RNA–Protein interactions for RNA: ENST00000427660.6

NUDCD1-202, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene NUDCD1, Length 2,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-202ENST00000427660 ALG5Q9Y673 324 aa2.8□□□□□ -1.96
NUDCD1-202ENST00000427660 IGHV3-21A0A0B4J1V1 117 aa2.79□□□□□ -1.96
NUDCD1-202ENST00000427660 KANTRA0A1W2PQU2 76 aa2.79□□□□□ -1.96
NUDCD1-202ENST00000427660 LINC00862A6NCI5 91 aa2.79□□□□□ -1.96
NUDCD1-202ENST00000427660 IGLL5B9A064 214 aa2.79□□□□□ -1.96
NUDCD1-202ENST00000427660 RPL36A-HNRNPH2H7BZ11 118 aa2.79□□□□□ -1.96
NUDCD1-202ENST00000427660 K7ERS5 55 aa2.79□□□□□ -1.96
NUDCD1-202ENST00000427660 MFNGO00587 321 aa2.79□□□□□ -1.96
NUDCD1-202ENST00000427660 EEF1E1O43324 174 aaKnown RBP2.79□□□□□ -1.96
NUDCD1-202ENST00000427660 NRASP01111 189 aa2.79□□□□□ -1.96
NUDCD1-202ENST00000427660 HRASP01112 189 aa2.79□□□□□ -1.96
NUDCD1-202ENST00000427660 KRASP01116 189 aa2.79□□□□□ -1.96
NUDCD1-202ENST00000427660 LTAP01374 205 aa2.79□□□□□ -1.96
NUDCD1-202ENST00000427660 ATP5G1P05496 136 aa2.79□□□□□ -1.96
NUDCD1-202ENST00000427660 HIST1H1EP10412 219 aaKnown RBP2.79□□□□□ -1.96
NUDCD1-202ENST00000427660 SLC25A4P12235 298 aa2.79□□□□□ -1.96
NUDCD1-202ENST00000427660 SULT1A2P50226 295 aa2.79□□□□□ -1.96
NUDCD1-202ENST00000427660 RAB5CP51148 216 aa2.79□□□□□ -1.96
NUDCD1-202ENST00000427660 RPS11P62280 158 aaKnown RBP eCLIP2.79□□□□□ -1.96
NUDCD1-202ENST00000427660 HIST1H3AP68431 136 aa2.79□□□□□ -1.96
NUDCD1-202ENST00000427660 ENDOGQ14249 297 aaKnown RBP2.79□□□□□ -1.96
NUDCD1-202ENST00000427660 HIST3H3Q16695 136 aa2.79□□□□□ -1.96
NUDCD1-202ENST00000427660 MPV17LQ2QL34 196 aa2.79□□□□□ -1.96
NUDCD1-202ENST00000427660 DEFB133Q30KQ1 61 aa2.79□□□□□ -1.96
NUDCD1-202ENST00000427660 HIST2H3PS2Q5TEC6 136 aa2.79□□□□□ -1.96
NUDCD1-202ENST00000427660 FAM27BQ5VT28 67 aa2.79□□□□□ -1.96
NUDCD1-202ENST00000427660 HIST2H3AQ71DI3 136 aa2.79□□□□□ -1.96
NUDCD1-202ENST00000427660 AMN1Q8IY45 258 aa2.79□□□□□ -1.96
NUDCD1-202ENST00000427660 ZFP62Q8NB50 900 aaPredicted RBP2.79□□□□□ -1.96
NUDCD1-202ENST00000427660 ZNRF2Q8NHG8 242 aa2.79□□□□□ -1.96
NUDCD1-202ENST00000427660 THEM6Q8WUY1 208 aa2.79□□□□□ -1.96
NUDCD1-202ENST00000427660 TMEM203Q969S6 136 aa2.79□□□□□ -1.96
NUDCD1-202ENST00000427660 NMES1Q9C002 83 aa2.79□□□□□ -1.96
NUDCD1-202ENST00000427660 RERGLQ9H628 205 aa2.79□□□□□ -1.96
NUDCD1-202ENST00000427660 LOC107986453A0A1B0GWG9 222 aa2.78□□□□□ -1.96
NUDCD1-202ENST00000427660 LEUTXA8MZ59 168 aa2.78□□□□□ -1.96
NUDCD1-202ENST00000427660 PLA2G10O15496 165 aa2.78□□□□□ -1.96
NUDCD1-202ENST00000427660 IFNA21P01568 189 aa2.78□□□□□ -1.96
NUDCD1-202ENST00000427660 IGLV3-1P01715 115 aa2.78□□□□□ -1.96
NUDCD1-202ENST00000427660 CRHP06850 196 aa2.78□□□□□ -1.96
NUDCD1-202ENST00000427660 DDTP30046 118 aa2.78□□□□□ -1.96
NUDCD1-202ENST00000427660 S100A11P31949 105 aa2.78□□□□□ -1.96
NUDCD1-202ENST00000427660 ZNF93P35789 620 aaPredicted RBP2.78□□□□□ -1.96
NUDCD1-202ENST00000427660 PSMB3P49720 205 aa2.78□□□□□ -1.96
NUDCD1-202ENST00000427660 OR8G1Q15617 311 aa2.78□□□□□ -1.96
NUDCD1-202ENST00000427660 DEFB110Q30KQ9 67 aa2.78□□□□□ -1.96
NUDCD1-202ENST00000427660 AKIRIN2Q53H80 203 aa2.78□□□□□ -1.96
NUDCD1-202ENST00000427660 TMEM128Q5BJH2 165 aa2.78□□□□□ -1.96
NUDCD1-202ENST00000427660 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.78□□□□□ -1.96
NUDCD1-202ENST00000427660 ZNF880Q6PDB4 577 aa2.78□□□□□ -1.96
NUDCD1-202ENST00000427660 TMEM144Q7Z5S9 345 aa2.78□□□□□ -1.96
NUDCD1-202ENST00000427660 COMMD7Q86VX2 200 aa2.78□□□□□ -1.96
NUDCD1-202ENST00000427660 CMBLQ96DG6 245 aa2.78□□□□□ -1.96
NUDCD1-202ENST00000427660 SLAMF6Q96DU3 332 aa2.78□□□□□ -1.96
NUDCD1-202ENST00000427660 SHANK2-AS3Q9BTD1 123 aa2.78□□□□□ -1.96
NUDCD1-202ENST00000427660 GTSF1LQ9H1H1 148 aa2.78□□□□□ -1.96
NUDCD1-202ENST00000427660 V9GYS6 101 aa2.78□□□□□ -1.96
NUDCD1-202ENST00000427660 A0A1B0GVG6 124 aa2.78□□□□□ -1.96
NUDCD1-202ENST00000427660 RFPL4AA6NLU0 287 aa2.78□□□□□ -1.96
NUDCD1-202ENST00000427660 TMEM14DPA8MWL7 114 aa2.78□□□□□ -1.96
NUDCD1-202ENST00000427660 RFPL4AL1F8VTS6 287 aa2.78□□□□□ -1.96
NUDCD1-202ENST00000427660 FBP1P09467 338 aa2.78□□□□□ -1.96
NUDCD1-202ENST00000427660 TPT1P13693 172 aaKnown RBP2.78□□□□□ -1.96
NUDCD1-202ENST00000427660 CXCL3P19876 107 aa2.78□□□□□ -1.96
NUDCD1-202ENST00000427660 NFYAP23511 347 aaPredicted RBP2.78□□□□□ -1.96
NUDCD1-202ENST00000427660 CD200P41217 278 aa2.78□□□□□ -1.96
NUDCD1-202ENST00000427660 CCL7P80098 99 aa2.78□□□□□ -1.96
NUDCD1-202ENST00000427660 H3F3AP84243 136 aa2.78□□□□□ -1.96
NUDCD1-202ENST00000427660 FOXF1Q12946 379 aa2.78□□□□□ -1.96
NUDCD1-202ENST00000427660 Q6ZS52 159 aa2.78□□□□□ -1.96
NUDCD1-202ENST00000427660 C12orf45Q8N5I9 185 aaPredicted RBP2.78□□□□□ -1.96
NUDCD1-202ENST00000427660 KLF14Q8TD94 323 aaPredicted RBP2.78□□□□□ -1.96
NUDCD1-202ENST00000427660 AQP3Q92482 292 aa2.78□□□□□ -1.96
NUDCD1-202ENST00000427660 APOBEC3DQ96AK3 386 aaPredicted RBP2.78□□□□□ -1.96
NUDCD1-202ENST00000427660 BTF3L4Q96K17 158 aa2.78□□□□□ -1.96
NUDCD1-202ENST00000427660 GINS4Q9BRT9 223 aa2.78□□□□□ -1.96
NUDCD1-202ENST00000427660 GNB1LQ9BYB4 327 aa2.78□□□□□ -1.96
NUDCD1-202ENST00000427660 BCL2L14Q9BZR8 327 aa2.78□□□□□ -1.96
NUDCD1-202ENST00000427660 PBOV1Q9GZY1 135 aa2.78□□□□□ -1.96
NUDCD1-202ENST00000427660 OR5V1Q9UGF6 321 aa2.78□□□□□ -1.96
NUDCD1-202ENST00000427660 PRELID1Q9Y255 219 aa2.78□□□□□ -1.96
NUDCD1-202ENST00000427660 MPC1Q9Y5U8 109 aa2.78□□□□□ -1.96
NUDCD1-202ENST00000427660 THADAQ6YHU6 1953 aa2.78□□□□□ -1.96
NUDCD1-202ENST00000427660 PCDH15Q96QU1 1955 aa2.78□□□□□ -1.96
NUDCD1-202ENST00000427660 BPTFQ12830 3046 aa2.78□□□□□ -1.96
NUDCD1-202ENST00000427660 YLPM1P49750 1951 aaKnown RBP2.77□□□□□ -1.97
NUDCD1-202ENST00000427660 A0A1B0GVY2 172 aa2.77□□□□□ -1.97
NUDCD1-202ENST00000427660 B4DEV8 164 aa2.77□□□□□ -1.97
NUDCD1-202ENST00000427660 M0R129 80 aa2.77□□□□□ -1.97
NUDCD1-202ENST00000427660 ZNF324O75467 553 aaPredicted RBP2.77□□□□□ -1.97
NUDCD1-202ENST00000427660 COX6A1P12074 109 aa2.77□□□□□ -1.97
NUDCD1-202ENST00000427660 SLC25A6P12236 298 aa2.77□□□□□ -1.97
NUDCD1-202ENST00000427660 HIST1H1DP16402 221 aaKnown RBP2.77□□□□□ -1.97
NUDCD1-202ENST00000427660 CXCL2P19875 107 aa2.77□□□□□ -1.97
NUDCD1-202ENST00000427660 RBP2P50120 134 aa2.77□□□□□ -1.97
NUDCD1-202ENST00000427660 PLGLB1Q02325 96 aa2.77□□□□□ -1.97
NUDCD1-202ENST00000427660 HES3Q5TGS1 186 aa2.77□□□□□ -1.97
NUDCD1-202ENST00000427660 TEX261Q6UWH6 196 aa2.77□□□□□ -1.97
NUDCD1-202ENST00000427660 DPPA3Q6W0C5 159 aa2.77□□□□□ -1.97
NUDCD1-202ENST00000427660 TCF23Q7RTU1 214 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms