RNA–Protein interactions for RNA: ENST00000452520.1

HMGB1P26-201, Transcript of high mobility group box 1 pseudogene 26, humanhuman

BASIC

Gene HMGB1P26, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P26-201ENST00000452520 HMSDA8MTL9 139 aa2.48□□□□□ -2.01
HMGB1P26-201ENST00000452520 H7BYZ3 331 aa2.48□□□□□ -2.01
HMGB1P26-201ENST00000452520 GGCTO75223 188 aaKnown RBP2.48□□□□□ -2.01
HMGB1P26-201ENST00000452520 METTL15P1P0C7V9 234 aa2.48□□□□□ -2.01
HMGB1P26-201ENST00000452520 DYNLT3P51808 116 aa2.48□□□□□ -2.01
HMGB1P26-201ENST00000452520 AQP4P55087 323 aa2.48□□□□□ -2.01
HMGB1P26-201ENST00000452520 UBE2BP63146 152 aa2.48□□□□□ -2.01
HMGB1P26-201ENST00000452520 HCP5Q6MZN7 132 aa2.48□□□□□ -2.01
HMGB1P26-201ENST00000452520 C22orf39Q6P5X5 142 aa2.48□□□□□ -2.01
HMGB1P26-201ENST00000452520 CROCCP2Q86T23 111 aa2.48□□□□□ -2.01
HMGB1P26-201ENST00000452520 LRRC28Q86X40 367 aaPredicted RBP2.48□□□□□ -2.01
HMGB1P26-201ENST00000452520 OR4E2Q8NGC2 313 aa2.48□□□□□ -2.01
HMGB1P26-201ENST00000452520 AQP3Q92482 292 aa2.48□□□□□ -2.01
HMGB1P26-201ENST00000452520 ISOC1Q96CN7 298 aa2.48□□□□□ -2.01
HMGB1P26-201ENST00000452520 PRADC1Q9BSG0 188 aa2.48□□□□□ -2.01
HMGB1P26-201ENST00000452520 OTORQ9NRC9 128 aa2.48□□□□□ -2.01
HMGB1P26-201ENST00000452520 WDR90Q96KV7 1748 aa2.48□□□□□ -2.01
HMGB1P26-201ENST00000452520 MYO16Q9Y6X6 1858 aa2.48□□□□□ -2.01
HMGB1P26-201ENST00000452520 ZSWIM8A7E2V4 1837 aa2.47□□□□□ -2.01
HMGB1P26-201ENST00000452520 DOCK4Q8N1I0 1966 aa2.47□□□□□ -2.01
HMGB1P26-201ENST00000452520 TRGV10A0A0A0MS01 117 aa2.47□□□□□ -2.01
HMGB1P26-201ENST00000452520 MEIS3P1A6NDR6 274 aa2.47□□□□□ -2.01
HMGB1P26-201ENST00000452520 KPNA4O00629 521 aaPredicted RBP2.47□□□□□ -2.01
HMGB1P26-201ENST00000452520 CXCL1P09341 107 aa2.47□□□□□ -2.01
HMGB1P26-201ENST00000452520 OR10J4P0C629 311 aa2.47□□□□□ -2.01
HMGB1P26-201ENST00000452520 FKBP2P26885 142 aaKnown RBP2.47□□□□□ -2.01
HMGB1P26-201ENST00000452520 S100A11P31949 105 aa2.47□□□□□ -2.01
HMGB1P26-201ENST00000452520 POLR2HP52434 150 aaKnown RBP2.47□□□□□ -2.01
HMGB1P26-201ENST00000452520 TMBIM6P55061 237 aa2.47□□□□□ -2.01
HMGB1P26-201ENST00000452520 S100A12P80511 92 aa2.47□□□□□ -2.01
HMGB1P26-201ENST00000452520 MSMO1Q15800 293 aa2.47□□□□□ -2.01
HMGB1P26-201ENST00000452520 NNATQ16517 81 aa2.47□□□□□ -2.01
HMGB1P26-201ENST00000452520 HRCT1Q6UXD1 115 aa2.47□□□□□ -2.01
HMGB1P26-201ENST00000452520 Q6ZTI0 123 aa2.47□□□□□ -2.01
HMGB1P26-201ENST00000452520 AAED1Q7RTV5 226 aa2.47□□□□□ -2.01
HMGB1P26-201ENST00000452520 BORCS8Q96FH0 119 aa2.47□□□□□ -2.01
HMGB1P26-201ENST00000452520 YIPF3Q9GZM5 350 aa2.47□□□□□ -2.01
HMGB1P26-201ENST00000452520 POPDC3Q9HBV1 291 aa2.47□□□□□ -2.01
HMGB1P26-201ENST00000452520 SPANXA1Q9NS26 97 aa2.47□□□□□ -2.01
HMGB1P26-201ENST00000452520 LAMTOR2Q9Y2Q5 125 aa2.47□□□□□ -2.01
HMGB1P26-201ENST00000452520 RNF11Q9Y3C5 154 aa2.47□□□□□ -2.01
HMGB1P26-201ENST00000452520 SLIT2O94813 1529 aa2.47□□□□□ -2.01
HMGB1P26-201ENST00000452520 SCAF11Q99590 1463 aaKnown RBP2.46□□□□□ -2.02
HMGB1P26-201ENST00000452520 MED1Q15648 1581 aaPredicted RBP2.46□□□□□ -2.02
HMGB1P26-201ENST00000452520 A0A087WX48 190 aa2.46□□□□□ -2.02
HMGB1P26-201ENST00000452520 A0A0G2JQZ4 141 aa2.46□□□□□ -2.02
HMGB1P26-201ENST00000452520 C7orf71A4D174 169 aa2.46□□□□□ -2.02
HMGB1P26-201ENST00000452520 ZNF705FA8MVS1 300 aaPredicted RBP2.46□□□□□ -2.02
HMGB1P26-201ENST00000452520 J3QQQ9 107 aa2.46□□□□□ -2.02
HMGB1P26-201ENST00000452520 NDUFB3O43676 98 aa2.46□□□□□ -2.02
HMGB1P26-201ENST00000452520 PGLYRP1O75594 196 aaPredicted RBP2.46□□□□□ -2.02
HMGB1P26-201ENST00000452520 PMP2P02689 132 aa2.46□□□□□ -2.02
HMGB1P26-201ENST00000452520 CTSDP07339 412 aaPredicted RBP2.46□□□□□ -2.02
HMGB1P26-201ENST00000452520 BCL2P10415 239 aa2.46□□□□□ -2.02
HMGB1P26-201ENST00000452520 COX6A1P12074 109 aa2.46□□□□□ -2.02
HMGB1P26-201ENST00000452520 LGALS3P17931 250 aaKnown RBP2.46□□□□□ -2.02
HMGB1P26-201ENST00000452520 RPS3P23396 243 aaKnown RBP eCLIP2.46□□□□□ -2.02
HMGB1P26-201ENST00000452520 FUSP35637 526 aaKnown RBP eCLIP2.46□□□□□ -2.02
HMGB1P26-201ENST00000452520 RPL26P61254 145 aaKnown RBP2.46□□□□□ -2.02
HMGB1P26-201ENST00000452520 RPS28P62857 69 aaKnown RBP2.46□□□□□ -2.02
HMGB1P26-201ENST00000452520 DYNLT1P63172 113 aa2.46□□□□□ -2.02
HMGB1P26-201ENST00000452520 RHOGP84095 191 aa2.46□□□□□ -2.02
HMGB1P26-201ENST00000452520 PLCXD2Q0VAA5 305 aa2.46□□□□□ -2.02
HMGB1P26-201ENST00000452520 NDUFA5Q16718 116 aa2.46□□□□□ -2.02
HMGB1P26-201ENST00000452520 SOSTDC1Q6X4U4 206 aa2.46□□□□□ -2.02
HMGB1P26-201ENST00000452520 DHFR2Q86XF0 187 aa2.46□□□□□ -2.02
HMGB1P26-201ENST00000452520 ANGPTL5Q86XS5 388 aa2.46□□□□□ -2.02
HMGB1P26-201ENST00000452520 NPCDR1Q9BY65 106 aa2.46□□□□□ -2.02
HMGB1P26-201ENST00000452520 TRAPPC2LQ9UL33 140 aa2.46□□□□□ -2.02
HMGB1P26-201ENST00000452520 RPL26L1Q9UNX3 145 aaKnown RBP2.46□□□□□ -2.02
HMGB1P26-201ENST00000452520 TECPR2O15040 1411 aa2.45□□□□□ -2.02
HMGB1P26-201ENST00000452520 TRDV1A0A1B0GX56 115 aa2.45□□□□□ -2.02
HMGB1P26-201ENST00000452520 ARRDC5A6NEK1 342 aa2.45□□□□□ -2.02
HMGB1P26-201ENST00000452520 ARL5CA6NH57 179 aa2.45□□□□□ -2.02
HMGB1P26-201ENST00000452520 FAM107AO95990 144 aa2.45□□□□□ -2.02
HMGB1P26-201ENST00000452520 DHFRP00374 187 aa2.45□□□□□ -2.02
HMGB1P26-201ENST00000452520 ARPP19P56211 112 aa2.45□□□□□ -2.02
HMGB1P26-201ENST00000452520 SLC38A11Q08AI6 406 aa2.45□□□□□ -2.02
HMGB1P26-201ENST00000452520 ZNF345Q14585 488 aa2.45□□□□□ -2.02
HMGB1P26-201ENST00000452520 TAF9Q16594 264 aa2.45□□□□□ -2.02
HMGB1P26-201ENST00000452520 EIF5AL1Q6IS14 154 aaKnown RBP2.45□□□□□ -2.02
HMGB1P26-201ENST00000452520 DEFB128Q7Z7B8 93 aa2.45□□□□□ -2.02
HMGB1P26-201ENST00000452520 PRR15Q8IV56 129 aa2.45□□□□□ -2.02
HMGB1P26-201ENST00000452520 IFT20Q8IY31 132 aa2.45□□□□□ -2.02
HMGB1P26-201ENST00000452520 C9orf163Q8N9P6 203 aa2.45□□□□□ -2.02
HMGB1P26-201ENST00000452520 OR8B3Q8NGG8 313 aa2.45□□□□□ -2.02
HMGB1P26-201ENST00000452520 SLC25A21Q9BQT8 299 aaPredicted RBP2.45□□□□□ -2.02
HMGB1P26-201ENST00000452520 NAT8BQ9UHF3 227 aa2.45□□□□□ -2.02
HMGB1P26-201ENST00000452520 JPT1Q9UK76 154 aa2.45□□□□□ -2.02
HMGB1P26-201ENST00000452520 MED31Q9Y3C7 131 aa2.45□□□□□ -2.02
HMGB1P26-201ENST00000452520 ARHGEF10O15013 1369 aa2.45□□□□□ -2.02
HMGB1P26-201ENST00000452520 FANCD2Q9BXW9 1451 aa2.45□□□□□ -2.02
HMGB1P26-201ENST00000452520 CEP164Q9UPV0 1460 aa2.45□□□□□ -2.02
HMGB1P26-201ENST00000452520 ECM29Q5VYK3 1845 aa2.45□□□□□ -2.02
HMGB1P26-201ENST00000452520 LAMC3Q9Y6N6 1575 aa2.44□□□□□ -2.02
HMGB1P26-201ENST00000452520 IGKV1D-42A0A075B6H8 117 aa2.44□□□□□ -2.02
HMGB1P26-201ENST00000452520 DEGS1O15121 323 aa2.44□□□□□ -2.02
HMGB1P26-201ENST00000452520 HLA-EP13747 358 aa2.44□□□□□ -2.02
HMGB1P26-201ENST00000452520 SMCO1Q147U7 214 aa2.44□□□□□ -2.02
HMGB1P26-201ENST00000452520 SLC30A7Q8NEW0 376 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms