RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 THAP6Q8TBB0 222 aa7.03□□□□□ -1.28
PDGFC-202ENST00000422544 CHAC2Q8WUX2 184 aa7.03□□□□□ -1.28
PDGFC-202ENST00000422544 GGACTQ9BVM4 153 aa7.03□□□□□ -1.28
PDGFC-202ENST00000422544 SLC25A31Q9H0C2 315 aa7.03□□□□□ -1.28
PDGFC-202ENST00000422544 ZFAND3Q9H8U3 227 aa7.03□□□□□ -1.28
PDGFC-202ENST00000422544 DAZ1Q9NQZ3 744 aaKnown RBP7.03□□□□□ -1.28
PDGFC-202ENST00000422544 SIGLEC8Q9NYZ4 499 aa7.03□□□□□ -1.28
PDGFC-202ENST00000422544 MBD2Q9UBB5 411 aa7.03□□□□□ -1.28
PDGFC-202ENST00000422544 IGHV3OR16-13A0A075B7E8 117 aa7.02□□□□□ -1.29
PDGFC-202ENST00000422544 IGHV3-74A0A0B4J1X5 117 aa7.02□□□□□ -1.29
PDGFC-202ENST00000422544 TOMM40O96008 361 aa7.02□□□□□ -1.29
PDGFC-202ENST00000422544 IGLV1-51P01701 117 aa7.02□□□□□ -1.29
PDGFC-202ENST00000422544 PRB2P02812 416 aaPredicted RBP7.02□□□□□ -1.29
PDGFC-202ENST00000422544 PET100P0DJ07 73 aa7.02□□□□□ -1.29
PDGFC-202ENST00000422544 C8orf88P0DMB2 117 aa7.02□□□□□ -1.29
PDGFC-202ENST00000422544 PSG1P11464 419 aa7.02□□□□□ -1.29
PDGFC-202ENST00000422544 S100A11P31949 105 aa7.02□□□□□ -1.29
PDGFC-202ENST00000422544 RAP2BP61225 183 aa7.02□□□□□ -1.29
PDGFC-202ENST00000422544 EWSR1Q01844 656 aaKnown RBP eCLIP7.02□□□□□ -1.29
PDGFC-202ENST00000422544 EGFEM1PQ0D2K5 195 aa7.02□□□□□ -1.29
PDGFC-202ENST00000422544 OR2F1Q13607 317 aa7.02□□□□□ -1.29
PDGFC-202ENST00000422544 DEFB114Q30KQ6 69 aa7.02□□□□□ -1.29
PDGFC-202ENST00000422544 KPRPQ5T749 579 aaPredicted RBP7.02□□□□□ -1.29
PDGFC-202ENST00000422544 TMEM182Q6ZP80 229 aaPredicted RBP7.02□□□□□ -1.29
PDGFC-202ENST00000422544 DYNLRB2Q8TF09 96 aa7.02□□□□□ -1.29
PDGFC-202ENST00000422544 TRGV9Q99603 122 aa7.02□□□□□ -1.29
PDGFC-202ENST00000422544 NPVFQ9HCQ7 196 aa7.02□□□□□ -1.29
PDGFC-202ENST00000422544 MRPL27Q9P0M9 148 aaKnown RBP7.02□□□□□ -1.29
PDGFC-202ENST00000422544 MLXQ9UH92 298 aa7.02□□□□□ -1.29
PDGFC-202ENST00000422544 IGHV3-66A0A0C4DH42 116 aa7.01□□□□□ -1.29
PDGFC-202ENST00000422544 IGHV7-4-1A0A0J9YVY3 117 aa7.01□□□□□ -1.29
PDGFC-202ENST00000422544 IZUMO1RA6ND01 250 aa7.01□□□□□ -1.29
PDGFC-202ENST00000422544 FNDC10F2Z333 226 aa7.01□□□□□ -1.29
PDGFC-202ENST00000422544 SCAF4O95104 1147 aaKnown RBP7.01□□□□□ -1.29
PDGFC-202ENST00000422544 APOHP02749 345 aaPredicted RBP7.01□□□□□ -1.29
PDGFC-202ENST00000422544 IL4P05112 153 aa7.01□□□□□ -1.29
PDGFC-202ENST00000422544 FABP1P07148 127 aa7.01□□□□□ -1.29
PDGFC-202ENST00000422544 LYL1P12980 280 aa7.01□□□□□ -1.29
PDGFC-202ENST00000422544 NPPCP23582 126 aa7.01□□□□□ -1.29
PDGFC-202ENST00000422544 GATA2P23769 480 aaPredicted RBP7.01□□□□□ -1.29
PDGFC-202ENST00000422544 RPL12P30050 165 aaKnown RBP7.01□□□□□ -1.29
PDGFC-202ENST00000422544 HBG1P69891 147 aa7.01□□□□□ -1.29
PDGFC-202ENST00000422544 HBG2P69892 147 aa7.01□□□□□ -1.29
PDGFC-202ENST00000422544 CD300EQ496F6 205 aaPredicted RBP7.01□□□□□ -1.29
PDGFC-202ENST00000422544 BTNL8Q6UX41 500 aa7.01□□□□□ -1.29
PDGFC-202ENST00000422544 LILRB2Q8N423 598 aa7.01□□□□□ -1.29
PDGFC-202ENST00000422544 OR51G1Q8NGK1 321 aa7.01□□□□□ -1.29
PDGFC-202ENST00000422544 OR5C1Q8NGR4 320 aa7.01□□□□□ -1.29
PDGFC-202ENST00000422544 OR2T35Q8NGX2 323 aa7.01□□□□□ -1.29
PDGFC-202ENST00000422544 ASB13Q8WXK3 278 aa7.01□□□□□ -1.29
PDGFC-202ENST00000422544 MARC2Q969Z3 335 aa7.01□□□□□ -1.29
PDGFC-202ENST00000422544 GINS3Q9BRX5 216 aa7.01□□□□□ -1.29
PDGFC-202ENST00000422544 TECRQ9NZ01 308 aaKnown RBP7.01□□□□□ -1.29
PDGFC-202ENST00000422544 SMPXQ9UHP9 88 aa7.01□□□□□ -1.29
PDGFC-202ENST00000422544 WI2-2373I1.2A0A1W2PRP0 233 aa7□□□□□ -1.29
PDGFC-202ENST00000422544 SMLR1H3BR10 107 aa7□□□□□ -1.29
PDGFC-202ENST00000422544 CHEK1O14757 476 aa7□□□□□ -1.29
PDGFC-202ENST00000422544 BAXQ07812 192 aa7□□□□□ -1.29
PDGFC-202ENST00000422544 FGL1Q08830 312 aa7□□□□□ -1.29
PDGFC-202ENST00000422544 USF2Q15853 346 aaPredicted RBP7□□□□□ -1.29
PDGFC-202ENST00000422544 ATP6V1FQ16864 119 aa7□□□□□ -1.29
PDGFC-202ENST00000422544 VWC2Q2TAL6 325 aa7□□□□□ -1.29
PDGFC-202ENST00000422544 TEPPQ6URK8 271 aa7□□□□□ -1.29
PDGFC-202ENST00000422544 CYP2G1PQ6ZSU1 146 aa7□□□□□ -1.29
PDGFC-202ENST00000422544 RNF125Q96EQ8 232 aa7□□□□□ -1.29
PDGFC-202ENST00000422544 METTL26Q96S19 204 aa7□□□□□ -1.29
PDGFC-202ENST00000422544 PBDC1Q9BVG4 233 aa7□□□□□ -1.29
PDGFC-202ENST00000422544 TMEM147Q9BVK8 224 aa7□□□□□ -1.29
PDGFC-202ENST00000422544 RHPN1-AS1Q9BWJ2 59 aa7□□□□□ -1.29
PDGFC-202ENST00000422544 UQCC1Q9NVA1 299 aa7□□□□□ -1.29
PDGFC-202ENST00000422544 LSM4Q9Y4Z0 139 aaKnown RBP7□□□□□ -1.29
PDGFC-202ENST00000422544 LYSTQ99698 3801 aa7□□□□□ -1.29
PDGFC-202ENST00000422544 hCG_2014768A0A024R1R8 64 aa6.99□□□□□ -1.29
PDGFC-202ENST00000422544 UBE2L5PA0A1B0GUS4 154 aa6.99□□□□□ -1.29
PDGFC-202ENST00000422544 AGPAT2O15120 278 aa6.99□□□□□ -1.29
PDGFC-202ENST00000422544 CRYBB3P26998 211 aa6.99□□□□□ -1.29
PDGFC-202ENST00000422544 LYZP61626 148 aa6.99□□□□□ -1.29
PDGFC-202ENST00000422544 CLINT1Q14677 625 aa6.99□□□□□ -1.29
PDGFC-202ENST00000422544 TMEM61Q8N0U2 210 aa6.99□□□□□ -1.29
PDGFC-202ENST00000422544 OR2K2Q8NGT1 345 aa6.99□□□□□ -1.29
PDGFC-202ENST00000422544 ST8SIA2Q92186 375 aa6.99□□□□□ -1.29
PDGFC-202ENST00000422544 PRR25Q96S07 402 aa6.99□□□□□ -1.29
PDGFC-202ENST00000422544 RNF2Q99496 336 aa6.99□□□□□ -1.29
PDGFC-202ENST00000422544 MGST2Q99735 147 aa6.99□□□□□ -1.29
PDGFC-202ENST00000422544 SMIM3Q9BZL3 60 aa6.99□□□□□ -1.29
PDGFC-202ENST00000422544 AURKAIP1Q9NWT8 199 aaPredicted RBP6.99□□□□□ -1.29
PDGFC-202ENST00000422544 ZMAT5Q9UDW3 170 aaKnown RBP6.99□□□□□ -1.29
PDGFC-202ENST00000422544 RABAC1Q9UI14 185 aa6.99□□□□□ -1.29
PDGFC-202ENST00000422544 SLC45A2Q9UMX9 530 aa6.99□□□□□ -1.29
PDGFC-202ENST00000422544 WDR83OSQ9Y284 106 aa6.99□□□□□ -1.29
PDGFC-202ENST00000422544 ZNF256Q9Y2P7 627 aaPredicted RBP6.99□□□□□ -1.29
PDGFC-202ENST00000422544 HSPB11Q9Y547 144 aa6.99□□□□□ -1.29
PDGFC-202ENST00000422544 HUWE1Q7Z6Z7 4374 aaKnown RBP6.99□□□□□ -1.29
PDGFC-202ENST00000422544 FXYD6-FXYD2A0A087WZ82 144 aa6.98□□□□□ -1.29
PDGFC-202ENST00000422544 A0A1W2PS18 150 aa6.98□□□□□ -1.29
PDGFC-202ENST00000422544 ZNF785A8K8V0 405 aa6.98□□□□□ -1.29
PDGFC-202ENST00000422544 G3V3Q6 166 aa6.98□□□□□ -1.29
PDGFC-202ENST00000422544 CFDP00746 253 aaPredicted RBP6.98□□□□□ -1.29
PDGFC-202ENST00000422544 HNRNPCP07910 306 aaKnown RBP eCLIP6.98□□□□□ -1.29
PDGFC-202ENST00000422544 GP9P14770 177 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 155.6 ms