RNA–Protein interactions for RNA: ENST00000426681.2

PDGFA-205, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 5

Gene PDGFA, Length 357 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-205ENST00000426681 CCNKO75909 580 aa17.57■□□□□ 0.4
PDGFA-205ENST00000426681 PVALBP20472 110 aaPredicted RBP17.57■□□□□ 0.4
PDGFA-205ENST00000426681 DLK1P80370 383 aa17.57■□□□□ 0.4
PDGFA-205ENST00000426681 RAB32Q13637 225 aa17.57■□□□□ 0.4
PDGFA-205ENST00000426681 USF2Q15853 346 aaPredicted RBP17.57■□□□□ 0.4
PDGFA-205ENST00000426681 TMEM144Q7Z5S9 345 aa17.57■□□□□ 0.4
PDGFA-205ENST00000426681 OR10P1Q8NGE3 313 aa17.57■□□□□ 0.4
PDGFA-205ENST00000426681 NARS2Q96I59 477 aaKnown RBP17.57■□□□□ 0.4
PDGFA-205ENST00000426681 NMES1Q9C002 83 aa17.57■□□□□ 0.4
PDGFA-205ENST00000426681 SSNA1O43805 119 aa17.56■□□□□ 0.4
PDGFA-205ENST00000426681 SIX6O95475 246 aa17.56■□□□□ 0.4
PDGFA-205ENST00000426681 HNRNPCP07910 306 aaKnown RBP eCLIP17.56■□□□□ 0.4
PDGFA-205ENST00000426681 S100A10P60903 97 aa17.56■□□□□ 0.4
PDGFA-205ENST00000426681 CYCSP99999 105 aaKnown RBP17.56■□□□□ 0.4
PDGFA-205ENST00000426681 TCF24Q7RTU0 167 aa17.56■□□□□ 0.4
PDGFA-205ENST00000426681 RNF125Q96EQ8 232 aa17.56■□□□□ 0.4
PDGFA-205ENST00000426681 GGACTQ9BVM4 153 aa17.56■□□□□ 0.4
PDGFA-205ENST00000426681 IGHV3-66A0A0C4DH42 116 aa17.55■□□□□ 0.4
PDGFA-205ENST00000426681 OR4C46A6NHA9 309 aa17.55■□□□□ 0.4
PDGFA-205ENST00000426681 OR11H12B2RN74 326 aa17.55■□□□□ 0.4
PDGFA-205ENST00000426681 NHLRC4P0CG21 123 aaPredicted RBP17.55■□□□□ 0.4
PDGFA-205ENST00000426681 AKR1C1Q04828 323 aa17.55■□□□□ 0.4
PDGFA-205ENST00000426681 GRAMD2BQ96HH9 432 aa17.55■□□□□ 0.4
PDGFA-205ENST00000426681 DEDDO75618 318 aa17.54■□□□□ 0.4
PDGFA-205ENST00000426681 DFFBO76075 338 aa17.54■□□□□ 0.4
PDGFA-205ENST00000426681 CFDP00746 253 aaPredicted RBP17.54■□□□□ 0.4
PDGFA-205ENST00000426681 H2BFSP57053 126 aa17.54■□□□□ 0.4
PDGFA-205ENST00000426681 ARL16Q0P5N6 197 aa17.54■□□□□ 0.4
PDGFA-205ENST00000426681 TUBA4BQ9H853 241 aa17.54■□□□□ 0.4
PDGFA-205ENST00000426681 LYRM2Q9NU23 88 aaPredicted RBP17.54■□□□□ 0.4
PDGFA-205ENST00000426681 RABAC1Q9UI14 185 aa17.54■□□□□ 0.4
PDGFA-205ENST00000426681 P2RY1P47900 373 aa17.53■□□□□ 0.4
PDGFA-205ENST00000426681 BCAP31P51572 246 aa17.53■□□□□ 0.4
PDGFA-205ENST00000426681 CAV2P51636 162 aa17.53■□□□□ 0.4
PDGFA-205ENST00000426681 DEFB125Q8N687 156 aa17.53■□□□□ 0.4
PDGFA-205ENST00000426681 FAM110AQ9BQ89 295 aa17.53■□□□□ 0.4
PDGFA-205ENST00000426681 NPVFQ9HCQ7 196 aa17.53■□□□□ 0.4
PDGFA-205ENST00000426681 EIF2B2P49770 351 aaKnown RBP17.52■□□□□ 0.4
PDGFA-205ENST00000426681 RRAS2P62070 204 aaPredicted RBP17.52■□□□□ 0.4
PDGFA-205ENST00000426681 PAFAH1B2P68402 229 aa17.52■□□□□ 0.4
PDGFA-205ENST00000426681 OR2F1Q13607 317 aa17.52■□□□□ 0.4
PDGFA-205ENST00000426681 C16orf54Q6UWD8 224 aa17.52■□□□□ 0.4
PDGFA-205ENST00000426681 SBSPONQ8IVN8 264 aa17.52■□□□□ 0.4
PDGFA-205ENST00000426681 MGAT4CQ9UBM8 478 aa17.52■□□□□ 0.4
PDGFA-205ENST00000426681 ALG5Q9Y673 324 aa17.52■□□□□ 0.4
PDGFA-205ENST00000426681 COL7A1Q02388 2944 aa17.51■□□□□ 0.39
PDGFA-205ENST00000426681 TRAV2A0A0B4J234 112 aa17.51■□□□□ 0.39
PDGFA-205ENST00000426681 SMCO3A2RU48 225 aa17.51■□□□□ 0.39
PDGFA-205ENST00000426681 FAM24AA6NFZ4 105 aa17.51■□□□□ 0.39
PDGFA-205ENST00000426681 BUB3O43684 328 aa17.51■□□□□ 0.39
PDGFA-205ENST00000426681 LINC00322Q6ZN03 302 aaPredicted RBP17.51■□□□□ 0.39
PDGFA-205ENST00000426681 ASCL2Q99929 193 aa17.51■□□□□ 0.39
PDGFA-205ENST00000426681 WFDC10AQ9H1F0 79 aa17.51■□□□□ 0.39
PDGFA-205ENST00000426681 PFDN2Q9UHV9 154 aa17.51■□□□□ 0.39
PDGFA-205ENST00000426681 NUP62P37198 522 aaPredicted RBP17.5■□□□□ 0.39
PDGFA-205ENST00000426681 CMC4P56277 68 aaPredicted RBP17.5■□□□□ 0.39
PDGFA-205ENST00000426681 RGS21Q2M5E4 152 aa17.5■□□□□ 0.39
PDGFA-205ENST00000426681 TMEM252Q8N6L7 170 aa17.5■□□□□ 0.39
PDGFA-205ENST00000426681 GLMPQ8WWB7 406 aa17.5■□□□□ 0.39
PDGFA-205ENST00000426681 PBDC1Q9BVG4 233 aa17.5■□□□□ 0.39
PDGFA-205ENST00000426681 MS4A6AQ9H2W1 248 aa17.5■□□□□ 0.39
PDGFA-205ENST00000426681 DNAH9Q9NYC9 4486 aa17.5■□□□□ 0.39
PDGFA-205ENST00000426681 IGKV3-7A0A075B6H7 116 aa17.49■□□□□ 0.39
PDGFA-205ENST00000426681 HELTA6NFD8 242 aa17.49■□□□□ 0.39
PDGFA-205ENST00000426681 CST7O76096 145 aa17.49■□□□□ 0.39
PDGFA-205ENST00000426681 RLN2P04090 185 aa17.49■□□□□ 0.39
PDGFA-205ENST00000426681 SULT1A1P50225 295 aa17.49■□□□□ 0.39
PDGFA-205ENST00000426681 LYZP61626 148 aa17.49■□□□□ 0.39
PDGFA-205ENST00000426681 RPL11P62913 178 aaKnown RBP17.49■□□□□ 0.39
PDGFA-205ENST00000426681 ODF3L2Q3SX64 289 aa17.49■□□□□ 0.39
PDGFA-205ENST00000426681 TEPPQ6URK8 271 aa17.49■□□□□ 0.39
PDGFA-205ENST00000426681 TMEM182Q6ZP80 229 aaPredicted RBP17.49■□□□□ 0.39
PDGFA-205ENST00000426681 CYP2G1PQ6ZSU1 146 aa17.49■□□□□ 0.39
PDGFA-205ENST00000426681 GBGT1Q8N5D6 347 aa17.49■□□□□ 0.39
PDGFA-205ENST00000426681 BPIFCQ8NFQ6 507 aa17.49■□□□□ 0.39
PDGFA-205ENST00000426681 SRD5A3Q9H8P0 318 aa17.49■□□□□ 0.39
PDGFA-205ENST00000426681 IGSF23A1L1A6 192 aa17.48■□□□□ 0.39
PDGFA-205ENST00000426681 TFPI2P48307 235 aa17.48■□□□□ 0.39
PDGFA-205ENST00000426681 AP2S1P53680 142 aaPredicted RBP17.48■□□□□ 0.39
PDGFA-205ENST00000426681 SELENOTP62341 195 aa17.48■□□□□ 0.39
PDGFA-205ENST00000426681 SLC38A11Q08AI6 406 aa17.48■□□□□ 0.39
PDGFA-205ENST00000426681 SLC45A2Q9UMX9 530 aa17.48■□□□□ 0.39
PDGFA-205ENST00000426681 RBMY1BA6NDE4 496 aaKnown RBP17.47■□□□□ 0.39
PDGFA-205ENST00000426681 RBMY1EA6NEQ0 496 aaKnown RBP17.47■□□□□ 0.39
PDGFA-205ENST00000426681 E5RGE8 158 aa17.47■□□□□ 0.39
PDGFA-205ENST00000426681 H0YIZ8 118 aa17.47■□□□□ 0.39
PDGFA-205ENST00000426681 DNASE2O00115 360 aaPredicted RBP17.47■□□□□ 0.39
PDGFA-205ENST00000426681 RBMY1DP0C7P1 496 aaKnown RBP17.47■□□□□ 0.39
PDGFA-205ENST00000426681 S100A11P31949 105 aa17.47■□□□□ 0.39
PDGFA-205ENST00000426681 STX12Q86Y82 276 aa17.47■□□□□ 0.39
PDGFA-205ENST00000426681 STPG3Q8N7X2 389 aa17.47■□□□□ 0.39
PDGFA-205ENST00000426681 PPP1R1CQ8WVI7 109 aa17.47■□□□□ 0.39
PDGFA-205ENST00000426681 GATA2P23769 480 aaPredicted RBP17.46■□□□□ 0.39
PDGFA-205ENST00000426681 HAGHQ16775 308 aa17.46■□□□□ 0.39
PDGFA-205ENST00000426681 VWC2Q2TAL6 325 aa17.46■□□□□ 0.39
PDGFA-205ENST00000426681 LRRC37A5PQ49AS3 106 aa17.46■□□□□ 0.39
PDGFA-205ENST00000426681 C1orf194Q5T5A4 169 aa17.46■□□□□ 0.39
PDGFA-205ENST00000426681 TMEM217Q8N7C4 229 aa17.46■□□□□ 0.39
PDGFA-205ENST00000426681 OR5AC2Q9NZP5 309 aa17.46■□□□□ 0.39
PDGFA-205ENST00000426681 UBQLN2Q9UHD9 624 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms