RNA–Protein interactions for RNA: ENST00000439468.1

VPS41-207, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-207ENST00000439468 UMODL1-AS1Q8N2C9 162 aa1.28□□□□□ -2.2
VPS41-207ENST00000439468 OR2T27Q8NH04 317 aa1.28□□□□□ -2.2
VPS41-207ENST00000439468 CXorf21Q9HAI6 301 aa1.28□□□□□ -2.2
VPS41-207ENST00000439468 SPANXB1Q9NS25 103 aaPredicted RBP1.28□□□□□ -2.2
VPS41-207ENST00000439468 ZNHIT6Q9NWK9 470 aaKnown RBP1.28□□□□□ -2.2
VPS41-207ENST00000439468 ANAPC10Q9UM13 185 aa1.28□□□□□ -2.2
VPS41-207ENST00000439468 RBM7Q9Y580 266 aaKnown RBP1.28□□□□□ -2.2
VPS41-207ENST00000439468 FAM215AQ9Y5M1 114 aa1.28□□□□□ -2.2
VPS41-207ENST00000439468 KMT2AQ03164 3969 aa1.28□□□□□ -2.2
VPS41-207ENST00000439468 MDC1Q14676 2089 aaKnown RBP1.28□□□□□ -2.2
VPS41-207ENST00000439468 DNAH7Q8WXX0 4024 aa1.27□□□□□ -2.21
VPS41-207ENST00000439468 DNAH9Q9NYC9 4486 aa1.27□□□□□ -2.21
VPS41-207ENST00000439468 TMSB15BA0A087X1C1 80 aa1.27□□□□□ -2.21
VPS41-207ENST00000439468 A0A0A6YYH2 397 aa1.27□□□□□ -2.21
VPS41-207ENST00000439468 TRGV5A0A0B4J1U4 118 aa1.27□□□□□ -2.21
VPS41-207ENST00000439468 A6NJ64 397 aa1.27□□□□□ -2.21
VPS41-207ENST00000439468 C9JCJ5 164 aa1.27□□□□□ -2.21
VPS41-207ENST00000439468 CXCR6O00574 342 aa1.27□□□□□ -2.21
VPS41-207ENST00000439468 BHLHE40O14503 412 aa1.27□□□□□ -2.21
VPS41-207ENST00000439468 COX7A2LO14548 114 aa1.27□□□□□ -2.21
VPS41-207ENST00000439468 MAP2K4P45985 399 aa1.27□□□□□ -2.21
VPS41-207ENST00000439468 RPL27AP46776 148 aaKnown RBP1.27□□□□□ -2.21
VPS41-207ENST00000439468 RBM11P57052 281 aaKnown RBP1.27□□□□□ -2.21
VPS41-207ENST00000439468 ZNF90Q03938 601 aa1.27□□□□□ -2.21
VPS41-207ENST00000439468 MED21Q13503 144 aa1.27□□□□□ -2.21
VPS41-207ENST00000439468 C1orf194Q5T5A4 169 aa1.27□□□□□ -2.21
VPS41-207ENST00000439468 C1orf195Q5TG92 126 aa1.27□□□□□ -2.21
VPS41-207ENST00000439468 SBSNQ6UWP8 590 aa1.27□□□□□ -2.21
VPS41-207ENST00000439468 SLC35E3Q7Z769 313 aa1.27□□□□□ -2.21
VPS41-207ENST00000439468 LRRC28Q86X40 367 aaPredicted RBP1.27□□□□□ -2.21
VPS41-207ENST00000439468 Q8N402 240 aa1.27□□□□□ -2.21
VPS41-207ENST00000439468 OR13C8Q8NGS7 320 aa1.27□□□□□ -2.21
VPS41-207ENST00000439468 SMCR5Q8TEV8 140 aa1.27□□□□□ -2.21
VPS41-207ENST00000439468 MRPS24Q96EL2 167 aaKnown RBP1.27□□□□□ -2.21
VPS41-207ENST00000439468 NDUFB11Q9NX14 153 aa1.27□□□□□ -2.21
VPS41-207ENST00000439468 TAAR3PQ9P1P4 343 aa1.27□□□□□ -2.21
VPS41-207ENST00000439468 SORL1Q92673 2214 aa1.27□□□□□ -2.21
VPS41-207ENST00000439468 STAB2Q8WWQ8 2551 aa1.26□□□□□ -2.21
VPS41-207ENST00000439468 DNAH3Q8TD57 4116 aa1.26□□□□□ -2.21
VPS41-207ENST00000439468 IGLV3-9A0A075B6K5 115 aa1.26□□□□□ -2.21
VPS41-207ENST00000439468 TLCD2A6NGC4 264 aa1.26□□□□□ -2.21
VPS41-207ENST00000439468 C2orf74A8MZ97 194 aa1.26□□□□□ -2.21
VPS41-207ENST00000439468 C21orf140B9A014 251 aa1.26□□□□□ -2.21
VPS41-207ENST00000439468 SSNA1O43805 119 aa1.26□□□□□ -2.21
VPS41-207ENST00000439468 TNFSF15O95150 251 aa1.26□□□□□ -2.21
VPS41-207ENST00000439468 NDUFB2O95178 105 aa1.26□□□□□ -2.21
VPS41-207ENST00000439468 DEXIO95424 95 aa1.26□□□□□ -2.21
VPS41-207ENST00000439468 ERHP84090 104 aaKnown RBP1.26□□□□□ -2.21
VPS41-207ENST00000439468 UAP1Q16222 522 aaPredicted RBP1.26□□□□□ -2.21
VPS41-207ENST00000439468 SLC36A2Q495M3 483 aa1.26□□□□□ -2.21
VPS41-207ENST00000439468 OR10K2Q6IF99 312 aa1.26□□□□□ -2.21
VPS41-207ENST00000439468 SGMS2Q8NHU3 365 aa1.26□□□□□ -2.21
VPS41-207ENST00000439468 ZNF675Q8TD23 568 aa1.26□□□□□ -2.21
VPS41-207ENST00000439468 GNPNAT1Q96EK6 184 aaPredicted RBP1.26□□□□□ -2.21
VPS41-207ENST00000439468 CCL13Q99616 98 aa1.26□□□□□ -2.21
VPS41-207ENST00000439468 KRTAP4-1Q9BYQ7 146 aa1.26□□□□□ -2.21
VPS41-207ENST00000439468 HES4Q9HCC6 221 aa1.26□□□□□ -2.21
VPS41-207ENST00000439468 NKIRAS1Q9NYS0 192 aa1.26□□□□□ -2.21
VPS41-207ENST00000439468 HHLA3Q9XRX5 114 aa1.26□□□□□ -2.21
VPS41-207ENST00000439468 POLR1DQ9Y2S0 133 aa1.26□□□□□ -2.21
VPS41-207ENST00000439468 KLK5Q9Y337 293 aaPredicted RBP1.26□□□□□ -2.21
VPS41-207ENST00000439468 U3KQA8 63 aa1.26□□□□□ -2.21
VPS41-207ENST00000439468 ABCA1O95477 2261 aa1.26□□□□□ -2.21
VPS41-207ENST00000439468 TMEM269A0A1B0GVZ9 245 aa1.25□□□□□ -2.21
VPS41-207ENST00000439468 PGLYRP1O75594 196 aaPredicted RBP1.25□□□□□ -2.21
VPS41-207ENST00000439468 APOMO95445 188 aa1.25□□□□□ -2.21
VPS41-207ENST00000439468 IL3P08700 152 aa1.25□□□□□ -2.21
VPS41-207ENST00000439468 C8orf88P0DMB2 117 aa1.25□□□□□ -2.21
VPS41-207ENST00000439468 RAP1GDS1P52306 607 aa1.25□□□□□ -2.21
VPS41-207ENST00000439468 SLC38A11Q08AI6 406 aa1.25□□□□□ -2.21
VPS41-207ENST00000439468 PRDX4Q13162 271 aa1.25□□□□□ -2.21
VPS41-207ENST00000439468 LRRC75BQ2VPJ9 315 aa1.25□□□□□ -2.21
VPS41-207ENST00000439468 PLPPR5Q32ZL2 321 aa1.25□□□□□ -2.21
VPS41-207ENST00000439468 ZNF791Q3KP31 576 aaPredicted RBP1.25□□□□□ -2.21
VPS41-207ENST00000439468 TNFAIP8L2Q6P589 184 aaPredicted RBP1.25□□□□□ -2.21
VPS41-207ENST00000439468 Q6ZRN7 208 aaPredicted RBP1.25□□□□□ -2.21
VPS41-207ENST00000439468 SLC51BQ86UW2 128 aa1.25□□□□□ -2.21
VPS41-207ENST00000439468 OR51D1Q8NGF3 324 aa1.25□□□□□ -2.21
VPS41-207ENST00000439468 FGFR1OP2Q9NVK5 253 aa1.25□□□□□ -2.21
VPS41-207ENST00000439468 INTS1Q8N201 2190 aaKnown RBP1.25□□□□□ -2.21
VPS41-207ENST00000439468 HUWE1Q7Z6Z7 4374 aaKnown RBP1.25□□□□□ -2.21
VPS41-207ENST00000439468 CPAMD8Q8IZJ3 1885 aa1.24□□□□□ -2.21
VPS41-207ENST00000439468 UNC13CQ8NB66 2214 aa1.24□□□□□ -2.21
VPS41-207ENST00000439468 STARD9Q9P2P6 4700 aa1.24□□□□□ -2.21
VPS41-207ENST00000439468 TRAV41A0A0B4J266 112 aa1.24□□□□□ -2.21
VPS41-207ENST00000439468 A8MUN3 132 aa1.24□□□□□ -2.21
VPS41-207ENST00000439468 NPYP01303 97 aa1.24□□□□□ -2.21
VPS41-207ENST00000439468 OCM2P0CE71 109 aa1.24□□□□□ -2.21
VPS41-207ENST00000439468 CD24P25063 80 aa1.24□□□□□ -2.21
VPS41-207ENST00000439468 CA5AP35218 305 aa1.24□□□□□ -2.21
VPS41-207ENST00000439468 SLCO1A2P46721 670 aa1.24□□□□□ -2.21
VPS41-207ENST00000439468 HSP90B2PQ58FF3 399 aa1.24□□□□□ -2.21
VPS41-207ENST00000439468 LRRN1Q6UXK5 716 aa1.24□□□□□ -2.21
VPS41-207ENST00000439468 HIST2H3AQ71DI3 136 aa1.24□□□□□ -2.21
VPS41-207ENST00000439468 OR5J2Q8NH18 312 aa1.24□□□□□ -2.21
VPS41-207ENST00000439468 PIGXQ8TBF5 258 aa1.24□□□□□ -2.21
VPS41-207ENST00000439468 RAB8BQ92930 207 aa1.24□□□□□ -2.21
VPS41-207ENST00000439468 TESCQ96BS2 214 aa1.24□□□□□ -2.21
VPS41-207ENST00000439468 IMMP2LQ96T52 175 aa1.24□□□□□ -2.21
VPS41-207ENST00000439468 TMEM222Q9H0R3 208 aa1.24□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms