RNA–Protein interactions for RNA: ENST00000427478.6

CNEP1R1-202, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,117 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-202ENST00000427478 C1QL4Q86Z23 238 aa17.12■□□□□ 0.33
CNEP1R1-202ENST00000427478 ABCA1O95477 2261 aa17.12■□□□□ 0.33
CNEP1R1-202ENST00000427478 SH2D7A6NKC9 451 aaPredicted RBP17.11■□□□□ 0.33
CNEP1R1-202ENST00000427478 C9JCJ5 164 aa17.11■□□□□ 0.33
CNEP1R1-202ENST00000427478 DSCR9P59020 149 aa17.11■□□□□ 0.33
CNEP1R1-202ENST00000427478 CLEC12BQ2HXU8 276 aa17.11■□□□□ 0.33
CNEP1R1-202ENST00000427478 STXBP6Q8NFX7 210 aa17.11■□□□□ 0.33
CNEP1R1-202ENST00000427478 MDFIC2A0A1B0GVS7 189 aa17.11■□□□□ 0.33
CNEP1R1-202ENST00000427478 PFN1P07737 140 aaKnown RBP17.11■□□□□ 0.33
CNEP1R1-202ENST00000427478 PAX1P15863 534 aa17.11■□□□□ 0.33
CNEP1R1-202ENST00000427478 SMUG1Q53HV7 270 aa17.11■□□□□ 0.33
CNEP1R1-202ENST00000427478 TMEM219Q86XT9 240 aa17.11■□□□□ 0.33
CNEP1R1-202ENST00000427478 C7orf69Q9H7B7 122 aa17.11■□□□□ 0.33
CNEP1R1-202ENST00000427478 A0A0U1RQK1 487 aa17.1■□□□□ 0.33
CNEP1R1-202ENST00000427478 HELTA6NFD8 242 aa17.1■□□□□ 0.33
CNEP1R1-202ENST00000427478 ATP6V0E1O15342 81 aa17.1■□□□□ 0.33
CNEP1R1-202ENST00000427478 GNG7O60262 68 aa17.1■□□□□ 0.33
CNEP1R1-202ENST00000427478 OR2J3O76001 311 aa17.1■□□□□ 0.33
CNEP1R1-202ENST00000427478 FABP1P07148 127 aa17.1■□□□□ 0.33
CNEP1R1-202ENST00000427478 S100PP25815 95 aa17.1■□□□□ 0.33
CNEP1R1-202ENST00000427478 ECSCRQ19T08 205 aa17.1■□□□□ 0.33
CNEP1R1-202ENST00000427478 CENPWQ5EE01 88 aa17.1■□□□□ 0.33
CNEP1R1-202ENST00000427478 BLNKQ8WV28 456 aa17.1■□□□□ 0.33
CNEP1R1-202ENST00000427478 SFRP2Q96HF1 295 aa17.1■□□□□ 0.33
CNEP1R1-202ENST00000427478 TRBV24-1A0A075B6N3 115 aa17.09■□□□□ 0.33
CNEP1R1-202ENST00000427478 NDUFB8O95169 186 aa17.09■□□□□ 0.33
CNEP1R1-202ENST00000427478 CD99P14209 185 aa17.09■□□□□ 0.33
CNEP1R1-202ENST00000427478 MFAP4P55083 255 aa17.09■□□□□ 0.33
CNEP1R1-202ENST00000427478 SGMS2Q8NHU3 365 aa17.09■□□□□ 0.33
CNEP1R1-202ENST00000427478 THYN1Q9P016 225 aa17.09■□□□□ 0.33
CNEP1R1-202ENST00000427478 SPG11Q96JI7 2443 aa17.09■□□□□ 0.33
CNEP1R1-202ENST00000427478 K7EN84 100 aa17.09■□□□□ 0.33
CNEP1R1-202ENST00000427478 IGHV3-23P01764 117 aa17.09■□□□□ 0.33
CNEP1R1-202ENST00000427478 ZNF329Q86UD4 541 aa17.09■□□□□ 0.33
CNEP1R1-202ENST00000427478 TMUB1Q9BVT8 246 aa17.09■□□□□ 0.33
CNEP1R1-202ENST00000427478 SLC25A39Q9BZJ4 359 aaPredicted RBP17.09■□□□□ 0.33
CNEP1R1-202ENST00000427478 TOMM40O96008 361 aa17.08■□□□□ 0.33
CNEP1R1-202ENST00000427478 GP9P14770 177 aa17.08■□□□□ 0.33
CNEP1R1-202ENST00000427478 GNG4P50150 75 aa17.08■□□□□ 0.33
CNEP1R1-202ENST00000427478 Q56UQ5 140 aa17.08■□□□□ 0.33
CNEP1R1-202ENST00000427478 UNQ5815/PRO19632Q6UWF5 114 aa17.08■□□□□ 0.33
CNEP1R1-202ENST00000427478 C5orf56Q8N8D9 126 aa17.08■□□□□ 0.33
CNEP1R1-202ENST00000427478 F8W735 103 aaPredicted RBP17.08■□□□□ 0.32
CNEP1R1-202ENST00000427478 S100A6P06703 90 aa17.08■□□□□ 0.32
CNEP1R1-202ENST00000427478 COL8A1P27658 744 aa17.08■□□□□ 0.32
CNEP1R1-202ENST00000427478 RANP62826 216 aaKnown RBP17.08■□□□□ 0.32
CNEP1R1-202ENST00000427478 HIF1ANQ9NWT6 349 aa17.08■□□□□ 0.32
CNEP1R1-202ENST00000427478 C21orf62Q9NYP8 219 aa17.08■□□□□ 0.32
CNEP1R1-202ENST00000427478 SOX21Q9Y651 276 aaPredicted RBP17.08■□□□□ 0.32
CNEP1R1-202ENST00000427478 B4DSR2 109 aa17.07■□□□□ 0.32
CNEP1R1-202ENST00000427478 SLC25A16P16260 332 aa17.07■□□□□ 0.32
CNEP1R1-202ENST00000427478 SNRPEP62304 92 aaKnown RBP17.07■□□□□ 0.32
CNEP1R1-202ENST00000427478 TEX38Q6PEX7 206 aa17.07■□□□□ 0.32
CNEP1R1-202ENST00000427478 MRPL27Q9P0M9 148 aaKnown RBP17.07■□□□□ 0.32
CNEP1R1-202ENST00000427478 ZFHX3Q15911 3703 aa17.07■□□□□ 0.32
CNEP1R1-202ENST00000427478 TRAV30A0A087WSZ9 112 aa17.06■□□□□ 0.32
CNEP1R1-202ENST00000427478 A0A1W2PPQ1 181 aa17.06■□□□□ 0.32
CNEP1R1-202ENST00000427478 PPP1R2P9O14990 202 aa17.06■□□□□ 0.32
CNEP1R1-202ENST00000427478 IL4P05112 153 aa17.06■□□□□ 0.32
CNEP1R1-202ENST00000427478 FAM110DQ8TAY7 271 aaPredicted RBP17.06■□□□□ 0.32
CNEP1R1-202ENST00000427478 PIFOQ8TCI5 191 aa17.06■□□□□ 0.32
CNEP1R1-202ENST00000427478 ZNF48Q96MX3 618 aaPredicted RBP17.06■□□□□ 0.32
CNEP1R1-202ENST00000427478 FBXL7Q9UJT9 491 aa17.06■□□□□ 0.32
CNEP1R1-202ENST00000427478 LY96Q9Y6Y9 160 aa17.06■□□□□ 0.32
CNEP1R1-202ENST00000427478 CSMD2Q7Z408 3487 aa17.06■□□□□ 0.32
CNEP1R1-202ENST00000427478 EPG5Q9HCE0 2579 aa17.06■□□□□ 0.32
CNEP1R1-202ENST00000427478 LINC01548A6NM66 108 aa17.06■□□□□ 0.32
CNEP1R1-202ENST00000427478 TRGC2P03986 189 aa17.06■□□□□ 0.32
CNEP1R1-202ENST00000427478 NBEAP1P0C6P0 100 aa17.06■□□□□ 0.32
CNEP1R1-202ENST00000427478 SRP14P37108 136 aaKnown RBP17.06■□□□□ 0.32
CNEP1R1-202ENST00000427478 ZNF491Q8N8L2 437 aa17.06■□□□□ 0.32
CNEP1R1-202ENST00000427478 RNF125Q96EQ8 232 aa17.06■□□□□ 0.32
CNEP1R1-202ENST00000427478 MOB4Q9Y3A3 225 aa17.06■□□□□ 0.32
CNEP1R1-202ENST00000427478 H3BTX0 84 aa17.05■□□□□ 0.32
CNEP1R1-202ENST00000427478 PYGO2Q9BRQ0 406 aa17.05■□□□□ 0.32
CNEP1R1-202ENST00000427478 MEGF9Q9H1U4 602 aa17.05■□□□□ 0.32
CNEP1R1-202ENST00000427478 OR5I1Q13606 314 aa17.05■□□□□ 0.32
CNEP1R1-202ENST00000427478 KCNIP4Q6PIL6 250 aa17.05■□□□□ 0.32
CNEP1R1-202ENST00000427478 ZNF600Q6ZNG1 722 aa17.05■□□□□ 0.32
CNEP1R1-202ENST00000427478 OR10G8Q8NGN5 311 aa17.05■□□□□ 0.32
CNEP1R1-202ENST00000427478 LINC00479Q96M42 142 aa17.05■□□□□ 0.32
CNEP1R1-202ENST00000427478 FAM208BQ5VWN6 2430 aa17.04■□□□□ 0.32
CNEP1R1-202ENST00000427478 FBN2P35556 2912 aa17.04■□□□□ 0.32
CNEP1R1-202ENST00000427478 G3V318 75 aa17.04■□□□□ 0.32
CNEP1R1-202ENST00000427478 PEX7O00628 323 aa17.04■□□□□ 0.32
CNEP1R1-202ENST00000427478 MYCNOSP40205 109 aa17.04■□□□□ 0.32
CNEP1R1-202ENST00000427478 KRTAP10-9P60411 292 aa17.04■□□□□ 0.32
CNEP1R1-202ENST00000427478 YPEL3P61236 119 aaPredicted RBP17.04■□□□□ 0.32
CNEP1R1-202ENST00000427478 GNG5P63218 68 aa17.04■□□□□ 0.32
CNEP1R1-202ENST00000427478 IGF2BP2-AS1Q96M15 143 aa17.04■□□□□ 0.32
CNEP1R1-202ENST00000427478 CELSR1Q9NYQ6 3014 aa17.04■□□□□ 0.32
CNEP1R1-202ENST00000427478 OR2T8A6NH00 312 aa17.03■□□□□ 0.32
CNEP1R1-202ENST00000427478 FAM3BP58499 235 aaPredicted RBP17.03■□□□□ 0.32
CNEP1R1-202ENST00000427478 CELSR2Q9HCU4 2923 aa17.03■□□□□ 0.32
CNEP1R1-202ENST00000427478 WI2-2373I1.2A0A1W2PRP0 233 aa17.03■□□□□ 0.32
CNEP1R1-202ENST00000427478 C5orf52A6NGY3 159 aa17.03■□□□□ 0.32
CNEP1R1-202ENST00000427478 AVPP01185 164 aa17.03■□□□□ 0.32
CNEP1R1-202ENST00000427478 HIST1H1BP16401 226 aaKnown RBP17.03■□□□□ 0.32
CNEP1R1-202ENST00000427478 SHANK2-AS3Q9BTD1 123 aa17.03■□□□□ 0.32
CNEP1R1-202ENST00000427478 TRAV20A0A0B4J274 112 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms