RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 NUP35Q8NFH5 326 aa9.47□□□□□ -0.89
CD44-209ENST00000433892 MBD6Q96DN6 1003 aa9.47□□□□□ -0.89
CD44-209ENST00000433892 TMEM68Q96MH6 324 aa9.47□□□□□ -0.89
CD44-209ENST00000433892 RPH3ALQ9UNE2 315 aa9.47□□□□□ -0.89
CD44-209ENST00000433892 MALRD1Q5VYJ5 2156 aa9.46□□□□□ -0.89
CD44-209ENST00000433892 PGPA6NDG6 321 aa9.46□□□□□ -0.9
CD44-209ENST00000433892 LYNX1G3V0Z9 82 aa9.46□□□□□ -0.9
CD44-209ENST00000433892 TCAPO15273 167 aa9.46□□□□□ -0.9
CD44-209ENST00000433892 SLC25A5P05141 298 aaKnown RBP9.46□□□□□ -0.9
CD44-209ENST00000433892 LYNX1P0DP58 116 aa9.46□□□□□ -0.9
CD44-209ENST00000433892 MYCNOSP40205 109 aa9.46□□□□□ -0.9
CD44-209ENST00000433892 LEMD1Q68G75 181 aa9.46□□□□□ -0.9
CD44-209ENST00000433892 FAM231DQ6ZW35 169 aa9.46□□□□□ -0.9
CD44-209ENST00000433892 FAM19A2Q8N3H0 131 aa9.46□□□□□ -0.9
CD44-209ENST00000433892 PERPQ96FX8 193 aa9.46□□□□□ -0.9
CD44-209ENST00000433892 C20orf144Q9BQM9 153 aa9.46□□□□□ -0.9
CD44-209ENST00000433892 SVEP1Q4LDE5 3571 aa9.46□□□□□ -0.9
CD44-209ENST00000433892 MUC6Q6W4X9 2439 aa9.46□□□□□ -0.9
CD44-209ENST00000433892 DIRC3C9JPN6 131 aa9.45□□□□□ -0.9
CD44-209ENST00000433892 H3BTX0 84 aa9.45□□□□□ -0.9
CD44-209ENST00000433892 CORTO00230 105 aa9.45□□□□□ -0.9
CD44-209ENST00000433892 RPL27AP46776 148 aaKnown RBP9.45□□□□□ -0.9
CD44-209ENST00000433892 UBE2G1P62253 170 aa9.45□□□□□ -0.9
CD44-209ENST00000433892 GDF5OSQ5U4N7 250 aa9.45□□□□□ -0.9
CD44-209ENST00000433892 GRAMD2BQ96HH9 432 aa9.45□□□□□ -0.9
CD44-209ENST00000433892 MIEN1Q9BRT3 115 aa9.45□□□□□ -0.9
CD44-209ENST00000433892 GSX1Q9H4S2 264 aaPredicted RBP9.45□□□□□ -0.9
CD44-209ENST00000433892 EPDR1Q9UM22 224 aa9.45□□□□□ -0.9
CD44-209ENST00000433892 IGHV2-26A0A0B4J1V2 119 aa9.45□□□□□ -0.9
CD44-209ENST00000433892 ZNF324O75467 553 aaPredicted RBP9.45□□□□□ -0.9
CD44-209ENST00000433892 CRYGCP07315 174 aa9.45□□□□□ -0.9
CD44-209ENST00000433892 NBEAP1P0C6P0 100 aa9.45□□□□□ -0.9
CD44-209ENST00000433892 ETFRF1Q6IPR1 90 aa9.45□□□□□ -0.9
CD44-209ENST00000433892 Q8N976 141 aa9.45□□□□□ -0.9
CD44-209ENST00000433892 TEX45Q8NA69 505 aa9.45□□□□□ -0.9
CD44-209ENST00000433892 HIGD1CA8MV81 97 aa9.44□□□□□ -0.9
CD44-209ENST00000433892 FAM87AP0C7U9 286 aa9.44□□□□□ -0.9
CD44-209ENST00000433892 PRR31Q5SQ13 230 aa9.44□□□□□ -0.9
CD44-209ENST00000433892 SPACA3Q8IXA5 215 aa9.44□□□□□ -0.9
CD44-209ENST00000433892 STXBP6Q8NFX7 210 aa9.44□□□□□ -0.9
CD44-209ENST00000433892 TSKUQ8WUA8 353 aa9.44□□□□□ -0.9
CD44-209ENST00000433892 NEU1Q99519 415 aa9.44□□□□□ -0.9
CD44-209ENST00000433892 SSBP4Q9BWG4 385 aaPredicted RBP9.44□□□□□ -0.9
CD44-209ENST00000433892 NGBQ9NPG2 151 aa9.44□□□□□ -0.9
CD44-209ENST00000433892 SIGLEC9Q9Y336 463 aa9.44□□□□□ -0.9
CD44-209ENST00000433892 INSIG2Q9Y5U4 225 aa9.44□□□□□ -0.9
CD44-209ENST00000433892 ASH1LQ9NR48 2969 aaKnown RBP9.44□□□□□ -0.9
CD44-209ENST00000433892 VWC2LB2RUY7 222 aa9.44□□□□□ -0.9
CD44-209ENST00000433892 HYPMO75409 117 aa9.44□□□□□ -0.9
CD44-209ENST00000433892 HIST1H1EP10412 219 aaKnown RBP9.44□□□□□ -0.9
CD44-209ENST00000433892 NTF3P20783 257 aa9.44□□□□□ -0.9
CD44-209ENST00000433892 GPR6P46095 362 aaPredicted RBP9.44□□□□□ -0.9
CD44-209ENST00000433892 CAMPP49913 170 aa9.44□□□□□ -0.9
CD44-209ENST00000433892 TMEM116Q8NCL8 245 aa9.44□□□□□ -0.9
CD44-209ENST00000433892 C18orf32Q8TCD1 76 aa9.44□□□□□ -0.9
CD44-209ENST00000433892 WIPF2Q8TF74 440 aaPredicted RBP9.44□□□□□ -0.9
CD44-209ENST00000433892 C22orf15Q8WYQ4 148 aa9.44□□□□□ -0.9
CD44-209ENST00000433892 TRGV9Q99603 122 aa9.44□□□□□ -0.9
CD44-209ENST00000433892 C7orf69Q9H7B7 122 aa9.44□□□□□ -0.9
CD44-209ENST00000433892 RALYQ9UKM9 306 aaKnown RBP9.44□□□□□ -0.9
CD44-209ENST00000433892 ZNF835Q9Y2P0 537 aa9.44□□□□□ -0.9
CD44-209ENST00000433892 IGHV1-3A0A0C4DH29 117 aa9.43□□□□□ -0.9
CD44-209ENST00000433892 IGLV1-47P01700 117 aa9.43□□□□□ -0.9
CD44-209ENST00000433892 SPTA1P02549 2419 aa9.43□□□□□ -0.9
CD44-209ENST00000433892 CRYGBP07316 175 aa9.43□□□□□ -0.9
CD44-209ENST00000433892 PVRIGQ6DKI7 326 aa9.43□□□□□ -0.9
CD44-209ENST00000433892 NIT1Q86X76 327 aa9.43□□□□□ -0.9
CD44-209ENST00000433892 COX7A1P24310 79 aa9.43□□□□□ -0.9
CD44-209ENST00000433892 APOBEC3AP31941 199 aaPredicted RBP9.43□□□□□ -0.9
CD44-209ENST00000433892 RASL11AQ6T310 242 aa9.43□□□□□ -0.9
CD44-209ENST00000433892 LINC00322Q6ZN03 302 aaPredicted RBP9.43□□□□□ -0.9
CD44-209ENST00000433892 SSX8Q7RTT4 187 aa9.43□□□□□ -0.9
CD44-209ENST00000433892 PPP1R27Q86WC6 154 aa9.43□□□□□ -0.9
CD44-209ENST00000433892 GPR82Q96P67 336 aa9.43□□□□□ -0.9
CD44-209ENST00000433892 KLF12Q9Y4X4 402 aa9.43□□□□□ -0.9
CD44-209ENST00000433892 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.42□□□□□ -0.9
CD44-209ENST00000433892 BUB1B-PAK6H3BSN5 160 aa9.42□□□□□ -0.9
CD44-209ENST00000433892 C3orf79P0CE67 100 aa9.42□□□□□ -0.9
CD44-209ENST00000433892 GP9P14770 177 aa9.42□□□□□ -0.9
CD44-209ENST00000433892 G0S2P27469 103 aa9.42□□□□□ -0.9
CD44-209ENST00000433892 PRRX1P54821 245 aa9.42□□□□□ -0.9
CD44-209ENST00000433892 CASP6P55212 293 aa9.42□□□□□ -0.9
CD44-209ENST00000433892 TCF24Q7RTU0 167 aa9.42□□□□□ -0.9
CD44-209ENST00000433892 FBXL15Q9H469 300 aa9.42□□□□□ -0.9
CD44-209ENST00000433892 ANKHD1Q8IWZ3 2542 aaKnown RBP9.42□□□□□ -0.9
CD44-209ENST00000433892 ABCA4P78363 2273 aa9.42□□□□□ -0.9
CD44-209ENST00000433892 TEX22C9J3V5 150 aa9.42□□□□□ -0.9
CD44-209ENST00000433892 OR4B1Q8NGF8 309 aa9.42□□□□□ -0.9
CD44-209ENST00000433892 C8orf46Q8TAG6 207 aa9.42□□□□□ -0.9
CD44-209ENST00000433892 TNFRSF14Q92956 283 aa9.42□□□□□ -0.9
CD44-209ENST00000433892 CHRDL1Q9BU40 450 aa9.42□□□□□ -0.9
CD44-209ENST00000433892 F11RQ9Y624 299 aaKnown RBP9.42□□□□□ -0.9
CD44-209ENST00000433892 B9A039 149 aa9.41□□□□□ -0.9
CD44-209ENST00000433892 OR2D3Q8NGH3 330 aa9.41□□□□□ -0.9
CD44-209ENST00000433892 MLST8Q9BVC4 326 aa9.41□□□□□ -0.9
CD44-209ENST00000433892 CLEC7AQ9BXN2 247 aa9.41□□□□□ -0.9
CD44-209ENST00000433892 WNT10AQ9GZT5 417 aa9.41□□□□□ -0.9
CD44-209ENST00000433892 Q9H3A6 140 aa9.41□□□□□ -0.9
CD44-209ENST00000433892 CD3EP07766 207 aa9.4□□□□□ -0.9
CD44-209ENST00000433892 PSG1P11464 419 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms