RNA–Protein interactions for RNA: ENST00000429762.7

VSX1-205, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-205ENST00000429762 TRBV9A0A0B4J1U6 114 aa17.23■□□□□ 0.35
VSX1-205ENST00000429762 OR7C2O60412 319 aa17.23■□□□□ 0.35
VSX1-205ENST00000429762 OR10J4P0C629 311 aa17.23■□□□□ 0.35
VSX1-205ENST00000429762 RD3LP0DJH9 198 aa17.23■□□□□ 0.35
VSX1-205ENST00000429762 CRIP2P52943 208 aaPredicted RBP17.23■□□□□ 0.35
VSX1-205ENST00000429762 CD81P60033 236 aa17.23■□□□□ 0.35
VSX1-205ENST00000429762 LINC00305Q7Z4B0 112 aa17.23■□□□□ 0.35
VSX1-205ENST00000429762 OR5R1Q8NH85 324 aa17.23■□□□□ 0.35
VSX1-205ENST00000429762 PFDN5Q99471 154 aa17.23■□□□□ 0.35
VSX1-205ENST00000429762 MANBALQ9NQG1 85 aa17.23■□□□□ 0.35
VSX1-205ENST00000429762 VPREB3Q9UKI3 123 aa17.23■□□□□ 0.35
VSX1-205ENST00000429762 IGF1P05019 195 aa17.22■□□□□ 0.35
VSX1-205ENST00000429762 ATP5G3P48201 142 aa17.22■□□□□ 0.35
VSX1-205ENST00000429762 SNRPCP09234 159 aaKnown RBP17.22■□□□□ 0.35
VSX1-205ENST00000429762 C8orf88P0DMB2 117 aa17.22■□□□□ 0.35
VSX1-205ENST00000429762 CST9LP1Q5W188 147 aa17.22■□□□□ 0.35
VSX1-205ENST00000429762 OR5AU1Q8NGC0 362 aa17.22■□□□□ 0.35
VSX1-205ENST00000429762 FAM167A-AS1Q96KT0 104 aa17.22■□□□□ 0.35
VSX1-205ENST00000429762 C19orf24Q9BVV8 132 aa17.22■□□□□ 0.35
VSX1-205ENST00000429762 MRPL32Q9BYC8 188 aaKnown RBP17.22■□□□□ 0.35
VSX1-205ENST00000429762 ACANP16112 2415 aa17.21■□□□□ 0.35
VSX1-205ENST00000429762 CD5LO43866 347 aa17.21■□□□□ 0.35
VSX1-205ENST00000429762 HYPMO75409 117 aa17.21■□□□□ 0.35
VSX1-205ENST00000429762 SRP14P37108 136 aaKnown RBP17.21■□□□□ 0.35
VSX1-205ENST00000429762 MEF2BQ02080 365 aaPredicted RBP17.21■□□□□ 0.35
VSX1-205ENST00000429762 PMS2P11Q13670 270 aa17.21■□□□□ 0.35
VSX1-205ENST00000429762 LEMD1Q68G75 181 aa17.21■□□□□ 0.35
VSX1-205ENST00000429762 OR51G1Q8NGK1 321 aa17.21■□□□□ 0.35
VSX1-205ENST00000429762 OR4F5Q8NH21 305 aa17.21■□□□□ 0.35
VSX1-205ENST00000429762 OR4F4Q96R69 305 aa17.21■□□□□ 0.35
VSX1-205ENST00000429762 CHRDL1Q9BU40 450 aa17.21■□□□□ 0.35
VSX1-205ENST00000429762 SMDT1Q9H4I9 107 aa17.21■□□□□ 0.35
VSX1-205ENST00000429762 YTHDF2Q9Y5A9 579 aaKnown RBP17.21■□□□□ 0.35
VSX1-205ENST00000429762 IGHV3-35A0A0C4DH35 117 aa17.2■□□□□ 0.34
VSX1-205ENST00000429762 PYYP10082 97 aa17.2■□□□□ 0.34
VSX1-205ENST00000429762 GPR183P32249 361 aa17.2■□□□□ 0.34
VSX1-205ENST00000429762 SOHLH1Q5JUK2 328 aa17.2■□□□□ 0.34
VSX1-205ENST00000429762 LCNL1Q6ZST4 164 aa17.2■□□□□ 0.34
VSX1-205ENST00000429762 ZNF502Q8TBZ5 544 aa17.2■□□□□ 0.34
VSX1-205ENST00000429762 SONP18583 2426 aaKnown RBP17.2■□□□□ 0.34
VSX1-205ENST00000429762 TOMM40O96008 361 aa17.2■□□□□ 0.34
VSX1-205ENST00000429762 KLK9Q2XQG4 91 aa17.2■□□□□ 0.34
VSX1-205ENST00000429762 NECAP1Q8NC96 275 aa17.2■□□□□ 0.34
VSX1-205ENST00000429762 VN1R17PQ8TDU5 208 aa17.2■□□□□ 0.34
VSX1-205ENST00000429762 SMR3AQ99954 134 aa17.2■□□□□ 0.34
VSX1-205ENST00000429762 KLK9Q9UKQ9 250 aa17.2■□□□□ 0.34
VSX1-205ENST00000429762 C11orf94C9JXX5 98 aa17.19■□□□□ 0.34
VSX1-205ENST00000429762 TRGV3P03979 118 aa17.19■□□□□ 0.34
VSX1-205ENST00000429762 TAS2R45P59539 299 aa17.19■□□□□ 0.34
VSX1-205ENST00000429762 CCDC140Q96MF4 163 aa17.19■□□□□ 0.34
VSX1-205ENST00000429762 RNF2Q99496 336 aa17.19■□□□□ 0.34
VSX1-205ENST00000429762 AP4M1O00189 453 aa17.19■□□□□ 0.34
VSX1-205ENST00000429762 IL4P05112 153 aa17.19■□□□□ 0.34
VSX1-205ENST00000429762 PPIFP30405 207 aaKnown RBP17.19■□□□□ 0.34
VSX1-205ENST00000429762 CLEC19AQ6UXS0 136 aa17.19■□□□□ 0.34
VSX1-205ENST00000429762 SVBPQ8N300 66 aa17.19■□□□□ 0.34
VSX1-205ENST00000429762 C20orf24Q9BUV8 137 aa17.19■□□□□ 0.34
VSX1-205ENST00000429762 HIGD1AQ9Y241 93 aa17.19■□□□□ 0.34
VSX1-205ENST00000429762 MYO9AB2RTY4 2548 aa17.18■□□□□ 0.34
VSX1-205ENST00000429762 TRAV30A0A087WSZ9 112 aa17.18■□□□□ 0.34
VSX1-205ENST00000429762 ELOA3CA0A087WX78 387 aaPredicted RBP17.18■□□□□ 0.34
VSX1-205ENST00000429762 CTSGP08311 255 aa17.18■□□□□ 0.34
VSX1-205ENST00000429762 ADMP35318 185 aa17.18■□□□□ 0.34
VSX1-205ENST00000429762 TPPP2P59282 170 aa17.18■□□□□ 0.34
VSX1-205ENST00000429762 PLP1P60201 277 aa17.18■□□□□ 0.34
VSX1-205ENST00000429762 FAM90A2PQ658T7 463 aa17.18■□□□□ 0.34
VSX1-205ENST00000429762 PRDM13Q9H4Q3 707 aa17.18■□□□□ 0.34
VSX1-205ENST00000429762 PUS1Q9Y606 427 aaKnown RBP eCLIP17.18■□□□□ 0.34
VSX1-205ENST00000429762 IGHV3OR16-8A0A075B7F1 116 aa17.17■□□□□ 0.34
VSX1-205ENST00000429762 ZNF491Q8N8L2 437 aa17.17■□□□□ 0.34
VSX1-205ENST00000429762 KLK15Q9H2R5 256 aa17.17■□□□□ 0.34
VSX1-205ENST00000429762 CLEC3BP05452 202 aa17.17■□□□□ 0.34
VSX1-205ENST00000429762 FABP1P07148 127 aa17.17■□□□□ 0.34
VSX1-205ENST00000429762 YPEL3P61236 119 aaPredicted RBP17.17■□□□□ 0.34
VSX1-205ENST00000429762 UBE2L3P68036 154 aaKnown RBP17.17■□□□□ 0.34
VSX1-205ENST00000429762 ATP5G2Q06055 141 aa17.17■□□□□ 0.34
VSX1-205ENST00000429762 PQLC2Q6ZP29 291 aa17.17■□□□□ 0.34
VSX1-205ENST00000429762 ZNF329Q86UD4 541 aa17.17■□□□□ 0.34
VSX1-205ENST00000429762 NKX6-2Q9C056 277 aaPredicted RBP17.17■□□□□ 0.34
VSX1-205ENST00000429762 GNB4Q9HAV0 340 aa17.17■□□□□ 0.34
VSX1-205ENST00000429762 FAM74A7A6NL05 159 aa17.16■□□□□ 0.34
VSX1-205ENST00000429762 PF4V1P10720 104 aa17.16■□□□□ 0.34
VSX1-205ENST00000429762 USF2Q15853 346 aaPredicted RBP17.16■□□□□ 0.34
VSX1-205ENST00000429762 ZNF674Q2M3X9 581 aa17.16■□□□□ 0.34
VSX1-205ENST00000429762 C10orf99Q6UWK7 81 aa17.16■□□□□ 0.34
VSX1-205ENST00000429762 EEF1AKMT3Q96AZ1 226 aa17.16■□□□□ 0.34
VSX1-205ENST00000429762 RNF125Q96EQ8 232 aa17.16■□□□□ 0.34
VSX1-205ENST00000429762 PAXXQ9BUH6 204 aa17.16■□□□□ 0.34
VSX1-205ENST00000429762 ANK3Q12955 4377 aaKnown RBP17.15■□□□□ 0.34
VSX1-205ENST00000429762 RPUSD4Q96CM3 377 aaKnown RBP17.15■□□□□ 0.34
VSX1-205ENST00000429762 ZNF414Q96IQ9 312 aa17.15■□□□□ 0.34
VSX1-205ENST00000429762 SLC25A39Q9BZJ4 359 aaPredicted RBP17.15■□□□□ 0.34
VSX1-205ENST00000429762 WI2-2373I1.2A0A1W2PRP0 233 aa17.15■□□□□ 0.34
VSX1-205ENST00000429762 NPPCP23582 126 aa17.15■□□□□ 0.34
VSX1-205ENST00000429762 AKR1C3P42330 323 aa17.15■□□□□ 0.34
VSX1-205ENST00000429762 CLRN3Q8NCR9 226 aa17.15■□□□□ 0.34
VSX1-205ENST00000429762 TXN2Q99757 166 aa17.15■□□□□ 0.34
VSX1-205ENST00000429762 OR51M1Q9H341 326 aa17.15■□□□□ 0.34
VSX1-205ENST00000429762 MRPL27Q9P0M9 148 aaKnown RBP17.15■□□□□ 0.34
VSX1-205ENST00000429762 PPP5D1E7EU14 171 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms