RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 CTRLP40313 264 aa20.52■□□□□ 0.88
COL13A1-203ENST00000398969 TMEM155Q4W5P6 130 aa20.52■□□□□ 0.88
COL13A1-203ENST00000398969 FAM19A2Q8N3H0 131 aa20.52■□□□□ 0.88
COL13A1-203ENST00000398969 PERPQ96FX8 193 aa20.52■□□□□ 0.88
COL13A1-203ENST00000398969 MRPL27Q9P0M9 148 aaKnown RBP20.52■□□□□ 0.88
COL13A1-203ENST00000398969 SMG1Q96Q15 3661 aaKnown RBP20.52■□□□□ 0.88
COL13A1-203ENST00000398969 STXBP6Q8NFX7 210 aa20.51■□□□□ 0.87
COL13A1-203ENST00000398969 CHRDL1Q9BU40 450 aa20.51■□□□□ 0.87
COL13A1-203ENST00000398969 JKAMPQ9P055 326 aa20.51■□□□□ 0.87
COL13A1-203ENST00000398969 EPDR1Q9UM22 224 aa20.51■□□□□ 0.87
COL13A1-203ENST00000398969 C3orf79P0CE67 100 aa20.51■□□□□ 0.87
COL13A1-203ENST00000398969 LGALS7P47929 136 aa20.51■□□□□ 0.87
COL13A1-203ENST00000398969 PRRX1P54821 245 aa20.51■□□□□ 0.87
COL13A1-203ENST00000398969 PVRIGQ6DKI7 326 aa20.51■□□□□ 0.87
COL13A1-203ENST00000398969 ETFRF1Q6IPR1 90 aa20.51■□□□□ 0.87
COL13A1-203ENST00000398969 HCP5Q6MZN7 132 aa20.51■□□□□ 0.87
COL13A1-203ENST00000398969 OR1B1Q8NGR6 318 aa20.51■□□□□ 0.87
COL13A1-203ENST00000398969 IGHV3-72A0A0B4J1Y9 119 aa20.5■□□□□ 0.87
COL13A1-203ENST00000398969 ENSAO43768 121 aaKnown RBP20.5■□□□□ 0.87
COL13A1-203ENST00000398969 IGHV1-8P0DP01 117 aa20.5■□□□□ 0.87
COL13A1-203ENST00000398969 UBE2G1P62253 170 aa20.5■□□□□ 0.87
COL13A1-203ENST00000398969 BLNKQ8WV28 456 aa20.5■□□□□ 0.87
COL13A1-203ENST00000398969 SLC25A5P05141 298 aaKnown RBP20.5■□□□□ 0.87
COL13A1-203ENST00000398969 HIST1H1EP10412 219 aaKnown RBP20.5■□□□□ 0.87
COL13A1-203ENST00000398969 RBPJQ06330 500 aa20.5■□□□□ 0.87
COL13A1-203ENST00000398969 PCNX1Q96RV3 2341 aa20.49■□□□□ 0.87
COL13A1-203ENST00000398969 CORTO00230 105 aa20.49■□□□□ 0.87
COL13A1-203ENST00000398969 RNASE6Q93091 150 aaKnown RBP20.49■□□□□ 0.87
COL13A1-203ENST00000398969 KAAG1Q9UBP8 84 aa20.49■□□□□ 0.87
COL13A1-203ENST00000398969 ZNF25P17030 456 aaPredicted RBP20.48■□□□□ 0.87
COL13A1-203ENST00000398969 NTF3P20783 257 aa20.48■□□□□ 0.87
COL13A1-203ENST00000398969 SPATA45Q537H7 98 aa20.48■□□□□ 0.87
COL13A1-203ENST00000398969 C19orf35Q6ZS72 473 aa20.48■□□□□ 0.87
COL13A1-203ENST00000398969 LHFPL4Q7Z7J7 247 aa20.48■□□□□ 0.87
COL13A1-203ENST00000398969 TRGV9Q99603 122 aa20.48■□□□□ 0.87
COL13A1-203ENST00000398969 KLF12Q9Y4X4 402 aa20.48■□□□□ 0.87
COL13A1-203ENST00000398969 PGPA6NDG6 321 aa20.48■□□□□ 0.87
COL13A1-203ENST00000398969 HIGD1CA8MV81 97 aa20.48■□□□□ 0.87
COL13A1-203ENST00000398969 C11orf42Q8N5U0 333 aa20.48■□□□□ 0.87
COL13A1-203ENST00000398969 SGK494Q96LW2 274 aa20.48■□□□□ 0.87
COL13A1-203ENST00000398969 TEX45Q8NA69 505 aa20.47■□□□□ 0.87
COL13A1-203ENST00000398969 TMEM133Q9H2Q1 129 aa20.47■□□□□ 0.87
COL13A1-203ENST00000398969 A6NNC1 897 aa20.46■□□□□ 0.87
COL13A1-203ENST00000398969 VWC2LB2RUY7 222 aa20.46■□□□□ 0.87
COL13A1-203ENST00000398969 KLF5Q13887 457 aaPredicted RBP20.46■□□□□ 0.87
COL13A1-203ENST00000398969 BORCS7Q96B45 105 aa20.46■□□□□ 0.87
COL13A1-203ENST00000398969 SMIM12Q96EX1 92 aa20.46■□□□□ 0.87
COL13A1-203ENST00000398969 OR2J3O76001 311 aa20.46■□□□□ 0.87
COL13A1-203ENST00000398969 NBEAP1P0C6P0 100 aa20.46■□□□□ 0.87
COL13A1-203ENST00000398969 RPL27AP46776 148 aaKnown RBP20.46■□□□□ 0.87
COL13A1-203ENST00000398969 TNXAQ16473 311 aa20.46■□□□□ 0.87
COL13A1-203ENST00000398969 TMEM116Q8NCL8 245 aa20.46■□□□□ 0.87
COL13A1-203ENST00000398969 C22orf15Q8WYQ4 148 aa20.46■□□□□ 0.87
COL13A1-203ENST00000398969 GPR82Q96P67 336 aa20.46■□□□□ 0.87
COL13A1-203ENST00000398969 APELAP0DMC3 54 aa20.45■□□□□ 0.86
COL13A1-203ENST00000398969 ALKBH7Q9BT30 221 aaPredicted RBP20.45■□□□□ 0.86
COL13A1-203ENST00000398969 SSBP4Q9BWG4 385 aaPredicted RBP20.45■□□□□ 0.86
COL13A1-203ENST00000398969 DYNLRB1Q9NP97 96 aa20.45■□□□□ 0.86
COL13A1-203ENST00000398969 RPH3ALQ9UNE2 315 aa20.45■□□□□ 0.86
COL13A1-203ENST00000398969 VSTM5A8MXK1 200 aa20.44■□□□□ 0.86
COL13A1-203ENST00000398969 CNTFRP26992 372 aa20.44■□□□□ 0.86
COL13A1-203ENST00000398969 ATP5L2Q7Z4Y8 100 aa20.44■□□□□ 0.86
COL13A1-203ENST00000398969 MLST8Q9BVC4 326 aa20.44■□□□□ 0.86
COL13A1-203ENST00000398969 PLXNB1O43157 2135 aa20.44■□□□□ 0.86
COL13A1-203ENST00000398969 A0A1B0GXF2 115 aa20.44■□□□□ 0.86
COL13A1-203ENST00000398969 HYPMO75409 117 aa20.44■□□□□ 0.86
COL13A1-203ENST00000398969 CRYGBP07316 175 aa20.44■□□□□ 0.86
COL13A1-203ENST00000398969 GP9P14770 177 aa20.44■□□□□ 0.86
COL13A1-203ENST00000398969 GPR6P46095 362 aaPredicted RBP20.44■□□□□ 0.86
COL13A1-203ENST00000398969 CAMPP49913 170 aa20.44■□□□□ 0.86
COL13A1-203ENST00000398969 VKORC1Q9BQB6 163 aa20.44■□□□□ 0.86
COL13A1-203ENST00000398969 ROS1P08922 2347 aa20.44■□□□□ 0.86
COL13A1-203ENST00000398969 IGHV3-21A0A0B4J1V1 117 aa20.43■□□□□ 0.86
COL13A1-203ENST00000398969 FOSL1P15407 271 aa20.43■□□□□ 0.86
COL13A1-203ENST00000398969 CA7P43166 264 aa20.43■□□□□ 0.86
COL13A1-203ENST00000398969 BATFQ16520 125 aa20.43■□□□□ 0.86
COL13A1-203ENST00000398969 WNT10AQ9GZT5 417 aa20.43■□□□□ 0.86
COL13A1-203ENST00000398969 TMEM208Q9BTX3 173 aa20.43■□□□□ 0.86
COL13A1-203ENST00000398969 HSBP1O75506 76 aa20.42■□□□□ 0.86
COL13A1-203ENST00000398969 CASP6P55212 293 aa20.42■□□□□ 0.86
COL13A1-203ENST00000398969 LINC00322Q6ZN03 302 aaPredicted RBP20.42■□□□□ 0.86
COL13A1-203ENST00000398969 SSX8Q7RTT4 187 aa20.42■□□□□ 0.86
COL13A1-203ENST00000398969 C5orf17Q8NAS9 161 aa20.42■□□□□ 0.86
COL13A1-203ENST00000398969 LPAR2Q9HBW0 351 aa20.42■□□□□ 0.86
COL13A1-203ENST00000398969 SHISA9B4DS77 424 aa20.42■□□□□ 0.86
COL13A1-203ENST00000398969 TOMM40O96008 361 aa20.42■□□□□ 0.86
COL13A1-203ENST00000398969 IGLC2P0DOY2 106 aa20.42■□□□□ 0.86
COL13A1-203ENST00000398969 IGLC3P0DOY3 106 aa20.42■□□□□ 0.86
COL13A1-203ENST00000398969 CLEC7AQ9BXN2 247 aa20.42■□□□□ 0.86
COL13A1-203ENST00000398969 RPP21Q9H633 154 aaKnown RBP20.42■□□□□ 0.86
COL13A1-203ENST00000398969 UQCR10Q9UDW1 63 aa20.42■□□□□ 0.86
COL13A1-203ENST00000398969 E7EQL1 145 aa20.41■□□□□ 0.86
COL13A1-203ENST00000398969 DLX1P56177 255 aa20.41■□□□□ 0.86
COL13A1-203ENST00000398969 FMC1Q96HJ9 113 aa20.41■□□□□ 0.86
COL13A1-203ENST00000398969 SIGLEC9Q9Y336 463 aa20.41■□□□□ 0.86
COL13A1-203ENST00000398969 LTAP01374 205 aa20.41■□□□□ 0.86
COL13A1-203ENST00000398969 PLP1P60201 277 aa20.41■□□□□ 0.86
COL13A1-203ENST00000398969 LEMD1Q68G75 181 aa20.41■□□□□ 0.86
COL13A1-203ENST00000398969 TCF24Q7RTU0 167 aa20.41■□□□□ 0.86
COL13A1-203ENST00000398969 C8orf46Q8TAG6 207 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms