RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 RNF182Q8N6D2 247 aa13.1□□□□□ -0.31
PTPN13-204ENST00000436978 RNF126Q9BV68 326 aa13.1□□□□□ -0.31
PTPN13-204ENST00000436978 GNB1LQ9BYB4 327 aa13.1□□□□□ -0.31
PTPN13-204ENST00000436978 TOMM7Q9P0U1 55 aa13.1□□□□□ -0.31
PTPN13-204ENST00000436978 TTC9CQ8N5M4 171 aa13.09□□□□□ -0.31
PTPN13-204ENST00000436978 POLEQ07864 2286 aa13.09□□□□□ -0.31
PTPN13-204ENST00000436978 CHD3Q12873 2000 aaKnown RBP13.09□□□□□ -0.31
PTPN13-204ENST00000436978 RNASE7Q9H1E1 156 aaKnown RBP13.09□□□□□ -0.31
PTPN13-204ENST00000436978 PSG8Q9UQ74 426 aa13.09□□□□□ -0.31
PTPN13-204ENST00000436978 MSRB2Q9Y3D2 182 aa13.09□□□□□ -0.31
PTPN13-204ENST00000436978 RNF222A6NCQ9 220 aa13.09□□□□□ -0.31
PTPN13-204ENST00000436978 BUB1B-PAK6H3BSN5 160 aa13.09□□□□□ -0.31
PTPN13-204ENST00000436978 PRB3Q04118 309 aaPredicted RBP13.09□□□□□ -0.31
PTPN13-204ENST00000436978 TEX38Q6PEX7 206 aa13.09□□□□□ -0.31
PTPN13-204ENST00000436978 PARD6GQ9BYG4 376 aaPredicted RBP13.08□□□□□ -0.31
PTPN13-204ENST00000436978 TRBV6-6A0A0A6YYG2 114 aa13.08□□□□□ -0.32
PTPN13-204ENST00000436978 F8VVB4 439 aa13.08□□□□□ -0.32
PTPN13-204ENST00000436978 F8VWA3 439 aa13.08□□□□□ -0.32
PTPN13-204ENST00000436978 MUC21Q5SSG8 566 aa13.08□□□□□ -0.32
PTPN13-204ENST00000436978 OBSL1O75147 1896 aa13.08□□□□□ -0.32
PTPN13-204ENST00000436978 RPL23P62829 140 aaKnown RBP13.08□□□□□ -0.32
PTPN13-204ENST00000436978 CHCHD1Q96BP2 118 aaKnown RBP13.08□□□□□ -0.32
PTPN13-204ENST00000436978 SEPSECSQ9HD40 501 aaKnown RBP13.08□□□□□ -0.32
PTPN13-204ENST00000436978 COL4A6Q14031 1691 aa13.08□□□□□ -0.32
PTPN13-204ENST00000436978 STAG3L3P0CL85 134 aa13.08□□□□□ -0.32
PTPN13-204ENST00000436978 PGPEP1Q9NXJ5 209 aa13.08□□□□□ -0.32
PTPN13-204ENST00000436978 A8MXK9 166 aa13.08□□□□□ -0.32
PTPN13-204ENST00000436978 IGHG3P01860 377 aa13.08□□□□□ -0.32
PTPN13-204ENST00000436978 MTURNQ8N3F0 131 aa13.08□□□□□ -0.32
PTPN13-204ENST00000436978 PAQR4Q8N4S7 273 aaPredicted RBP13.08□□□□□ -0.32
PTPN13-204ENST00000436978 Q6ZS92 163 aa13.07□□□□□ -0.32
PTPN13-204ENST00000436978 CD33P20138 364 aa13.07□□□□□ -0.32
PTPN13-204ENST00000436978 OR9G4Q8NGQ1 327 aa13.07□□□□□ -0.32
PTPN13-204ENST00000436978 RNF114Q9Y508 228 aa13.07□□□□□ -0.32
PTPN13-204ENST00000436978 CD55P08174 381 aa13.07□□□□□ -0.32
PTPN13-204ENST00000436978 BTCP35070 178 aa13.07□□□□□ -0.32
PTPN13-204ENST00000436978 PNRC2Q9NPJ4 139 aaKnown RBP13.07□□□□□ -0.32
PTPN13-204ENST00000436978 ZNF319Q9P2F9 582 aa13.07□□□□□ -0.32
PTPN13-204ENST00000436978 IFITM2Q01629 132 aa13.07□□□□□ -0.32
PTPN13-204ENST00000436978 TMEM155Q4W5P6 130 aa13.07□□□□□ -0.32
PTPN13-204ENST00000436978 LOC102724200A0A096LPH7 203 aaPredicted RBP13.07□□□□□ -0.32
PTPN13-204ENST00000436978 MLNRO43193 412 aa13.07□□□□□ -0.32
PTPN13-204ENST00000436978 HBDP02042 147 aa13.07□□□□□ -0.32
PTPN13-204ENST00000436978 ZNF362Q5T0B9 420 aaPredicted RBP13.07□□□□□ -0.32
PTPN13-204ENST00000436978 SLC25A39Q9BZJ4 359 aaPredicted RBP13.07□□□□□ -0.32
PTPN13-204ENST00000436978 ZNF415Q09FC8 603 aa13.06□□□□□ -0.32
PTPN13-204ENST00000436978 H0YJW9 148 aa13.06□□□□□ -0.32
PTPN13-204ENST00000436978 C1QTNF4Q9BXJ3 329 aa13.06□□□□□ -0.32
PTPN13-204ENST00000436978 MUC21A0A0G2JKD1 596 aa13.06□□□□□ -0.32
PTPN13-204ENST00000436978 MUC21A0A140T8X8 626 aa13.06□□□□□ -0.32
PTPN13-204ENST00000436978 ID3Q02535 119 aa13.06□□□□□ -0.32
PTPN13-204ENST00000436978 UBE2DNLQ8IWF7 75 aa13.06□□□□□ -0.32
PTPN13-204ENST00000436978 COQ2Q96H96 371 aa13.06□□□□□ -0.32
PTPN13-204ENST00000436978 DPM2O94777 84 aa13.06□□□□□ -0.32
PTPN13-204ENST00000436978 OR10W1Q8NGF6 305 aa13.06□□□□□ -0.32
PTPN13-204ENST00000436978 GAFA1Q96PS6 74 aa13.05□□□□□ -0.32
PTPN13-204ENST00000436978 MST1P26927 711 aa13.05□□□□□ -0.32
PTPN13-204ENST00000436978 C5orf64Q2M2E5 130 aa13.05□□□□□ -0.32
PTPN13-204ENST00000436978 CD177Q8N6Q3 437 aa13.05□□□□□ -0.32
PTPN13-204ENST00000436978 BMPERQ8N8U9 685 aa13.05□□□□□ -0.32
PTPN13-204ENST00000436978 NACAE9PAV3 2078 aa13.05□□□□□ -0.32
PTPN13-204ENST00000436978 ADARB2-AS1A8MUL3 147 aa13.05□□□□□ -0.32
PTPN13-204ENST00000436978 TFF1P04155 84 aa13.05□□□□□ -0.32
PTPN13-204ENST00000436978 NR2C2APQ86WQ0 139 aa13.05□□□□□ -0.32
PTPN13-204ENST00000436978 PRR32B1ATL7 298 aa13.05□□□□□ -0.32
PTPN13-204ENST00000436978 KIR3DL3Q8N743 410 aa13.05□□□□□ -0.32
PTPN13-204ENST00000436978 TSKUQ8WUA8 353 aa13.05□□□□□ -0.32
PTPN13-204ENST00000436978 RASL11AQ6T310 242 aa13.05□□□□□ -0.32
PTPN13-204ENST00000436978 PYYP10082 97 aa13.05□□□□□ -0.32
PTPN13-204ENST00000436978 TMEM219Q86XT9 240 aa13.05□□□□□ -0.32
PTPN13-204ENST00000436978 CD28P10747 220 aa13.05□□□□□ -0.32
PTPN13-204ENST00000436978 CRIM1Q9NZV1 1036 aa13.05□□□□□ -0.32
PTPN13-204ENST00000436978 A0A1B0GWJ7 208 aa13.04□□□□□ -0.32
PTPN13-204ENST00000436978 RNF166Q96A37 237 aaPredicted RBP13.04□□□□□ -0.32
PTPN13-204ENST00000436978 IGKV1-27A0A075B6S5 117 aa13.04□□□□□ -0.32
PTPN13-204ENST00000436978 EFNA2O43921 213 aa13.04□□□□□ -0.32
PTPN13-204ENST00000436978 LAGE3Q14657 143 aa13.04□□□□□ -0.32
PTPN13-204ENST00000436978 LINC00477Q96M19 166 aa13.04□□□□□ -0.32
PTPN13-204ENST00000436978 K7ENP7 123 aa13.03□□□□□ -0.32
PTPN13-204ENST00000436978 B3GALT5-AS1P59052 145 aa13.03□□□□□ -0.32
PTPN13-204ENST00000436978 TMEM170AQ8WVE7 144 aa13.03□□□□□ -0.32
PTPN13-204ENST00000436978 GFI1Q99684 422 aa13.03□□□□□ -0.32
PTPN13-204ENST00000436978 CHTOPQ9Y3Y2 248 aaKnown RBP13.03□□□□□ -0.32
PTPN13-204ENST00000436978 TREML4Q6UXN2 200 aa13.03□□□□□ -0.32
PTPN13-204ENST00000436978 KLRD1Q13241 179 aa13.03□□□□□ -0.32
PTPN13-204ENST00000436978 C10orf126Q8N4M7 172 aa13.03□□□□□ -0.32
PTPN13-204ENST00000436978 IGKV1-12A0A0C4DH73 117 aa13.03□□□□□ -0.32
PTPN13-204ENST00000436978 H3BUX3 64 aa13.03□□□□□ -0.32
PTPN13-204ENST00000436978 IGKV1D-12P01611 117 aa13.03□□□□□ -0.32
PTPN13-204ENST00000436978 TMEM86BQ8N661 226 aa13.03□□□□□ -0.32
PTPN13-204ENST00000436978 FNDC10F2Z333 226 aa13.03□□□□□ -0.32
PTPN13-204ENST00000436978 INSP01308 110 aa13.03□□□□□ -0.32
PTPN13-204ENST00000436978 PLNP26678 52 aa13.03□□□□□ -0.32
PTPN13-204ENST00000436978 C9orf139Q6ZV77 190 aa13.03□□□□□ -0.32
PTPN13-204ENST00000436978 TOMM40O96008 361 aa13.02□□□□□ -0.32
PTPN13-204ENST00000436978 ADMP35318 185 aa13.02□□□□□ -0.32
PTPN13-204ENST00000436978 RCHY1Q96PM5 261 aa13.02□□□□□ -0.32
PTPN13-204ENST00000436978 NAPSAO96009 420 aa13.02□□□□□ -0.32
PTPN13-204ENST00000436978 PGPEP1LA6NFU8 196 aa13.02□□□□□ -0.33
PTPN13-204ENST00000436978 LINC00614P0C842 121 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 127.6 ms