RNA–Protein interactions for RNA: ENST00000448833.5

VPS41-208, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 1 (best)

Gene VPS41, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-208ENST00000448833 AKR1C4P17516 323 aa5.16□□□□□ -1.58
VPS41-208ENST00000448833 GPX4P36969 197 aaPredicted RBP5.16□□□□□ -1.58
VPS41-208ENST00000448833 ID1P41134 155 aa5.16□□□□□ -1.58
VPS41-208ENST00000448833 RND2P52198 227 aa5.16□□□□□ -1.58
VPS41-208ENST00000448833 TMBIM6P55061 237 aa5.16□□□□□ -1.58
VPS41-208ENST00000448833 AP3S2P59780 193 aa5.16□□□□□ -1.58
VPS41-208ENST00000448833 NANOS2P60321 138 aaKnown RBP5.16□□□□□ -1.58
VPS41-208ENST00000448833 RPP30P78346 268 aaKnown RBP5.16□□□□□ -1.58
VPS41-208ENST00000448833 KLF9Q13886 244 aaPredicted RBP5.16□□□□□ -1.58
VPS41-208ENST00000448833 SMCO1Q147U7 214 aa5.16□□□□□ -1.58
VPS41-208ENST00000448833 MLANAQ16655 118 aa5.16□□□□□ -1.58
VPS41-208ENST00000448833 TIGITQ495A1 244 aa5.16□□□□□ -1.58
VPS41-208ENST00000448833 NMSQ5H8A3 153 aa5.16□□□□□ -1.58
VPS41-208ENST00000448833 ACTL10Q5JWF8 245 aa5.16□□□□□ -1.58
VPS41-208ENST00000448833 C1orf194Q5T5A4 169 aa5.16□□□□□ -1.58
VPS41-208ENST00000448833 SPATA31B1PQ5VZV4 182 aa5.16□□□□□ -1.58
VPS41-208ENST00000448833 Q6ZRM9 215 aa5.16□□□□□ -1.58
VPS41-208ENST00000448833 CLVS1Q8IUQ0 354 aaPredicted RBP5.16□□□□□ -1.58
VPS41-208ENST00000448833 LGI3Q8N145 548 aa5.16□□□□□ -1.58
VPS41-208ENST00000448833 OR51S1Q8NGJ8 323 aa5.16□□□□□ -1.58
VPS41-208ENST00000448833 OR51G1Q8NGK1 321 aa5.16□□□□□ -1.58
VPS41-208ENST00000448833 DCANP1Q8TF63 244 aa5.16□□□□□ -1.58
VPS41-208ENST00000448833 DEDD2Q8WXF8 326 aa5.16□□□□□ -1.58
VPS41-208ENST00000448833 GPR146Q96CH1 333 aa5.16□□□□□ -1.58
VPS41-208ENST00000448833 RAB40CQ96S21 281 aa5.16□□□□□ -1.58
VPS41-208ENST00000448833 NRN1Q9NPD7 142 aa5.16□□□□□ -1.58
VPS41-208ENST00000448833 SHPKQ9UHJ6 478 aa5.16□□□□□ -1.58
VPS41-208ENST00000448833 TBC1D24Q9ULP9 559 aa5.16□□□□□ -1.58
VPS41-208ENST00000448833 A0A0G2JRQ6 117 aa5.15□□□□□ -1.59
VPS41-208ENST00000448833 TMEM189A5PLL7 270 aa5.15□□□□□ -1.59
VPS41-208ENST00000448833 FABP12A6NFH5 140 aa5.15□□□□□ -1.59
VPS41-208ENST00000448833 SMIM9A6NGZ8 99 aa5.15□□□□□ -1.59
VPS41-208ENST00000448833 SNRPGP15A8MWD9 76 aa5.15□□□□□ -1.59
VPS41-208ENST00000448833 IGLL5B9A064 214 aa5.15□□□□□ -1.59
VPS41-208ENST00000448833 CTDSP2O14595 271 aa5.15□□□□□ -1.59
VPS41-208ENST00000448833 BUB3O43684 328 aa5.15□□□□□ -1.59
VPS41-208ENST00000448833 MED6O75586 246 aa5.15□□□□□ -1.59
VPS41-208ENST00000448833 RAB11AP62491 216 aa5.15□□□□□ -1.59
VPS41-208ENST00000448833 PSMG4Q5JS54 123 aa5.15□□□□□ -1.59
VPS41-208ENST00000448833 OR8G2PQ6IF36 304 aa5.15□□□□□ -1.59
VPS41-208ENST00000448833 SIGLEC15Q6ZMC9 328 aa5.15□□□□□ -1.59
VPS41-208ENST00000448833 Q8NAQ8 132 aa5.15□□□□□ -1.59
VPS41-208ENST00000448833 OR4C16Q8NGL9 310 aa5.15□□□□□ -1.59
VPS41-208ENST00000448833 DTD1Q8TEA8 209 aa5.15□□□□□ -1.59
VPS41-208ENST00000448833 GLMPQ8WWB7 406 aa5.15□□□□□ -1.59
VPS41-208ENST00000448833 NPIPB3Q92617 1050 aa5.15□□□□□ -1.59
VPS41-208ENST00000448833 ACY3Q96HD9 319 aa5.15□□□□□ -1.59
VPS41-208ENST00000448833 CLUHP3Q96NS8 147 aa5.15□□□□□ -1.59
VPS41-208ENST00000448833 NAA50Q9GZZ1 169 aaKnown RBP5.15□□□□□ -1.59
VPS41-208ENST00000448833 MIXL1Q9H2W2 232 aa5.15□□□□□ -1.59
VPS41-208ENST00000448833 MCUBQ9NWR8 336 aa5.15□□□□□ -1.59
VPS41-208ENST00000448833 CCDC59Q9P031 241 aaKnown RBP5.15□□□□□ -1.59
VPS41-208ENST00000448833 MRPL36Q9P0J6 103 aaKnown RBP5.15□□□□□ -1.59
VPS41-208ENST00000448833 HSPB7Q9UBY9 170 aa5.15□□□□□ -1.59
VPS41-208ENST00000448833 ALMS1Q8TCU4 4167 aa5.15□□□□□ -1.59
VPS41-208ENST00000448833 IGHV4-28A0A0C4DH34 117 aa5.14□□□□□ -1.59
VPS41-208ENST00000448833 TEX48A0A1B0GUV7 120 aa5.14□□□□□ -1.59
VPS41-208ENST00000448833 ZFP92A6NM28 416 aa5.14□□□□□ -1.59
VPS41-208ENST00000448833 FAM90A26D6RGX4 464 aa5.14□□□□□ -1.59
VPS41-208ENST00000448833 SMIM18P0DKX4 95 aa5.14□□□□□ -1.59
VPS41-208ENST00000448833 PSG1P11464 419 aa5.14□□□□□ -1.59
VPS41-208ENST00000448833 SLC25A6P12236 298 aa5.14□□□□□ -1.59
VPS41-208ENST00000448833 HLA-DMBP28068 263 aa5.14□□□□□ -1.59
VPS41-208ENST00000448833 NKX2-1P43699 371 aaPredicted RBP5.14□□□□□ -1.59
VPS41-208ENST00000448833 ALDH3B2P48448 385 aa5.14□□□□□ -1.59
VPS41-208ENST00000448833 MEOX2P50222 304 aa5.14□□□□□ -1.59
VPS41-208ENST00000448833 ID3Q02535 119 aa5.14□□□□□ -1.59
VPS41-208ENST00000448833 TMEM128Q5BJH2 165 aa5.14□□□□□ -1.59
VPS41-208ENST00000448833 GGNBP1Q5YKI7 109 aa5.14□□□□□ -1.59
VPS41-208ENST00000448833 S100A7AQ86SG5 101 aa5.14□□□□□ -1.59
VPS41-208ENST00000448833 FAM24BQ8N5W8 94 aa5.14□□□□□ -1.59
VPS41-208ENST00000448833 OR1S1Q8NH92 325 aa5.14□□□□□ -1.59
VPS41-208ENST00000448833 LHFPL5Q8TAF8 219 aa5.14□□□□□ -1.59
VPS41-208ENST00000448833 DYNC2LI1Q8TCX1 351 aa5.14□□□□□ -1.59
VPS41-208ENST00000448833 RNF125Q96EQ8 232 aa5.14□□□□□ -1.59
VPS41-208ENST00000448833 SLC35E1Q96K37 410 aa5.14□□□□□ -1.59
VPS41-208ENST00000448833 CIB3Q96Q77 187 aaPredicted RBP5.14□□□□□ -1.59
VPS41-208ENST00000448833 SLC25A21Q9BQT8 299 aaPredicted RBP5.14□□□□□ -1.59
VPS41-208ENST00000448833 RNF126Q9BV68 326 aa5.14□□□□□ -1.59
VPS41-208ENST00000448833 KNCNA6PVL3 124 aa5.13□□□□□ -1.59
VPS41-208ENST00000448833 H3BMM0 161 aa5.13□□□□□ -1.59
VPS41-208ENST00000448833 DEFB4AO15263 64 aa5.13□□□□□ -1.59
VPS41-208ENST00000448833 GIG44P09565 113 aaPredicted RBP5.13□□□□□ -1.59
VPS41-208ENST00000448833 RBMY1A1P0DJD3 496 aaKnown RBP5.13□□□□□ -1.59
VPS41-208ENST00000448833 RBMY1CP0DJD4 496 aa5.13□□□□□ -1.59
VPS41-208ENST00000448833 P0DMU3 169 aa5.13□□□□□ -1.59
VPS41-208ENST00000448833 FAM231AP0DMU4 169 aa5.13□□□□□ -1.59
VPS41-208ENST00000448833 FAM231CP0DMU5 169 aa5.13□□□□□ -1.59
VPS41-208ENST00000448833 PSMB3P49720 205 aa5.13□□□□□ -1.59
VPS41-208ENST00000448833 SUPT4H1P63272 117 aaKnown RBP5.13□□□□□ -1.59
VPS41-208ENST00000448833 SPCS2Q15005 226 aa5.13□□□□□ -1.59
VPS41-208ENST00000448833 RBMY1FQ15415 496 aaKnown RBP5.13□□□□□ -1.59
VPS41-208ENST00000448833 USF2Q15853 346 aaPredicted RBP5.13□□□□□ -1.59
VPS41-208ENST00000448833 FAAP20Q6NZ36 180 aa5.13□□□□□ -1.59
VPS41-208ENST00000448833 RPP25LQ8N5L8 163 aaKnown RBP5.13□□□□□ -1.59
VPS41-208ENST00000448833 CSNK1G2-AS1Q8NCQ2 148 aa5.13□□□□□ -1.59
VPS41-208ENST00000448833 PPP1R14BQ96C90 147 aa5.13□□□□□ -1.59
VPS41-208ENST00000448833 FAM210BQ96KR6 192 aa5.13□□□□□ -1.59
VPS41-208ENST00000448833 NEU1Q99519 415 aa5.13□□□□□ -1.59
VPS41-208ENST00000448833 RBKSQ9H477 322 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms