RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 IFI27L2Q9H2X8 130 aa3.28□□□□□ -1.88
HMGB3P19-201ENST00000403971 VCX2Q9H322 139 aa3.28□□□□□ -1.88
HMGB3P19-201ENST00000403971 MMP26Q9NRE1 261 aa3.28□□□□□ -1.88
HMGB3P19-201ENST00000403971 CCL28Q9NRJ3 127 aa3.28□□□□□ -1.88
HMGB3P19-201ENST00000403971 SLC2A9Q9NRM0 540 aa3.28□□□□□ -1.88
HMGB3P19-201ENST00000403971 SDHAF2Q9NX18 166 aa3.28□□□□□ -1.88
HMGB3P19-201ENST00000403971 SHPKQ9UHJ6 478 aa3.28□□□□□ -1.88
HMGB3P19-201ENST00000403971 FLVCR2Q9UPI3 526 aa3.28□□□□□ -1.88
HMGB3P19-201ENST00000403971 TBL2Q9Y4P3 447 aaKnown RBP3.28□□□□□ -1.88
HMGB3P19-201ENST00000403971 AMMECR1Q9Y4X0 333 aaPredicted RBP3.28□□□□□ -1.88
HMGB3P19-201ENST00000403971 RBM7Q9Y580 266 aaKnown RBP3.28□□□□□ -1.88
HMGB3P19-201ENST00000403971 MINOS1-NBL1R4GNA1 71 aa3.28□□□□□ -1.88
HMGB3P19-201ENST00000403971 SONP18583 2426 aaKnown RBP3.28□□□□□ -1.89
HMGB3P19-201ENST00000403971 TRAV26-1A0A087WT03 109 aa3.27□□□□□ -1.89
HMGB3P19-201ENST00000403971 DUXBA0A1W2PPF3 345 aa3.27□□□□□ -1.89
HMGB3P19-201ENST00000403971 C9orf170A2RU37 121 aa3.27□□□□□ -1.89
HMGB3P19-201ENST00000403971 LEUTXA8MZ59 168 aa3.27□□□□□ -1.89
HMGB3P19-201ENST00000403971 H0Y980 276 aa3.27□□□□□ -1.89
HMGB3P19-201ENST00000403971 RNASEK-C17orf49H0YIS7 233 aa3.27□□□□□ -1.89
HMGB3P19-201ENST00000403971 LY6LH3BQJ8 138 aa3.27□□□□□ -1.89
HMGB3P19-201ENST00000403971 BUB1B-PAK6H3BSN5 160 aa3.27□□□□□ -1.89
HMGB3P19-201ENST00000403971 HSD17B6O14756 317 aa3.27□□□□□ -1.89
HMGB3P19-201ENST00000403971 SLC31A2O15432 143 aa3.27□□□□□ -1.89
HMGB3P19-201ENST00000403971 CREBL2O60519 120 aaPredicted RBP3.27□□□□□ -1.89
HMGB3P19-201ENST00000403971 RAMP3O60896 148 aa3.27□□□□□ -1.89
HMGB3P19-201ENST00000403971 PGLYRP1O75594 196 aaPredicted RBP3.27□□□□□ -1.89
HMGB3P19-201ENST00000403971 SFT2D2O95562 160 aa3.27□□□□□ -1.89
HMGB3P19-201ENST00000403971 CDS2O95674 445 aa3.27□□□□□ -1.89
HMGB3P19-201ENST00000403971 OR4E1P0C645 316 aa3.27□□□□□ -1.89
HMGB3P19-201ENST00000403971 TRAPPC2P0DI81 140 aa3.27□□□□□ -1.89
HMGB3P19-201ENST00000403971 TRAPPC2BP0DI82 140 aa3.27□□□□□ -1.89
HMGB3P19-201ENST00000403971 HLA-GP17693 338 aa3.27□□□□□ -1.89
HMGB3P19-201ENST00000403971 F2RP25116 425 aa3.27□□□□□ -1.89
HMGB3P19-201ENST00000403971 HTR1DP28221 377 aa3.27□□□□□ -1.89
HMGB3P19-201ENST00000403971 CEACAM3P40198 252 aa3.27□□□□□ -1.89
HMGB3P19-201ENST00000403971 SUPT4H1P63272 117 aaKnown RBP3.27□□□□□ -1.89
HMGB3P19-201ENST00000403971 FGL1Q08830 312 aa3.27□□□□□ -1.89
HMGB3P19-201ENST00000403971 ZNF816Q0VGE8 651 aaPredicted RBP3.27□□□□□ -1.89
HMGB3P19-201ENST00000403971 BAMBIQ13145 260 aa3.27□□□□□ -1.89
HMGB3P19-201ENST00000403971 PPP1R1AQ13522 171 aa3.27□□□□□ -1.89
HMGB3P19-201ENST00000403971 LTC4SQ16873 150 aa3.27□□□□□ -1.89
HMGB3P19-201ENST00000403971 CYB5R2Q6BCY4 276 aa3.27□□□□□ -1.89
HMGB3P19-201ENST00000403971 HCP5Q6MZN7 132 aa3.27□□□□□ -1.89
HMGB3P19-201ENST00000403971 SPNS3Q6ZMD2 512 aa3.27□□□□□ -1.89
HMGB3P19-201ENST00000403971 VMO1Q7Z5L0 202 aa3.27□□□□□ -1.89
HMGB3P19-201ENST00000403971 TMED4Q7Z7H5 227 aa3.27□□□□□ -1.89
HMGB3P19-201ENST00000403971 PNKDQ8N490 385 aa3.27□□□□□ -1.89
HMGB3P19-201ENST00000403971 ARL6IP6Q8N6S5 226 aa3.27□□□□□ -1.89
HMGB3P19-201ENST00000403971 WFDC11Q8NEX6 87 aa3.27□□□□□ -1.89
HMGB3P19-201ENST00000403971 OR4P4Q8NGL7 312 aa3.27□□□□□ -1.89
HMGB3P19-201ENST00000403971 OR10X1Q8NGY0 326 aa3.27□□□□□ -1.89
HMGB3P19-201ENST00000403971 ZNF431Q8TF32 576 aaPredicted RBP3.27□□□□□ -1.89
HMGB3P19-201ENST00000403971 GLYATL2Q8WU03 294 aa3.27□□□□□ -1.89
HMGB3P19-201ENST00000403971 MITD1Q8WV92 249 aa3.27□□□□□ -1.89
HMGB3P19-201ENST00000403971 CAPSLQ8WWF8 208 aa3.27□□□□□ -1.89
HMGB3P19-201ENST00000403971 ASB13Q8WXK3 278 aa3.27□□□□□ -1.89
HMGB3P19-201ENST00000403971 IL22RA2Q969J5 263 aa3.27□□□□□ -1.89
HMGB3P19-201ENST00000403971 HIST1H4GQ99525 98 aa3.27□□□□□ -1.89
HMGB3P19-201ENST00000403971 TMEM222Q9H0R3 208 aa3.27□□□□□ -1.89
HMGB3P19-201ENST00000403971 OR2D2Q9H210 308 aa3.27□□□□□ -1.89
HMGB3P19-201ENST00000403971 NAA60Q9H7X0 242 aa3.27□□□□□ -1.89
HMGB3P19-201ENST00000403971 SIRT7Q9NRC8 400 aa3.27□□□□□ -1.89
HMGB3P19-201ENST00000403971 HIVEP2P31629 2446 aa3.27□□□□□ -1.89
HMGB3P19-201ENST00000403971 IGHV1-69DA0A0B4J2H0 117 aa3.26□□□□□ -1.89
HMGB3P19-201ENST00000403971 CENPVL3A0A0U1RRI6 287 aa3.26□□□□□ -1.89
HMGB3P19-201ENST00000403971 C3orf85A0A1B0GTC6 90 aa3.26□□□□□ -1.89
HMGB3P19-201ENST00000403971 M0R1X1 148 aa3.26□□□□□ -1.89
HMGB3P19-201ENST00000403971 ATG12O94817 140 aa3.26□□□□□ -1.89
HMGB3P19-201ENST00000403971 IGHV1-69P01742 117 aa3.26□□□□□ -1.89
HMGB3P19-201ENST00000403971 HLA-AP01891 365 aaKnown RBP3.26□□□□□ -1.89
HMGB3P19-201ENST00000403971 GAPDHP04406 335 aaKnown RBP3.26□□□□□ -1.89
HMGB3P19-201ENST00000403971 OR5AC1P0C628 307 aa3.26□□□□□ -1.89
HMGB3P19-201ENST00000403971 SAA2P0DJI9 122 aaPredicted RBP3.26□□□□□ -1.89
HMGB3P19-201ENST00000403971 CT45A6P0DMU7 189 aa3.26□□□□□ -1.89
HMGB3P19-201ENST00000403971 CT45A5P0DMU8 189 aa3.26□□□□□ -1.89
HMGB3P19-201ENST00000403971 CT45A7P0DMV0 189 aa3.26□□□□□ -1.89
HMGB3P19-201ENST00000403971 AKR1C4P17516 323 aa3.26□□□□□ -1.89
HMGB3P19-201ENST00000403971 GNG10P50151 68 aa3.26□□□□□ -1.89
HMGB3P19-201ENST00000403971 DYNLT3P51808 116 aa3.26□□□□□ -1.89
HMGB3P19-201ENST00000403971 RAB25P57735 213 aa3.26□□□□□ -1.89
HMGB3P19-201ENST00000403971 RRAS2P62070 204 aaPredicted RBP3.26□□□□□ -1.89
HMGB3P19-201ENST00000403971 RPL30P62888 115 aaKnown RBP3.26□□□□□ -1.89
HMGB3P19-201ENST00000403971 POU2AF1Q16633 256 aa3.26□□□□□ -1.89
HMGB3P19-201ENST00000403971 GPR157Q5UAW9 335 aa3.26□□□□□ -1.89
HMGB3P19-201ENST00000403971 UQCC3Q6UW78 93 aa3.26□□□□□ -1.89
HMGB3P19-201ENST00000403971 TGIF2LXQ8IUE1 241 aa3.26□□□□□ -1.89
HMGB3P19-201ENST00000403971 LGI3Q8N145 548 aa3.26□□□□□ -1.89
HMGB3P19-201ENST00000403971 C12orf45Q8N5I9 185 aaPredicted RBP3.26□□□□□ -1.89
HMGB3P19-201ENST00000403971 COQ8AQ8NI60 647 aa3.26□□□□□ -1.89
HMGB3P19-201ENST00000403971 ARPC1AQ92747 370 aa3.26□□□□□ -1.89
HMGB3P19-201ENST00000403971 LEAP2Q969E1 77 aa3.26□□□□□ -1.89
HMGB3P19-201ENST00000403971 RPEQ96AT9 228 aa3.26□□□□□ -1.89
HMGB3P19-201ENST00000403971 MALSU1Q96EH3 234 aa3.26□□□□□ -1.89
HMGB3P19-201ENST00000403971 TMEM56Q96MV1 263 aa3.26□□□□□ -1.89
HMGB3P19-201ENST00000403971 RBM14Q96PK6 669 aaKnown RBP3.26□□□□□ -1.89
HMGB3P19-201ENST00000403971 PHB2Q99623 299 aa3.26□□□□□ -1.89
HMGB3P19-201ENST00000403971 RNF5Q99942 180 aa3.26□□□□□ -1.89
HMGB3P19-201ENST00000403971 NABP2Q9BQ15 211 aa3.26□□□□□ -1.89
HMGB3P19-201ENST00000403971 GON7Q9BXV9 100 aa3.26□□□□□ -1.89
HMGB3P19-201ENST00000403971 SLC25A22Q9H936 323 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 116.4 ms