RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 OR11H6Q8NGC7 330 aa4.57□□□□□ -1.68
VTI1BP4-201ENST00000427516 PHLDA1Q8WV24 401 aaPredicted RBP4.57□□□□□ -1.68
VTI1BP4-201ENST00000427516 RNF138Q8WVD3 245 aa4.57□□□□□ -1.68
VTI1BP4-201ENST00000427516 GLMPQ8WWB7 406 aa4.57□□□□□ -1.68
VTI1BP4-201ENST00000427516 SSMEM1Q8WWF3 244 aa4.57□□□□□ -1.68
VTI1BP4-201ENST00000427516 TSACCQ96A04 125 aaPredicted RBP4.57□□□□□ -1.68
VTI1BP4-201ENST00000427516 PAXXQ9BUH6 204 aa4.57□□□□□ -1.68
VTI1BP4-201ENST00000427516 OR2H1Q9GZK4 316 aa4.57□□□□□ -1.68
VTI1BP4-201ENST00000427516 PRSS22Q9GZN4 317 aa4.57□□□□□ -1.68
VTI1BP4-201ENST00000427516 DLL3Q9NYJ7 618 aa4.57□□□□□ -1.68
VTI1BP4-201ENST00000427516 ONECUT1Q9UBC0 465 aa4.57□□□□□ -1.68
VTI1BP4-201ENST00000427516 PRO0461Q9UI25 63 aa4.57□□□□□ -1.68
VTI1BP4-201ENST00000427516 TCF19Q9Y242 345 aa4.57□□□□□ -1.68
VTI1BP4-201ENST00000427516 FOXA2Q9Y261 457 aaPredicted RBP4.57□□□□□ -1.68
VTI1BP4-201ENST00000427516 SIGLEC9Q9Y336 463 aa4.57□□□□□ -1.68
VTI1BP4-201ENST00000427516 INSIG2Q9Y5U4 225 aa4.57□□□□□ -1.68
VTI1BP4-201ENST00000427516 TRBV25-1A0A075B6N4 114 aa4.56□□□□□ -1.68
VTI1BP4-201ENST00000427516 A0A087WX48 190 aa4.56□□□□□ -1.68
VTI1BP4-201ENST00000427516 FAM240AA0A1B0GVK7 77 aa4.56□□□□□ -1.68
VTI1BP4-201ENST00000427516 PRSS29PA6NIE9 313 aa4.56□□□□□ -1.68
VTI1BP4-201ENST00000427516 C15orf61A6NNL5 157 aa4.56□□□□□ -1.68
VTI1BP4-201ENST00000427516 PRSS46E5RG02 174 aa4.56□□□□□ -1.68
VTI1BP4-201ENST00000427516 CCL16O15467 120 aa4.56□□□□□ -1.68
VTI1BP4-201ENST00000427516 PRKNO60260 465 aaPredicted RBP4.56□□□□□ -1.68
VTI1BP4-201ENST00000427516 LTAP01374 205 aa4.56□□□□□ -1.68
VTI1BP4-201ENST00000427516 IGLV2-14P01704 120 aa4.56□□□□□ -1.68
VTI1BP4-201ENST00000427516 ACYP1P07311 99 aa4.56□□□□□ -1.68
VTI1BP4-201ENST00000427516 RPL13AP40429 203 aaKnown RBP4.56□□□□□ -1.68
VTI1BP4-201ENST00000427516 HSPE1P61604 102 aaKnown RBP4.56□□□□□ -1.68
VTI1BP4-201ENST00000427516 MZT1Q08AG7 82 aa4.56□□□□□ -1.68
VTI1BP4-201ENST00000427516 IZUMO4Q1ZYL8 232 aa4.56□□□□□ -1.68
VTI1BP4-201ENST00000427516 MEIG1Q5JSS6 88 aa4.56□□□□□ -1.68
VTI1BP4-201ENST00000427516 LCE3BQ5TA77 95 aa4.56□□□□□ -1.68
VTI1BP4-201ENST00000427516 C10orf113Q5VZT2 155 aa4.56□□□□□ -1.68
VTI1BP4-201ENST00000427516 LILRA6Q6PI73 481 aa4.56□□□□□ -1.68
VTI1BP4-201ENST00000427516 ZNF493Q6ZR52 646 aa4.56□□□□□ -1.68
VTI1BP4-201ENST00000427516 MIR17HGQ75NE6 70 aa4.56□□□□□ -1.68
VTI1BP4-201ENST00000427516 SH2D6Q7Z4S9 175 aa4.56□□□□□ -1.68
VTI1BP4-201ENST00000427516 ZNF329Q86UD4 541 aa4.56□□□□□ -1.68
VTI1BP4-201ENST00000427516 TMEM219Q86XT9 240 aa4.56□□□□□ -1.68
VTI1BP4-201ENST00000427516 CIARTQ8N365 385 aaPredicted RBP4.56□□□□□ -1.68
VTI1BP4-201ENST00000427516 OSR1Q8TAX0 266 aaPredicted RBP4.56□□□□□ -1.68
VTI1BP4-201ENST00000427516 TMEM158Q8WZ71 300 aa4.56□□□□□ -1.68
VTI1BP4-201ENST00000427516 URB1-AS1Q96HZ7 61 aa4.56□□□□□ -1.68
VTI1BP4-201ENST00000427516 TMEM101Q96IK0 257 aa4.56□□□□□ -1.68
VTI1BP4-201ENST00000427516 ZNF488Q96MN9 340 aa4.56□□□□□ -1.68
VTI1BP4-201ENST00000427516 S1PR3Q99500 378 aa4.56□□□□□ -1.68
VTI1BP4-201ENST00000427516 C20orf78Q9BR46 151 aa4.56□□□□□ -1.68
VTI1BP4-201ENST00000427516 NGBQ9NPG2 151 aa4.56□□□□□ -1.68
VTI1BP4-201ENST00000427516 MDFICQ9P1T7 246 aa4.56□□□□□ -1.68
VTI1BP4-201ENST00000427516 EPDR1Q9UM22 224 aa4.56□□□□□ -1.68
VTI1BP4-201ENST00000427516 MPDZO75970 2070 aa4.56□□□□□ -1.68
VTI1BP4-201ENST00000427516 TRAV24A0A0B4J272 114 aa4.55□□□□□ -1.68
VTI1BP4-201ENST00000427516 MYMXA0A1B0GTQ4 84 aa4.55□□□□□ -1.68
VTI1BP4-201ENST00000427516 HSPB6O14558 160 aa4.55□□□□□ -1.68
VTI1BP4-201ENST00000427516 ZFAND5O76080 213 aa4.55□□□□□ -1.68
VTI1BP4-201ENST00000427516 NGFP01138 241 aa4.55□□□□□ -1.68
VTI1BP4-201ENST00000427516 NPYP01303 97 aa4.55□□□□□ -1.68
VTI1BP4-201ENST00000427516 CXCL10P02778 98 aa4.55□□□□□ -1.68
VTI1BP4-201ENST00000427516 LGALS1P09382 135 aaKnown RBP4.55□□□□□ -1.68
VTI1BP4-201ENST00000427516 FRMD6-AS1P0C7T7 363 aa4.55□□□□□ -1.68
VTI1BP4-201ENST00000427516 TNFRSF4P43489 277 aa4.55□□□□□ -1.68
VTI1BP4-201ENST00000427516 FXYD2P54710 66 aa4.55□□□□□ -1.68
VTI1BP4-201ENST00000427516 EIF4EBP1Q13541 118 aaPredicted RBP4.55□□□□□ -1.68
VTI1BP4-201ENST00000427516 C2orf83Q53S99 150 aa4.55□□□□□ -1.68
VTI1BP4-201ENST00000427516 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.55□□□□□ -1.68
VTI1BP4-201ENST00000427516 Q6ZPA2 131 aa4.55□□□□□ -1.68
VTI1BP4-201ENST00000427516 OR4C13Q8NGP0 309 aa4.55□□□□□ -1.68
VTI1BP4-201ENST00000427516 OR1L8Q8NGR8 309 aa4.55□□□□□ -1.68
VTI1BP4-201ENST00000427516 PGLYRP4Q96LB8 373 aa4.55□□□□□ -1.68
VTI1BP4-201ENST00000427516 SGK494Q96LW2 274 aa4.55□□□□□ -1.68
VTI1BP4-201ENST00000427516 FOXB1Q99853 325 aa4.55□□□□□ -1.68
VTI1BP4-201ENST00000427516 NAA38Q9BRA0 125 aaKnown RBP4.55□□□□□ -1.68
VTI1BP4-201ENST00000427516 SLC25A39Q9BZJ4 359 aaPredicted RBP4.55□□□□□ -1.68
VTI1BP4-201ENST00000427516 DEPPQ9NTK1 212 aa4.55□□□□□ -1.68
VTI1BP4-201ENST00000427516 CSDC2Q9Y534 153 aaKnown RBP4.55□□□□□ -1.68
VTI1BP4-201ENST00000427516 F11RQ9Y624 299 aaKnown RBP4.55□□□□□ -1.68
VTI1BP4-201ENST00000427516 TNRC6BQ9UPQ9 1833 aaKnown RBP4.54□□□□□ -1.68
VTI1BP4-201ENST00000427516 TDRD6O60522 2096 aaKnown RBP4.54□□□□□ -1.68
VTI1BP4-201ENST00000427516 TRAV8-2A0A0B4J237 113 aa4.54□□□□□ -1.68
VTI1BP4-201ENST00000427516 TRAV8-4A0A0B4J246 113 aa4.54□□□□□ -1.68
VTI1BP4-201ENST00000427516 C19orf71A6NCJ1 209 aa4.54□□□□□ -1.68
VTI1BP4-201ENST00000427516 SMIM9A6NGZ8 99 aa4.54□□□□□ -1.68
VTI1BP4-201ENST00000427516 SRRM4A7MD48 611 aaKnown RBP4.54□□□□□ -1.68
VTI1BP4-201ENST00000427516 K7EMI3 77 aa4.54□□□□□ -1.68
VTI1BP4-201ENST00000427516 SNAI2O43623 268 aa4.54□□□□□ -1.68
VTI1BP4-201ENST00000427516 EIF4EBP3O60516 100 aaPredicted RBP4.54□□□□□ -1.68
VTI1BP4-201ENST00000427516 PRSS1P07477 247 aa4.54□□□□□ -1.68
VTI1BP4-201ENST00000427516 CSN3P07498 182 aa4.54□□□□□ -1.68
VTI1BP4-201ENST00000427516 ZNF32P17041 273 aa4.54□□□□□ -1.68
VTI1BP4-201ENST00000427516 CA6P23280 308 aa4.54□□□□□ -1.68
VTI1BP4-201ENST00000427516 FOXG1P55316 489 aaPredicted RBP4.54□□□□□ -1.68
VTI1BP4-201ENST00000427516 DSCR4P56555 118 aaPredicted RBP4.54□□□□□ -1.68
VTI1BP4-201ENST00000427516 HERVK_113P61574 105 aa4.54□□□□□ -1.68
VTI1BP4-201ENST00000427516 ERHP84090 104 aaKnown RBP4.54□□□□□ -1.68
VTI1BP4-201ENST00000427516 COL9A2Q14055 689 aaPredicted RBP4.54□□□□□ -1.68
VTI1BP4-201ENST00000427516 MSMPQ1L6U9 139 aa4.54□□□□□ -1.68
VTI1BP4-201ENST00000427516 RSPO1Q2MKA7 263 aaPredicted RBP4.54□□□□□ -1.68
VTI1BP4-201ENST00000427516 DEFB110Q30KQ9 67 aa4.54□□□□□ -1.68
VTI1BP4-201ENST00000427516 PAPPA-AS1Q5QFB9 102 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms