RNA–Protein interactions for RNA: ENST00000439806.6

CPNE1-218, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-218ENST00000439806 IGHV2-70DA0A0C4DH43 119 aa8.27□□□□□ -1.09
CPNE1-218ENST00000439806 NCBP2LA6PVI3 153 aaKnown RBP8.27□□□□□ -1.09
CPNE1-218ENST00000439806 SNURFLB1AK76 121 aa8.27□□□□□ -1.09
CPNE1-218ENST00000439806 K7EIM0 57 aa8.27□□□□□ -1.09
CPNE1-218ENST00000439806 TOX4O94842 621 aa8.27□□□□□ -1.09
CPNE1-218ENST00000439806 SNRPCP09234 159 aaKnown RBP8.27□□□□□ -1.09
CPNE1-218ENST00000439806 RD3LP0DJH9 198 aa8.27□□□□□ -1.09
CPNE1-218ENST00000439806 GP9P14770 177 aa8.27□□□□□ -1.09
CPNE1-218ENST00000439806 TMEM11P17152 192 aa8.27□□□□□ -1.09
CPNE1-218ENST00000439806 CBLN1P23435 193 aa8.27□□□□□ -1.09
CPNE1-218ENST00000439806 MYCNOSP40205 109 aa8.27□□□□□ -1.09
CPNE1-218ENST00000439806 FAM231DQ6ZW35 169 aa8.27□□□□□ -1.09
CPNE1-218ENST00000439806 C5orf17Q8NAS9 161 aa8.27□□□□□ -1.09
CPNE1-218ENST00000439806 NHLRC2Q8NBF2 726 aa8.27□□□□□ -1.09
CPNE1-218ENST00000439806 IGFBPL1Q8WX77 278 aa8.27□□□□□ -1.09
CPNE1-218ENST00000439806 GRAMD2BQ96HH9 432 aa8.27□□□□□ -1.09
CPNE1-218ENST00000439806 Q9H3A6 140 aa8.27□□□□□ -1.09
CPNE1-218ENST00000439806 TMEM14CQ9P0S9 112 aa8.27□□□□□ -1.09
CPNE1-218ENST00000439806 IZUMO1RA6ND01 250 aa8.26□□□□□ -1.09
CPNE1-218ENST00000439806 NPIPB5A8MRT5 1133 aa8.26□□□□□ -1.09
CPNE1-218ENST00000439806 SCGB2A1O75556 95 aa8.26□□□□□ -1.09
CPNE1-218ENST00000439806 TOMM40O96008 361 aa8.26□□□□□ -1.09
CPNE1-218ENST00000439806 MT-ND6P03923 174 aa8.26□□□□□ -1.09
CPNE1-218ENST00000439806 AMY1AP04745 511 aa8.26□□□□□ -1.09
CPNE1-218ENST00000439806 HIST1H1EP10412 219 aaKnown RBP8.26□□□□□ -1.09
CPNE1-218ENST00000439806 ZFP36P26651 326 aaKnown RBP8.26□□□□□ -1.09
CPNE1-218ENST00000439806 MFAP4P55083 255 aa8.26□□□□□ -1.09
CPNE1-218ENST00000439806 TCL1AP56279 114 aa8.26□□□□□ -1.09
CPNE1-218ENST00000439806 LEMD1Q68G75 181 aa8.26□□□□□ -1.09
CPNE1-218ENST00000439806 S100A7AQ86SG5 101 aa8.26□□□□□ -1.09
CPNE1-218ENST00000439806 DYNAPQ8N1N2 210 aa8.26□□□□□ -1.09
CPNE1-218ENST00000439806 GBGT1Q8N5D6 347 aa8.26□□□□□ -1.09
CPNE1-218ENST00000439806 LINC00479Q96M42 142 aa8.26□□□□□ -1.09
CPNE1-218ENST00000439806 ATG101Q9BSB4 218 aa8.26□□□□□ -1.09
CPNE1-218ENST00000439806 SLC25A39Q9BZJ4 359 aaPredicted RBP8.26□□□□□ -1.09
CPNE1-218ENST00000439806 OTORQ9NRC9 128 aa8.26□□□□□ -1.09
CPNE1-218ENST00000439806 C1RLQ9NZP8 487 aa8.26□□□□□ -1.09
CPNE1-218ENST00000439806 SMIM27A0A1W2PRY6 76 aa8.25□□□□□ -1.09
CPNE1-218ENST00000439806 LINC00587B1AMM8 73 aa8.25□□□□□ -1.09
CPNE1-218ENST00000439806 H3BRN7 92 aa8.25□□□□□ -1.09
CPNE1-218ENST00000439806 H3BTX0 84 aa8.25□□□□□ -1.09
CPNE1-218ENST00000439806 C19orf84I3L1E1 186 aa8.25□□□□□ -1.09
CPNE1-218ENST00000439806 GNG7O60262 68 aa8.25□□□□□ -1.09
CPNE1-218ENST00000439806 SPINK4O60575 86 aa8.25□□□□□ -1.09
CPNE1-218ENST00000439806 CRISP2P16562 243 aa8.25□□□□□ -1.09
CPNE1-218ENST00000439806 BRS3P32247 399 aa8.25□□□□□ -1.09
CPNE1-218ENST00000439806 RAB4BP61018 213 aa8.25□□□□□ -1.09
CPNE1-218ENST00000439806 CX3CL1P78423 397 aa8.25□□□□□ -1.09
CPNE1-218ENST00000439806 EBI3Q14213 229 aa8.25□□□□□ -1.09
CPNE1-218ENST00000439806 JOSD1Q15040 202 aaPredicted RBP8.25□□□□□ -1.09
CPNE1-218ENST00000439806 USF2Q15853 346 aaPredicted RBP8.25□□□□□ -1.09
CPNE1-218ENST00000439806 Q56UQ5 140 aa8.25□□□□□ -1.09
CPNE1-218ENST00000439806 PRR27Q6MZM9 219 aa8.25□□□□□ -1.09
CPNE1-218ENST00000439806 ZNF562Q6V9R5 426 aa8.25□□□□□ -1.09
CPNE1-218ENST00000439806 ZNF600Q6ZNG1 722 aa8.25□□□□□ -1.09
CPNE1-218ENST00000439806 Q8N6K4 173 aa8.25□□□□□ -1.09
CPNE1-218ENST00000439806 LINC00469Q8N7U9 141 aa8.25□□□□□ -1.09
CPNE1-218ENST00000439806 OR4F17Q8NGA8 305 aa8.25□□□□□ -1.09
CPNE1-218ENST00000439806 OR5R1Q8NH85 324 aa8.25□□□□□ -1.09
CPNE1-218ENST00000439806 CMTM2Q8TAZ6 248 aa8.25□□□□□ -1.09
CPNE1-218ENST00000439806 TMEM190Q8WZ59 177 aa8.25□□□□□ -1.09
CPNE1-218ENST00000439806 SMIM12Q96EX1 92 aa8.25□□□□□ -1.09
CPNE1-218ENST00000439806 FMC1Q96HJ9 113 aa8.25□□□□□ -1.09
CPNE1-218ENST00000439806 TMEM68Q96MH6 324 aa8.25□□□□□ -1.09
CPNE1-218ENST00000439806 GNB1LQ9BYB4 327 aa8.25□□□□□ -1.09
CPNE1-218ENST00000439806 MRPL27Q9P0M9 148 aaKnown RBP8.25□□□□□ -1.09
CPNE1-218ENST00000439806 NAT8BQ9UHF3 227 aa8.25□□□□□ -1.09
CPNE1-218ENST00000439806 RNF24Q9Y225 148 aa8.25□□□□□ -1.09
CPNE1-218ENST00000439806 LOC400499M0QZD8 3231 aa8.25□□□□□ -1.09
CPNE1-218ENST00000439806 TMEM8BA6NDV4 472 aa8.24□□□□□ -1.09
CPNE1-218ENST00000439806 IGKV1-17P01599 117 aa8.24□□□□□ -1.09
CPNE1-218ENST00000439806 HLA-DQA1P01909 254 aa8.24□□□□□ -1.09
CPNE1-218ENST00000439806 TCRAP04437 139 aa8.24□□□□□ -1.09
CPNE1-218ENST00000439806 FAM106CPP0CH98 169 aa8.24□□□□□ -1.09
CPNE1-218ENST00000439806 UBE2E1P51965 193 aa8.24□□□□□ -1.09
CPNE1-218ENST00000439806 FBLN7Q53RD9 439 aa8.24□□□□□ -1.09
CPNE1-218ENST00000439806 CDPF1Q6NVV7 123 aa8.24□□□□□ -1.09
CPNE1-218ENST00000439806 MRPL54Q6P161 138 aaKnown RBP8.24□□□□□ -1.09
CPNE1-218ENST00000439806 BPIFA4PQ86YQ2 179 aa8.24□□□□□ -1.09
CPNE1-218ENST00000439806 TTC9CQ8N5M4 171 aa8.24□□□□□ -1.09
CPNE1-218ENST00000439806 NUDT10Q8NFP7 164 aa8.24□□□□□ -1.09
CPNE1-218ENST00000439806 RNF125Q96EQ8 232 aa8.24□□□□□ -1.09
CPNE1-218ENST00000439806 NUDT11Q96G61 164 aa8.24□□□□□ -1.09
CPNE1-218ENST00000439806 ZNF48Q96MX3 618 aaPredicted RBP8.24□□□□□ -1.09
CPNE1-218ENST00000439806 GPR82Q96P67 336 aa8.24□□□□□ -1.09
CPNE1-218ENST00000439806 SHANK2-AS3Q9BTD1 123 aa8.24□□□□□ -1.09
CPNE1-218ENST00000439806 BPESC1Q9GZL8 116 aa8.24□□□□□ -1.09
CPNE1-218ENST00000439806 LPAR2Q9HBW0 351 aa8.24□□□□□ -1.09
CPNE1-218ENST00000439806 ZNF331Q9NQX6 463 aaPredicted RBP8.24□□□□□ -1.09
CPNE1-218ENST00000439806 THYN1Q9P016 225 aa8.24□□□□□ -1.09
CPNE1-218ENST00000439806 S4R3C0 116 aa8.24□□□□□ -1.09
CPNE1-218ENST00000439806 IGLV11-55A0A075B6I3 123 aa8.23□□□□□ -1.09
CPNE1-218ENST00000439806 GRIFINA4D1Z8 144 aa8.23□□□□□ -1.09
CPNE1-218ENST00000439806 HLA-DRB1P01911 266 aa8.23□□□□□ -1.09
CPNE1-218ENST00000439806 IL4P05112 153 aa8.23□□□□□ -1.09
CPNE1-218ENST00000439806 TPPP2P59282 170 aa8.23□□□□□ -1.09
CPNE1-218ENST00000439806 SLC35B1P78383 322 aa8.23□□□□□ -1.09
CPNE1-218ENST00000439806 KLF17Q5JT82 389 aaPredicted RBP8.23□□□□□ -1.09
CPNE1-218ENST00000439806 ASPHD1Q5U4P2 390 aa8.23□□□□□ -1.09
CPNE1-218ENST00000439806 TMEM136Q6ZRR5 245 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms