□ -2.35
LRCH3-209ENST00000452660 EIF3GO75821 320 aaKnown RBP eCLIP0.35□□□□□ -2.35
LRCH3-209ENST00000452660 OR2H2O95918 312 aa0.35□□□□□ -2.35
LRCH3-209ENST00000452660 CST1P01037 141 aa0.35□□□□□ -2.35
LRCH3-209ENST00000452660 MT-ND6P03923 174 aa0.35□□□□□ -2.35
LRCH3-209ENST00000452660 IL6P05231 212 aa0.35□□□□□ -2.35
LRCH3-209ENST00000452660 PTMAP06454 111 aaKnown RBP0.35□□□□□ -2.35
LRCH3-209ENST00000452660 DBIP07108 87 aaKnown RBP0.35□□□□□ -2.35
LRCH3-209ENST00000452660 FGF4P08620 206 aa0.35□□□□□ -2.35
LRCH3-209ENST00000452660 TSPAN19P0C672 248 aa0.35□□□□□ -2.35
LRCH3-209ENST00000452660 ASAH2BP0C7U1 165 aa0.35□□□□□ -2.35
LRCH3-209ENST00000452660 CCDC172P0C7W6 258 aa0.35□□□□□ -2.35
LRCH3-209ENST00000452660 PRKACAP17612 351 aa0.35□□□□□ -2.35
LRCH3-209ENST00000452660 SRMP19623 302 aa0.35□□□□□ -2.35
LRCH3-209ENST00000452660 GZMHP20718 246 aa0.35□□□□□ -2.35
LRCH3-209ENST00000452660 PPIBP23284 216 aaKnown RBP0.35□□□□□ -2.35
LRCH3-209ENST00000452660 PSMB6P28072 239 aa0.35□□□□□ -2.35
LRCH3-209ENST00000452660 GUCA1AP43080 201 aaPredicted RBP0.35□□□□□ -2.35
LRCH3-209ENST00000452660 SERPINB9P50453 376 aa0.35□□□□□ -2.35
LRCH3-209ENST00000452660 PPT1P50897 306 aa0.35□□□□□ -2.35
LRCH3-209ENST00000452660 RPL38P63173 70 aaKnown RBP0.35□□□□□ -2.35
LRCH3-209ENST00000452660 GNG3P63215 75 aa0.35□□□□□ -2.35
LRCH3-209ENST00000452660 CDK5Q00535 292 aa0.35□□□□□ -2.35
LRCH3-209ENST00000452660 COX6A2Q02221 97 aa0.35□□□□□ -2.35
LRCH3-209ENST00000452660 MXD1Q05195 221 aa0.35□□□□□ -2.35
LRCH3-209ENST00000452660 OR1Q1Q15612 314 aa0.35□□□□□ -2.35
LRCH3-209ENST00000452660 TNXAQ16473 311 aa0.35□□□□□ -2.35
LRCH3-209ENST00000452660 IMPG1Q17R60 797 aa0.35□□□□□ -2.35
LRCH3-209ENST00000452660 LIN52Q52LA3 116 aa0.35□□□□□ -2.35
LRCH3-209ENST00000452660 SPIN4Q56A73 249 aa0.35□□□□□ -2.35
LRCH3-209ENST00000452660 YIF1BQ5BJH7 314 aa0.35□□□□□ -2.35
LRCH3-209ENST00000452660 TEX30Q5JUR7 227 aa0.35□□□□□ -2.35
LRCH3-209ENST00000452660 AADACL4Q5VUY2 407 aa0.35□□□□□ -2.35
LRCH3-209ENST00000452660 NXNL2Q5VZ03 156 aa0.35□□□□□ -2.35
LRCH3-209ENST00000452660 TBPL2Q6SJ96 375 aa0.35□□□□□ -2.35
LRCH3-209ENST00000452660 Q6ZQT7 251 aa0.35□□□□□ -2.35
LRCH3-209ENST00000452660 IDO2Q6ZQW0 420 aa0.35□□□□□ -2.35
LRCH3-209ENST00000452660 SLC25A48Q6ZT89 311 aaKnown RBP0.35□□□□□ -2.35
LRCH3-209ENST00000452660 Q6ZTI0 123 aa0.35□□□□□ -2.35
LRCH3-209ENST00000452660 PHF5AQ7RTV0 110 aaKnown RBP0.35□□□□□ -2.35
LRCH3-209ENST00000452660 RBM45Q8IUH3 476 aaKnown RBP0.35□□□□□ -2.35
LRCH3-209ENST00000452660 FAM223AQ8IWN6 122 aa0.35□□□□□ -2.35
LRCH3-209ENST00000452660 C10orf126Q8N4M7 172 aa0.35□□□□□ -2.35
LRCH3-209ENST00000452660 FER1L6-AS1Q8NA97 138 aa0.35□□□□□ -2.35
LRCH3-209ENST00000452660 UBAC2Q8NBM4 344 aa0.35□□□□□ -2.35
LRCH3-209ENST00000452660 ZNF439Q8NDP4 499 aa0.35□□□□□ -2.35
LRCH3-209ENST00000452660 OR4D11Q8NGI4 311 aa0.35□□□□□ -2.35
LRCH3-209ENST00000452660 OR52M1Q8NGK5 317 aa0.35□□□□□ -2.35
LRCH3-209ENST00000452660 OR4A15Q8NGL6 344 aa0.35□□□□□ -2.35
LRCH3-209ENST00000452660 OR10R2Q8NGX6 335 aa0.35□□□□□ -2.35
LRCH3-209ENST00000452660 ATP6V0E2Q8NHE4 81 aa0.35□□□□□ -2.35
LRCH3-209ENST00000452660 PLPPR1Q8TBJ4 325 aa0.35□□□□□ -2.35
LRCH3-209ENST00000452660 STAG3L4Q8TBR4 150 aa0.35□□□□□ -2.35
LRCH3-209ENST00000452660 ZNF502Q8TBZ5 544 aa0.35□□□□□ -2.35
LRCH3-209ENST00000452660 ACOT12Q8WYK0 555 aa0.35□□□□□ -2.35
LRCH3-209ENST00000452660 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP0.35□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms