RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 PSG1P11464 419 aa9.74□□□□□ -0.85
PTPRF-205ENST00000414879 GATA2P23769 480 aaPredicted RBP9.74□□□□□ -0.85
PTPRF-205ENST00000414879 MYO7BQ6PIF6 2116 aa9.74□□□□□ -0.85
PTPRF-205ENST00000414879 GTF2H5Q6ZYL4 71 aa9.74□□□□□ -0.85
PTPRF-205ENST00000414879 ORMDL3Q8N138 153 aa9.74□□□□□ -0.85
PTPRF-205ENST00000414879 NEUROG1Q92886 237 aa9.74□□□□□ -0.85
PTPRF-205ENST00000414879 TMEM14BQ9NUH8 114 aa9.74□□□□□ -0.85
PTPRF-205ENST00000414879 TECTAO75443 2155 aa9.74□□□□□ -0.85
PTPRF-205ENST00000414879 POU2AF1Q16633 256 aa9.74□□□□□ -0.85
PTPRF-205ENST00000414879 ZNF841Q6ZN19 808 aa9.74□□□□□ -0.85
PTPRF-205ENST00000414879 TMEM183AQ8IXX5 376 aa9.74□□□□□ -0.85
PTPRF-205ENST00000414879 PRELID3AQ96N28 172 aa9.74□□□□□ -0.85
PTPRF-205ENST00000414879 TBX15Q96SF7 602 aa9.74□□□□□ -0.85
PTPRF-205ENST00000414879 YPEL3P61236 119 aaPredicted RBP9.74□□□□□ -0.85
PTPRF-205ENST00000414879 CIRBPQ14011 172 aaKnown RBP9.74□□□□□ -0.85
PTPRF-205ENST00000414879 FBXL19-AS1Q494R0 122 aa9.74□□□□□ -0.85
PTPRF-205ENST00000414879 ZNF585BQ52M93 769 aa9.74□□□□□ -0.85
PTPRF-205ENST00000414879 RNF144BQ7Z419 303 aa9.74□□□□□ -0.85
PTPRF-205ENST00000414879 LINC00477Q96M19 166 aa9.74□□□□□ -0.85
PTPRF-205ENST00000414879 MIEN1Q9BRT3 115 aa9.74□□□□□ -0.85
PTPRF-205ENST00000414879 SLC25A39Q9BZJ4 359 aaPredicted RBP9.74□□□□□ -0.85
PTPRF-205ENST00000414879 ZNF207O43670 478 aaKnown RBP9.73□□□□□ -0.85
PTPRF-205ENST00000414879 NTF4P34130 210 aa9.73□□□□□ -0.85
PTPRF-205ENST00000414879 KLRD1Q13241 179 aa9.73□□□□□ -0.85
PTPRF-205ENST00000414879 RNF166Q96A37 237 aaPredicted RBP9.73□□□□□ -0.85
PTPRF-205ENST00000414879 NEU1Q99519 415 aa9.73□□□□□ -0.85
PTPRF-205ENST00000414879 ZNF407Q9C0G0 2248 aa9.73□□□□□ -0.85
PTPRF-205ENST00000414879 IGHV3OR16-13A0A075B7E8 117 aa9.73□□□□□ -0.85
PTPRF-205ENST00000414879 IGHV3-74A0A0B4J1X5 117 aa9.73□□□□□ -0.85
PTPRF-205ENST00000414879 TRAV34A0A0B4J273 112 aa9.73□□□□□ -0.85
PTPRF-205ENST00000414879 C12orf54Q6X4T0 127 aa9.73□□□□□ -0.85
PTPRF-205ENST00000414879 A0A087X0M5 115 aa9.73□□□□□ -0.85
PTPRF-205ENST00000414879 IGKV1-6A0A0C4DH72 117 aa9.73□□□□□ -0.85
PTPRF-205ENST00000414879 A0A1B0GX30 115 aa9.73□□□□□ -0.85
PTPRF-205ENST00000414879 CBY3A6NI87 242 aa9.73□□□□□ -0.85
PTPRF-205ENST00000414879 C15orf62A8K5M9 175 aa9.73□□□□□ -0.85
PTPRF-205ENST00000414879 AGMATQ9BSE5 352 aa9.73□□□□□ -0.85
PTPRF-205ENST00000414879 S4R3C0 116 aa9.73□□□□□ -0.85
PTPRF-205ENST00000414879 REC114Q7Z4M0 266 aa9.73□□□□□ -0.85
PTPRF-205ENST00000414879 WDR86Q86TI4 376 aa9.73□□□□□ -0.85
PTPRF-205ENST00000414879 TMEM101Q96IK0 257 aa9.73□□□□□ -0.85
PTPRF-205ENST00000414879 CACNA1BQ00975 2339 aa9.72□□□□□ -0.85
PTPRF-205ENST00000414879 PHF3Q92576 2039 aaKnown RBP9.72□□□□□ -0.85
PTPRF-205ENST00000414879 M0R3E3 92 aa9.72□□□□□ -0.85
PTPRF-205ENST00000414879 CD24P25063 80 aa9.72□□□□□ -0.85
PTPRF-205ENST00000414879 GTSCR1Q86UQ5 136 aa9.72□□□□□ -0.85
PTPRF-205ENST00000414879 LINC01587Q99440 93 aa9.72□□□□□ -0.85
PTPRF-205ENST00000414879 MGST2Q99735 147 aa9.72□□□□□ -0.85
PTPRF-205ENST00000414879 Q5PR19 223 aa9.72□□□□□ -0.85
PTPRF-205ENST00000414879 DMRTC2Q8IXT2 367 aaPredicted RBP9.72□□□□□ -0.85
PTPRF-205ENST00000414879 OR1N2Q8NGR9 330 aa9.72□□□□□ -0.85
PTPRF-205ENST00000414879 RFNGQ9Y644 331 aa9.72□□□□□ -0.85
PTPRF-205ENST00000414879 C17orf58Q2M2W7 97 aa9.72□□□□□ -0.85
PTPRF-205ENST00000414879 ZNF318Q5VUA4 2279 aa9.72□□□□□ -0.85
PTPRF-205ENST00000414879 IGHV3-49A0A0A0MS15 119 aa9.72□□□□□ -0.85
PTPRF-205ENST00000414879 ZNF503-AS2A6NEH8 195 aa9.72□□□□□ -0.85
PTPRF-205ENST00000414879 H3BUA1 57 aa9.72□□□□□ -0.85
PTPRF-205ENST00000414879 WT1P19544 449 aaPredicted RBP9.72□□□□□ -0.85
PTPRF-205ENST00000414879 DAZAP2Q15038 168 aaPredicted RBP9.72□□□□□ -0.85
PTPRF-205ENST00000414879 TSKUQ8WUA8 353 aa9.72□□□□□ -0.85
PTPRF-205ENST00000414879 C1QTNF4Q9BXJ3 329 aa9.72□□□□□ -0.85
PTPRF-205ENST00000414879 DOCK9Q9BZ29 2069 aa9.72□□□□□ -0.85
PTPRF-205ENST00000414879 ZNF98A6NK75 572 aa9.71□□□□□ -0.85
PTPRF-205ENST00000414879 C15orf65H3BRN8 121 aa9.71□□□□□ -0.85
PTPRF-205ENST00000414879 SRD5A1P18405 259 aa9.71□□□□□ -0.85
PTPRF-205ENST00000414879 C10orf55Q5SWW7 151 aa9.71□□□□□ -0.85
PTPRF-205ENST00000414879 UQCR10Q9UDW1 63 aa9.71□□□□□ -0.85
PTPRF-205ENST00000414879 WISP1O95388 367 aa9.71□□□□□ -0.85
PTPRF-205ENST00000414879 C1orf194Q5T5A4 169 aa9.71□□□□□ -0.85
PTPRF-205ENST00000414879 GNB1LQ9BYB4 327 aa9.71□□□□□ -0.85
PTPRF-205ENST00000414879 NDUFA4L2Q9NRX3 87 aa9.71□□□□□ -0.85
PTPRF-205ENST00000414879 NXT2Q9NPJ8 142 aaKnown RBP9.71□□□□□ -0.86
PTPRF-205ENST00000414879 PLXND1Q9Y4D7 1925 aa9.71□□□□□ -0.86
PTPRF-205ENST00000414879 SHISA9B4DS77 424 aa9.71□□□□□ -0.86
PTPRF-205ENST00000414879 NDUFS6O75380 124 aaKnown RBP9.71□□□□□ -0.86
PTPRF-205ENST00000414879 AMBPP02760 352 aa9.71□□□□□ -0.86
PTPRF-205ENST00000414879 ALKBH7Q9BT30 221 aaPredicted RBP9.71□□□□□ -0.86
PTPRF-205ENST00000414879 PEF1Q9UBV8 284 aaKnown RBP9.71□□□□□ -0.86
PTPRF-205ENST00000414879 IGHV3-66A0A0C4DH42 116 aa9.7□□□□□ -0.86
PTPRF-205ENST00000414879 NPIPB5A8MRT5 1133 aa9.7□□□□□ -0.86
PTPRF-205ENST00000414879 LRRK1Q38SD2 2015 aa9.7□□□□□ -0.86
PTPRF-205ENST00000414879 DIDO1Q9BTC0 2240 aaKnown RBP9.7□□□□□ -0.86
PTPRF-205ENST00000414879 GEMIN7Q9H840 131 aaKnown RBP9.7□□□□□ -0.86
PTPRF-205ENST00000414879 HIGD1CA8MV81 97 aa9.7□□□□□ -0.86
PTPRF-205ENST00000414879 RNASE4P34096 147 aaKnown RBP9.7□□□□□ -0.86
PTPRF-205ENST00000414879 FOXL1Q12952 345 aa9.7□□□□□ -0.86
PTPRF-205ENST00000414879 RPP25LQ8N5L8 163 aaKnown RBP9.7□□□□□ -0.86
PTPRF-205ENST00000414879 COL6A6A6NMZ7 2263 aa9.7□□□□□ -0.86
PTPRF-205ENST00000414879 TRAV3A0A0B4J244 114 aa9.7□□□□□ -0.86
PTPRF-205ENST00000414879 M0R381 172 aa9.7□□□□□ -0.86
PTPRF-205ENST00000414879 COX6CP09669 75 aa9.7□□□□□ -0.86
PTPRF-205ENST00000414879 PYYP10082 97 aa9.7□□□□□ -0.86
PTPRF-205ENST00000414879 JOSD1Q15040 202 aaPredicted RBP9.7□□□□□ -0.86
PTPRF-205ENST00000414879 FAM74A4Q5TZK3 123 aa9.7□□□□□ -0.86
PTPRF-205ENST00000414879 OR4C5Q8NGB2 326 aa9.7□□□□□ -0.86
PTPRF-205ENST00000414879 C2orf88Q9BSF0 95 aa9.7□□□□□ -0.86
PTPRF-205ENST00000414879 MRPS16Q9Y3D3 137 aaKnown RBP9.7□□□□□ -0.86
PTPRF-205ENST00000414879 FER1L5A0AVI2 2057 aa9.7□□□□□ -0.86
PTPRF-205ENST00000414879 TRBV24-1A0A075B6N3 115 aa9.7□□□□□ -0.86
PTPRF-205ENST00000414879 SPOCK3Q9BQ16 436 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms