RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 DPH3Q96FX2 82 aa2.9□□□□□ -1.95
CDC42BPA-207ENST00000441725 ZNF799Q96GE5 643 aa2.9□□□□□ -1.95
CDC42BPA-207ENST00000441725 C16orf74Q96GX8 76 aa2.9□□□□□ -1.95
CDC42BPA-207ENST00000441725 AICDAQ9GZX7 198 aa2.9□□□□□ -1.95
CDC42BPA-207ENST00000441725 TRMT112Q9UI30 125 aaKnown RBP2.9□□□□□ -1.95
CDC42BPA-207ENST00000441725 LINC00312Q9Y6C7 94 aa2.9□□□□□ -1.95
CDC42BPA-207ENST00000441725 TNRC6AQ8NDV7 1962 aaKnown RBP2.9□□□□□ -1.95
CDC42BPA-207ENST00000441725 PIK3C2AO00443 1686 aa2.89□□□□□ -1.95
CDC42BPA-207ENST00000441725 ALS2Q96Q42 1657 aa2.89□□□□□ -1.95
CDC42BPA-207ENST00000441725 ARFGEF1Q9Y6D6 1849 aa2.89□□□□□ -1.95
CDC42BPA-207ENST00000441725 IGKV1-8A0A0C4DH67 115 aa2.89□□□□□ -1.95
CDC42BPA-207ENST00000441725 ISLRO14498 428 aa2.89□□□□□ -1.95
CDC42BPA-207ENST00000441725 TRANK1O15050 2925 aa2.89□□□□□ -1.95
CDC42BPA-207ENST00000441725 LYZL6O75951 148 aa2.89□□□□□ -1.95
CDC42BPA-207ENST00000441725 MT-ATP8P03928 68 aa2.89□□□□□ -1.95
CDC42BPA-207ENST00000441725 IFITM1P13164 125 aa2.89□□□□□ -1.95
CDC42BPA-207ENST00000441725 OR10J1P30954 320 aa2.89□□□□□ -1.95
CDC42BPA-207ENST00000441725 ZNF93P35789 620 aaPredicted RBP2.89□□□□□ -1.95
CDC42BPA-207ENST00000441725 OPRK1P41145 380 aa2.89□□□□□ -1.95
CDC42BPA-207ENST00000441725 NMUP48645 174 aa2.89□□□□□ -1.95
CDC42BPA-207ENST00000441725 RPS11P62280 158 aaKnown RBP eCLIP2.89□□□□□ -1.95
CDC42BPA-207ENST00000441725 KLRD1Q13241 179 aa2.89□□□□□ -1.95
CDC42BPA-207ENST00000441725 RBMY1FQ15415 496 aaKnown RBP2.89□□□□□ -1.95
CDC42BPA-207ENST00000441725 KRTAP27-1Q3LI81 207 aa2.89□□□□□ -1.95
CDC42BPA-207ENST00000441725 SSX8Q7RTT4 187 aa2.89□□□□□ -1.95
CDC42BPA-207ENST00000441725 VN1R4Q7Z5H5 301 aa2.89□□□□□ -1.95
CDC42BPA-207ENST00000441725 PRR15Q8IV56 129 aa2.89□□□□□ -1.95
CDC42BPA-207ENST00000441725 TMEM75Q8N9X5 138 aa2.89□□□□□ -1.95
CDC42BPA-207ENST00000441725 OR4A5Q8NH83 315 aa2.89□□□□□ -1.95
CDC42BPA-207ENST00000441725 PSMF1Q92530 271 aa2.89□□□□□ -1.95
CDC42BPA-207ENST00000441725 PEBP4Q96S96 227 aa2.89□□□□□ -1.95
CDC42BPA-207ENST00000441725 NMNAT3Q96T66 252 aa2.89□□□□□ -1.95
CDC42BPA-207ENST00000441725 TRPM3Q9HCF6 1732 aaPredicted RBP2.89□□□□□ -1.95
CDC42BPA-207ENST00000441725 HEBP1Q9NRV9 189 aa2.89□□□□□ -1.95
CDC42BPA-207ENST00000441725 HES2Q9Y543 173 aa2.89□□□□□ -1.95
CDC42BPA-207ENST00000441725 RGPD8O14715 1765 aaPredicted RBP2.89□□□□□ -1.95
CDC42BPA-207ENST00000441725 DOCK4Q8N1I0 1966 aa2.89□□□□□ -1.95
CDC42BPA-207ENST00000441725 TRBV19A0A075B6N1 114 aa2.88□□□□□ -1.95
CDC42BPA-207ENST00000441725 PIRO00625 290 aa2.88□□□□□ -1.95
CDC42BPA-207ENST00000441725 TAX1BP3O14907 124 aa2.88□□□□□ -1.95
CDC42BPA-207ENST00000441725 MYL12BO14950 172 aa2.88□□□□□ -1.95
CDC42BPA-207ENST00000441725 RER1O15258 196 aa2.88□□□□□ -1.95
CDC42BPA-207ENST00000441725 GSTZ1O43708 216 aaPredicted RBP2.88□□□□□ -1.95
CDC42BPA-207ENST00000441725 TNFP01375 233 aa2.88□□□□□ -1.95
CDC42BPA-207ENST00000441725 BGLAPP02818 100 aa2.88□□□□□ -1.95
CDC42BPA-207ENST00000441725 INAFM2P0DMQ5 153 aa2.88□□□□□ -1.95
CDC42BPA-207ENST00000441725 NUDT2P50583 147 aa2.88□□□□□ -1.95
CDC42BPA-207ENST00000441725 PPP1CAP62136 330 aa2.88□□□□□ -1.95
CDC42BPA-207ENST00000441725 RTL8BQ17RB0 113 aa2.88□□□□□ -1.95
CDC42BPA-207ENST00000441725 C6orf99Q4VX62 202 aa2.88□□□□□ -1.95
CDC42BPA-207ENST00000441725 Q6Q795 121 aa2.88□□□□□ -1.95
CDC42BPA-207ENST00000441725 Q6ZTC4 211 aa2.88□□□□□ -1.95
CDC42BPA-207ENST00000441725 RPS19BP1Q86WX3 136 aaKnown RBP2.88□□□□□ -1.95
CDC42BPA-207ENST00000441725 KCNRGQ8N5I3 272 aa2.88□□□□□ -1.95
CDC42BPA-207ENST00000441725 ZIC4Q8N9L1 334 aa2.88□□□□□ -1.95
CDC42BPA-207ENST00000441725 NPBQ8NG41 125 aa2.88□□□□□ -1.95
CDC42BPA-207ENST00000441725 OR4K13Q8NH42 304 aa2.88□□□□□ -1.95
CDC42BPA-207ENST00000441725 C10orf82Q8WW14 230 aa2.88□□□□□ -1.95
CDC42BPA-207ENST00000441725 ELSPBP1Q96BH3 223 aa2.88□□□□□ -1.95
CDC42BPA-207ENST00000441725 PKMYT1Q99640 499 aa2.88□□□□□ -1.95
CDC42BPA-207ENST00000441725 TM2D3Q9BRN9 247 aa2.88□□□□□ -1.95
CDC42BPA-207ENST00000441725 RTL8AQ9BWD3 113 aa2.88□□□□□ -1.95
CDC42BPA-207ENST00000441725 TMEM191AQ9H0A3 160 aa2.88□□□□□ -1.95
CDC42BPA-207ENST00000441725 C11orf68Q9H3H3 251 aaKnown RBP2.88□□□□□ -1.95
CDC42BPA-207ENST00000441725 MARCOQ9UEW3 520 aaPredicted RBP2.88□□□□□ -1.95
CDC42BPA-207ENST00000441725 MRPS16Q9Y3D3 137 aaKnown RBP2.88□□□□□ -1.95
CDC42BPA-207ENST00000441725 DENND4CQ5VZ89 1909 aa2.88□□□□□ -1.95
CDC42BPA-207ENST00000441725 CACNA1BQ00975 2339 aa2.88□□□□□ -1.95
CDC42BPA-207ENST00000441725 KDM6AO15550 1401 aaPredicted RBP2.88□□□□□ -1.95
CDC42BPA-207ENST00000441725 TRPM1Q7Z4N2 1603 aa2.88□□□□□ -1.95
CDC42BPA-207ENST00000441725 CENPFP49454 3210 aa2.88□□□□□ -1.95
CDC42BPA-207ENST00000441725 MUC21A0A0G2JKD1 596 aa2.88□□□□□ -1.95
CDC42BPA-207ENST00000441725 A0A0J9YXV3 536 aa2.88□□□□□ -1.95
CDC42BPA-207ENST00000441725 A0A1W2PP18 115 aa2.88□□□□□ -1.95
CDC42BPA-207ENST00000441725 IZUMO1RA6ND01 250 aa2.88□□□□□ -1.95
CDC42BPA-207ENST00000441725 CD300LBA8K4G0 201 aa2.88□□□□□ -1.95
CDC42BPA-207ENST00000441725 C4orf51C9J302 202 aa2.88□□□□□ -1.95
CDC42BPA-207ENST00000441725 M0R233 179 aa2.88□□□□□ -1.95
CDC42BPA-207ENST00000441725 HRASP01112 189 aa2.88□□□□□ -1.95
CDC42BPA-207ENST00000441725 KRASP01116 189 aa2.88□□□□□ -1.95
CDC42BPA-207ENST00000441725 HES1Q14469 280 aa2.88□□□□□ -1.95
CDC42BPA-207ENST00000441725 LPAL2Q16609 132 aa2.88□□□□□ -1.95
CDC42BPA-207ENST00000441725 ABCA11PQ4W5N1 156 aa2.88□□□□□ -1.95
CDC42BPA-207ENST00000441725 H2AFVQ71UI9 128 aa2.88□□□□□ -1.95
CDC42BPA-207ENST00000441725 WDR86Q86TI4 376 aa2.88□□□□□ -1.95
CDC42BPA-207ENST00000441725 OR52P1PQ8NH57 321 aa2.88□□□□□ -1.95
CDC42BPA-207ENST00000441725 OR5AK2Q8NH90 309 aa2.88□□□□□ -1.95
CDC42BPA-207ENST00000441725 BRK1Q8WUW1 75 aa2.88□□□□□ -1.95
CDC42BPA-207ENST00000441725 RTN4IP1Q8WWV3 396 aaPredicted RBP2.88□□□□□ -1.95
CDC42BPA-207ENST00000441725 YPEL4Q96NS1 127 aa2.88□□□□□ -1.95
CDC42BPA-207ENST00000441725 THTPAQ9BU02 230 aa2.88□□□□□ -1.95
CDC42BPA-207ENST00000441725 MRPL20Q9BYC9 149 aaKnown RBP2.88□□□□□ -1.95
CDC42BPA-207ENST00000441725 PRO3102Q9H379 93 aa2.88□□□□□ -1.95
CDC42BPA-207ENST00000441725 DEC1Q9P2X7 70 aa2.88□□□□□ -1.95
CDC42BPA-207ENST00000441725 RNF11Q9Y3C5 154 aa2.88□□□□□ -1.95
CDC42BPA-207ENST00000441725 MYH8P13535 1937 aa2.88□□□□□ -1.95
CDC42BPA-207ENST00000441725 MIA3Q5JRA6 1907 aa2.88□□□□□ -1.95
CDC42BPA-207ENST00000441725 COL1A2P08123 1366 aa2.88□□□□□ -1.95
CDC42BPA-207ENST00000441725 USP54Q70EL1 1684 aa2.87□□□□□ -1.95
CDC42BPA-207ENST00000441725 OR2T8A6NH00 312 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 113.2 ms