RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 STOML3Q8TAV4 291 aa2.99□□□□□ -1.93
HMGB3P18-201ENST00000406327 LINC01560Q8TB33 94 aa2.99□□□□□ -1.93
HMGB3P18-201ENST00000406327 ADTRPQ96IZ2 230 aa2.99□□□□□ -1.93
HMGB3P18-201ENST00000406327 OR10C1Q96KK4 312 aa2.99□□□□□ -1.93
HMGB3P18-201ENST00000406327 ZNF75AQ96N20 296 aa2.99□□□□□ -1.93
HMGB3P18-201ENST00000406327 ZNF2Q9BSG1 426 aaPredicted RBP2.99□□□□□ -1.93
HMGB3P18-201ENST00000406327 METTL8Q9H825 291 aaKnown RBP2.99□□□□□ -1.93
HMGB3P18-201ENST00000406327 C8orf17Q9NRJ1 99 aa2.99□□□□□ -1.93
HMGB3P18-201ENST00000406327 RASL12Q9NYN1 266 aa2.99□□□□□ -1.93
HMGB3P18-201ENST00000406327 TRIOO75962 3097 aa2.99□□□□□ -1.93
HMGB3P18-201ENST00000406327 PRUNE2Q8WUY3 3088 aa2.99□□□□□ -1.93
HMGB3P18-201ENST00000406327 EML5Q05BV3 1969 aa2.99□□□□□ -1.93
HMGB3P18-201ENST00000406327 IGLV4-60A0A075B6I1 120 aa2.98□□□□□ -1.93
HMGB3P18-201ENST00000406327 IGHV3-49A0A0A0MS15 119 aa2.98□□□□□ -1.93
HMGB3P18-201ENST00000406327 TRAPPC2LH3BP13 241 aa2.98□□□□□ -1.93
HMGB3P18-201ENST00000406327 K7EN84 100 aa2.98□□□□□ -1.93
HMGB3P18-201ENST00000406327 OR7C1O76099 320 aaPredicted RBP2.98□□□□□ -1.93
HMGB3P18-201ENST00000406327 IFNA21P01568 189 aa2.98□□□□□ -1.93
HMGB3P18-201ENST00000406327 PET100P0DJ07 73 aa2.98□□□□□ -1.93
HMGB3P18-201ENST00000406327 ZNF728P0DKX0 622 aa2.98□□□□□ -1.93
HMGB3P18-201ENST00000406327 TPT1P13693 172 aaKnown RBP2.98□□□□□ -1.93
HMGB3P18-201ENST00000406327 HAAOP46952 286 aa2.98□□□□□ -1.93
HMGB3P18-201ENST00000406327 PIGPP57054 158 aa2.98□□□□□ -1.93
HMGB3P18-201ENST00000406327 FGF12P61328 243 aa2.98□□□□□ -1.93
HMGB3P18-201ENST00000406327 ABCA11PQ4W5N1 156 aa2.98□□□□□ -1.93
HMGB3P18-201ENST00000406327 TTC32Q5I0X7 151 aa2.98□□□□□ -1.93
HMGB3P18-201ENST00000406327 FAM74A1Q5RGS3 127 aa2.98□□□□□ -1.93
HMGB3P18-201ENST00000406327 Q6ZS49 121 aa2.98□□□□□ -1.93
HMGB3P18-201ENST00000406327 Q6ZVH6 145 aa2.98□□□□□ -1.93
HMGB3P18-201ENST00000406327 DEFB124Q8NES8 71 aa2.98□□□□□ -1.93
HMGB3P18-201ENST00000406327 SLC30A7Q8NEW0 376 aa2.98□□□□□ -1.93
HMGB3P18-201ENST00000406327 OR5P3Q8WZ94 311 aa2.98□□□□□ -1.93
HMGB3P18-201ENST00000406327 STARD4Q96DR4 205 aa2.98□□□□□ -1.93
HMGB3P18-201ENST00000406327 AQP10Q96PS8 301 aa2.98□□□□□ -1.93
HMGB3P18-201ENST00000406327 C20orf144Q9BQM9 153 aa2.98□□□□□ -1.93
HMGB3P18-201ENST00000406327 ZNF471Q9BX82 626 aaPredicted RBP2.98□□□□□ -1.93
HMGB3P18-201ENST00000406327 SUCNR1Q9BXA5 334 aa2.98□□□□□ -1.93
HMGB3P18-201ENST00000406327 C1QTNF6Q9BXI9 259 aa2.98□□□□□ -1.93
HMGB3P18-201ENST00000406327 NAA60Q9H7X0 242 aa2.98□□□□□ -1.93
HMGB3P18-201ENST00000406327 ZNF286AQ9HBT8 521 aa2.98□□□□□ -1.93
HMGB3P18-201ENST00000406327 ASCL3Q9NQ33 180 aa2.98□□□□□ -1.93
HMGB3P18-201ENST00000406327 C12orf4Q9NQ89 552 aa2.98□□□□□ -1.93
HMGB3P18-201ENST00000406327 CYTL1Q9NRR1 136 aa2.98□□□□□ -1.93
HMGB3P18-201ENST00000406327 TMEM100Q9NV29 134 aa2.98□□□□□ -1.93
HMGB3P18-201ENST00000406327 OR5AC2Q9NZP5 309 aa2.98□□□□□ -1.93
HMGB3P18-201ENST00000406327 GSKIPQ9P0R6 139 aa2.98□□□□□ -1.93
HMGB3P18-201ENST00000406327 MPC1Q9Y5U8 109 aa2.98□□□□□ -1.93
HMGB3P18-201ENST00000406327 ASXL3Q9C0F0 2248 aa2.98□□□□□ -1.93
HMGB3P18-201ENST00000406327 TNRC6BQ9UPQ9 1833 aaKnown RBP2.98□□□□□ -1.93
HMGB3P18-201ENST00000406327 RP1P56715 2156 aa2.97□□□□□ -1.93
HMGB3P18-201ENST00000406327 IGKV2D-24A0A075B6R9 120 aa2.97□□□□□ -1.93
HMGB3P18-201ENST00000406327 SPAARA0A1B0GVQ0 90 aa2.97□□□□□ -1.93
HMGB3P18-201ENST00000406327 FGF16O43320 207 aa2.97□□□□□ -1.93
HMGB3P18-201ENST00000406327 ZNF207O43670 478 aaKnown RBP2.97□□□□□ -1.93
HMGB3P18-201ENST00000406327 SYNGR1O43759 233 aa2.97□□□□□ -1.93
HMGB3P18-201ENST00000406327 DEDDO75618 318 aa2.97□□□□□ -1.93
HMGB3P18-201ENST00000406327 NAPSAO96009 420 aa2.97□□□□□ -1.93
HMGB3P18-201ENST00000406327 PPYP01298 95 aa2.97□□□□□ -1.93
HMGB3P18-201ENST00000406327 CTXN2P0C2S0 81 aa2.97□□□□□ -1.93
HMGB3P18-201ENST00000406327 OR5AC1P0C628 307 aa2.97□□□□□ -1.93
HMGB3P18-201ENST00000406327 ZNF14P17017 642 aaPredicted RBP2.97□□□□□ -1.93
HMGB3P18-201ENST00000406327 FXYD4P59646 89 aa2.97□□□□□ -1.93
HMGB3P18-201ENST00000406327 GNG3P63215 75 aa2.97□□□□□ -1.93
HMGB3P18-201ENST00000406327 SRSF6Q13247 344 aaKnown RBP2.97□□□□□ -1.93
HMGB3P18-201ENST00000406327 GUSBP1Q15486 140 aa2.97□□□□□ -1.93
HMGB3P18-201ENST00000406327 TBC1D28Q2M2D7 210 aa2.97□□□□□ -1.93
HMGB3P18-201ENST00000406327 MPV17LQ2QL34 196 aa2.97□□□□□ -1.93
HMGB3P18-201ENST00000406327 IAH1Q2TAA2 248 aaPredicted RBP2.97□□□□□ -1.93
HMGB3P18-201ENST00000406327 SP6Q3SY56 376 aa2.97□□□□□ -1.93
HMGB3P18-201ENST00000406327 C5orf47Q569G3 176 aa2.97□□□□□ -1.93
HMGB3P18-201ENST00000406327 OR2T2Q6IF00 324 aa2.97□□□□□ -1.93
HMGB3P18-201ENST00000406327 HAGHLQ6PII5 290 aaPredicted RBP2.97□□□□□ -1.93
HMGB3P18-201ENST00000406327 LYZL2Q7Z4W2 148 aa2.97□□□□□ -1.93
HMGB3P18-201ENST00000406327 LINC00596Q86U02 117 aa2.97□□□□□ -1.93
HMGB3P18-201ENST00000406327 BAP18Q8IXM2 172 aa2.97□□□□□ -1.93
HMGB3P18-201ENST00000406327 FDCSPQ8NFU4 85 aa2.97□□□□□ -1.93
HMGB3P18-201ENST00000406327 SUN5Q8TC36 379 aa2.97□□□□□ -1.93
HMGB3P18-201ENST00000406327 RTN4IP1Q8WWV3 396 aaPredicted RBP2.97□□□□□ -1.93
HMGB3P18-201ENST00000406327 FRZBQ92765 325 aa2.97□□□□□ -1.93
HMGB3P18-201ENST00000406327 LINC00052Q96N35 136 aa2.97□□□□□ -1.93
HMGB3P18-201ENST00000406327 OR51I2Q9H344 312 aa2.97□□□□□ -1.93
HMGB3P18-201ENST00000406327 RHOFQ9HBH0 211 aa2.97□□□□□ -1.93
HMGB3P18-201ENST00000406327 SPACA1Q9HBV2 294 aa2.97□□□□□ -1.93
HMGB3P18-201ENST00000406327 SLC2A9Q9NRM0 540 aa2.97□□□□□ -1.93
HMGB3P18-201ENST00000406327 GLS2Q9UI32 602 aa2.97□□□□□ -1.93
HMGB3P18-201ENST00000406327 LAMA1P25391 3075 aa2.97□□□□□ -1.93
HMGB3P18-201ENST00000406327 UNC13CQ8NB66 2214 aa2.97□□□□□ -1.93
HMGB3P18-201ENST00000406327 CEP192Q8TEP8 1941 aa2.97□□□□□ -1.93
HMGB3P18-201ENST00000406327 DNAH14Q0VDD8 3507 aa2.96□□□□□ -1.94
HMGB3P18-201ENST00000406327 IGHV6-1A0A0B4J1U7 121 aa2.96□□□□□ -1.94
HMGB3P18-201ENST00000406327 TRAV17A0A0B4J275 112 aa2.96□□□□□ -1.94
HMGB3P18-201ENST00000406327 IGKV1-6A0A0C4DH72 117 aa2.96□□□□□ -1.94
HMGB3P18-201ENST00000406327 KIR2DS1A0A191URI9 304 aa2.96□□□□□ -1.94
HMGB3P18-201ENST00000406327 C3orf85A0A1B0GTC6 90 aa2.96□□□□□ -1.94
HMGB3P18-201ENST00000406327 RNASEK-C17orf49H0YIS7 233 aa2.96□□□□□ -1.94
HMGB3P18-201ENST00000406327 K7EPK0 472 aa2.96□□□□□ -1.94
HMGB3P18-201ENST00000406327 DEGS1O15121 323 aa2.96□□□□□ -1.94
HMGB3P18-201ENST00000406327 NDUFS5O43920 106 aa2.96□□□□□ -1.94
HMGB3P18-201ENST00000406327 CDS2O95674 445 aa2.96□□□□□ -1.94
HMGB3P18-201ENST00000406327 SCTP09683 121 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms